RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 GOLIM4O00461 696 aa16.78■□□□□ 0.28
CCDC178-201ENST00000300227 PDE8BO95263 885 aa16.78■□□□□ 0.28
CCDC178-201ENST00000300227 CCDC158Q5M9N0 1113 aa16.78■□□□□ 0.28
CCDC178-201ENST00000300227 TTC39AQ5SRH9 613 aa16.78■□□□□ 0.28
CCDC178-201ENST00000300227 BECN1Q14457 450 aa16.78■□□□□ 0.28
CCDC178-201ENST00000300227 FAM227BQ96M60 508 aa16.78■□□□□ 0.28
CCDC178-201ENST00000300227 CDC5LQ99459 802 aaKnown RBP16.78■□□□□ 0.28
CCDC178-201ENST00000300227 SGSM2O43147 1006 aa16.78■□□□□ 0.28
CCDC178-201ENST00000300227 FKBP4Q02790 459 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCDC178-201ENST00000300227 KIF2CQ99661 725 aa16.78■□□□□ 0.28
CCDC178-201ENST00000300227 HAUS7Q99871 368 aa16.78■□□□□ 0.28
CCDC178-201ENST00000300227 TAF1LQ8IZX4 1826 aa16.77■□□□□ 0.28
CCDC178-201ENST00000300227 VGLL2Q8N8G2 317 aa16.77■□□□□ 0.28
CCDC178-201ENST00000300227 CNBD1Q8NA66 436 aa16.77■□□□□ 0.28
CCDC178-201ENST00000300227 BCORQ6W2J9 1755 aa16.77■□□□□ 0.27
CCDC178-201ENST00000300227 CHGBP05060 677 aa16.77■□□□□ 0.27
CCDC178-201ENST00000300227 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.27
CCDC178-201ENST00000300227 SLC10A5Q5PT55 438 aa16.77■□□□□ 0.27
CCDC178-201ENST00000300227 ANKRD18AQ8IVF6 992 aa16.77■□□□□ 0.27
CCDC178-201ENST00000300227 TBC1D2Q9BYX2 928 aa16.77■□□□□ 0.27
CCDC178-201ENST00000300227 NMIQ13287 307 aaPredicted RBP16.76■□□□□ 0.27
CCDC178-201ENST00000300227 MROH5Q6ZUA9 1318 aa16.76■□□□□ 0.27
CCDC178-201ENST00000300227 KIAA1211Q6ZU35 1233 aa16.76■□□□□ 0.27
CCDC178-201ENST00000300227 RUFY2Q8WXA3 655 aa16.76■□□□□ 0.27
CCDC178-201ENST00000300227 CELF1Q92879 486 aaKnown RBP16.76■□□□□ 0.27
CCDC178-201ENST00000300227 CARMIL3Q8ND23 1372 aa16.76■□□□□ 0.27
CCDC178-201ENST00000300227 PAG1Q9NWQ8 432 aa16.76■□□□□ 0.27
CCDC178-201ENST00000300227 SCN7AQ01118 1682 aa16.75■□□□□ 0.27
CCDC178-201ENST00000300227 SCARF1Q14162 830 aa16.75■□□□□ 0.27
CCDC178-201ENST00000300227 PUM3Q15397 648 aaKnown RBP16.75■□□□□ 0.27
CCDC178-201ENST00000300227 PI16Q6UXB8 463 aa16.75■□□□□ 0.27
CCDC178-201ENST00000300227 SPRYD3Q8NCJ5 442 aa16.75■□□□□ 0.27
CCDC178-201ENST00000300227 ANTXR1Q9H6X2 564 aa16.75■□□□□ 0.27
CCDC178-201ENST00000300227 A0A0D9SFI3 127 aa16.74■□□□□ 0.27
CCDC178-201ENST00000300227 EN1Q05925 392 aaPredicted RBP16.74■□□□□ 0.27
CCDC178-201ENST00000300227 CHRNDQ07001 517 aa16.74■□□□□ 0.27
CCDC178-201ENST00000300227 RTL9Q8NET4 1388 aa16.74■□□□□ 0.27
CCDC178-201ENST00000300227 HIP1O00291 1037 aa16.73■□□□□ 0.27
CCDC178-201ENST00000300227 SERPINB2P05120 415 aa16.73■□□□□ 0.27
CCDC178-201ENST00000300227 SLFNL1Q499Z3 407 aa16.73■□□□□ 0.27
CCDC178-201ENST00000300227 COL23A1Q86Y22 540 aaPredicted RBP16.73■□□□□ 0.27
CCDC178-201ENST00000300227 LPIN2Q92539 896 aa16.73■□□□□ 0.27
CCDC178-201ENST00000300227 PHKA1P46020 1223 aa16.73■□□□□ 0.27
CCDC178-201ENST00000300227 PRR5LQ6MZQ0 368 aa16.73■□□□□ 0.27
CCDC178-201ENST00000300227 PALD1Q9ULE6 856 aa16.73■□□□□ 0.27
CCDC178-201ENST00000300227 MYH3P11055 1940 aa16.73■□□□□ 0.27
CCDC178-201ENST00000300227 MCCP23508 829 aa16.73■□□□□ 0.27
CCDC178-201ENST00000300227 EZH2Q15910 746 aaKnown RBP16.73■□□□□ 0.27
CCDC178-201ENST00000300227 KBTBD3Q8NAB2 608 aa16.73■□□□□ 0.27
CCDC178-201ENST00000300227 AKT1S1Q96B36 256 aa16.73■□□□□ 0.27
CCDC178-201ENST00000300227 TUBGCP6Q96RT7 1819 aa16.73■□□□□ 0.27
CCDC178-201ENST00000300227 WTIPA6NIX2 430 aaPredicted RBP16.72■□□□□ 0.27
CCDC178-201ENST00000300227 SLC5A1P13866 664 aa16.72■□□□□ 0.27
CCDC178-201ENST00000300227 RPS8P62241 208 aaKnown RBP16.72■□□□□ 0.27
CCDC178-201ENST00000300227 HSCBQ8IWL3 235 aa16.72■□□□□ 0.27
CCDC178-201ENST00000300227 ZAP70P43403 619 aa16.72■□□□□ 0.27
CCDC178-201ENST00000300227 CCDC102BQ68D86 513 aa16.72■□□□□ 0.27
CCDC178-201ENST00000300227 DDX60Q8IY21 1712 aaKnown RBP16.71■□□□□ 0.27
CCDC178-201ENST00000300227 PTH1RQ03431 593 aa16.71■□□□□ 0.27
CCDC178-201ENST00000300227 DDR1Q08345 913 aa16.71■□□□□ 0.27
CCDC178-201ENST00000300227 SEC62Q99442 399 aaKnown RBP16.71■□□□□ 0.27
CCDC178-201ENST00000300227 LSG1Q9H089 658 aaKnown RBP16.71■□□□□ 0.27
CCDC178-201ENST00000300227 FGFR2P21802 821 aa16.71■□□□□ 0.27
CCDC178-201ENST00000300227 HMGB2P26583 209 aaKnown RBP16.71■□□□□ 0.27
CCDC178-201ENST00000300227 CD2BP2O95400 341 aaKnown RBP16.71■□□□□ 0.26
CCDC178-201ENST00000300227 TM4SF1P30408 202 aa16.71■□□□□ 0.26
CCDC178-201ENST00000300227 MCAMP43121 646 aa16.71■□□□□ 0.26
CCDC178-201ENST00000300227 MSL1Q68DK7 614 aa16.71■□□□□ 0.26
CCDC178-201ENST00000300227 BSDC1Q9NW68 430 aaPredicted RBP16.71■□□□□ 0.26
CCDC178-201ENST00000300227 C4AP0C0L4 1744 aa16.7■□□□□ 0.26
CCDC178-201ENST00000300227 KCNJ4P48050 445 aa16.7■□□□□ 0.26
CCDC178-201ENST00000300227 ZNF589Q86UQ0 364 aaPredicted RBP16.7■□□□□ 0.26
CCDC178-201ENST00000300227 SLKQ9H2G2 1235 aaPredicted RBP16.7■□□□□ 0.26
CCDC178-201ENST00000300227 MINPP1Q9UNW1 487 aa16.7■□□□□ 0.26
CCDC178-201ENST00000300227 COL4A1P02462 1669 aa16.7■□□□□ 0.26
CCDC178-201ENST00000300227 RAD50Q92878 1312 aa16.7■□□□□ 0.26
CCDC178-201ENST00000300227 ST5P78524 1137 aa16.7■□□□□ 0.26
CCDC178-201ENST00000300227 CCDC129Q6ZRS4 1044 aa16.7■□□□□ 0.26
CCDC178-201ENST00000300227 BCAMP50895 628 aa16.69■□□□□ 0.26
CCDC178-201ENST00000300227 RABEP1Q15276 862 aa16.69■□□□□ 0.26
CCDC178-201ENST00000300227 IQSEC3Q9UPP2 1182 aaPredicted RBP16.69■□□□□ 0.26
CCDC178-201ENST00000300227 UBR3Q6ZT12 1888 aa16.69■□□□□ 0.26
CCDC178-201ENST00000300227 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
CCDC178-201ENST00000300227 POLRMTO00411 1230 aaKnown RBP16.68■□□□□ 0.26
CCDC178-201ENST00000300227 DEFB132Q7Z7B7 95 aa16.68■□□□□ 0.26
CCDC178-201ENST00000300227 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC178-201ENST00000300227 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
CCDC178-201ENST00000300227 RPGRQ92834 1020 aaKnown RBP16.68■□□□□ 0.26
CCDC178-201ENST00000300227 AK9Q5TCS8 1911 aa16.68■□□□□ 0.26
CCDC178-201ENST00000300227 CCDC171Q6TFL3 1326 aa16.67■□□□□ 0.26
CCDC178-201ENST00000300227 SF3B2Q13435 895 aaKnown RBP16.67■□□□□ 0.26
CCDC178-201ENST00000300227 NLGN1Q8N2Q7 840 aa16.67■□□□□ 0.26
CCDC178-201ENST00000300227 HSPA4P34932 840 aa16.67■□□□□ 0.26
CCDC178-201ENST00000300227 PRPF40BQ6NWY9 871 aaKnown RBP16.67■□□□□ 0.26
CCDC178-201ENST00000300227 UPF3BQ9BZI7 483 aaKnown RBP16.67■□□□□ 0.26
CCDC178-201ENST00000300227 PNPLA7Q6ZV29 1317 aa16.67■□□□□ 0.26
CCDC178-201ENST00000300227 NEK4P51957 841 aa16.66■□□□□ 0.26
CCDC178-201ENST00000300227 LRP5O75197 1615 aa16.66■□□□□ 0.26
CCDC178-201ENST00000300227 IDH1O75874 414 aaKnown RBP16.66■□□□□ 0.26
CCDC178-201ENST00000300227 UQCRFS1P1P0C7P4 283 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms