RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 NRKQ7Z2Y5 1582 aa15.18■□□□□ 0.02
TVP23A-201ENST00000299866 ADGRL3Q9HAR2 1447 aa15.18■□□□□ 0.02
TVP23A-201ENST00000299866 ZRANB2O95218 330 aaKnown RBP eCLIP15.18■□□□□ 0.02
TVP23A-201ENST00000299866 SCRN1Q12765 414 aa15.18■□□□□ 0.02
TVP23A-201ENST00000299866 GNL2Q13823 731 aaKnown RBP15.18■□□□□ 0.02
TVP23A-201ENST00000299866 IMPACTQ9P2X3 320 aa15.18■□□□□ 0.02
TVP23A-201ENST00000299866 PSDA5PKW4 1024 aaPredicted RBP15.18■□□□□ 0.02
TVP23A-201ENST00000299866 OAS2P29728 719 aaKnown RBP15.18■□□□□ 0.02
TVP23A-201ENST00000299866 GYS2P54840 703 aa15.18■□□□□ 0.02
TVP23A-201ENST00000299866 ETF1P62495 437 aaKnown RBP15.18■□□□□ 0.02
TVP23A-201ENST00000299866 CCT2P78371 535 aaKnown RBP15.18■□□□□ 0.02
TVP23A-201ENST00000299866 NUTM2GQ5VZR2 741 aa15.18■□□□□ 0.02
TVP23A-201ENST00000299866 KCND1Q9NSA2 647 aa15.18■□□□□ 0.02
TVP23A-201ENST00000299866 G3BP1Q13283 466 aaKnown RBP eCLIP15.17■□□□□ 0.02
TVP23A-201ENST00000299866 ENGASEQ8NFI3 743 aa15.17■□□□□ 0.02
TVP23A-201ENST00000299866 NPHP4O75161 1426 aaPredicted RBP15.17■□□□□ 0.02
TVP23A-201ENST00000299866 PTPN21Q16825 1174 aa15.17■□□□□ 0.02
TVP23A-201ENST00000299866 ERC1Q8IUD2 1116 aa15.17■□□□□ 0.02
TVP23A-201ENST00000299866 SEC62Q99442 399 aaKnown RBP15.17■□□□□ 0.02
TVP23A-201ENST00000299866 TSPYL1Q9H0U9 437 aa15.17■□□□□ 0.02
TVP23A-201ENST00000299866 NDUFB9Q9Y6M9 179 aa15.17■□□□□ 0.02
TVP23A-201ENST00000299866 LMOD1P29536 600 aaPredicted RBP15.16■□□□□ 0.02
TVP23A-201ENST00000299866 CCDC129Q6ZRS4 1044 aa15.16■□□□□ 0.02
TVP23A-201ENST00000299866 TXLNBQ8N3L3 684 aa15.16■□□□□ 0.02
TVP23A-201ENST00000299866 USHBP1Q8N6Y0 703 aa15.16■□□□□ 0.02
TVP23A-201ENST00000299866 SASH1O94885 1247 aa15.16■□□□□ 0.02
TVP23A-201ENST00000299866 CHGBP05060 677 aa15.16■□□□□ 0.02
TVP23A-201ENST00000299866 EVCP57679 992 aa15.16■□□□□ 0.02
TVP23A-201ENST00000299866 GOLGA8FQ08AF8 430 aa15.16■□□□□ 0.02
TVP23A-201ENST00000299866 GOLGA8DPQ0D2H9 430 aa15.16■□□□□ 0.02
TVP23A-201ENST00000299866 CWF19L2Q2TBE0 894 aaKnown RBP15.16■□□□□ 0.02
TVP23A-201ENST00000299866 C10orf67Q8IYJ2 551 aa15.16■□□□□ 0.02
TVP23A-201ENST00000299866 KCNQ3O43525 872 aa15.16■□□□□ 0.02
TVP23A-201ENST00000299866 OVOS2A0A0J9YW53 1432 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 OVOS2Q6IE36 1432 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 TAF5LO75529 589 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 SASH3O75995 380 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 ZNF396Q96N95 335 aaPredicted RBP15.15■□□□□ 0.02
TVP23A-201ENST00000299866 ALDH8A1Q9H2A2 487 aaPredicted RBP15.15■□□□□ 0.02
TVP23A-201ENST00000299866 HMG20BQ9P0W2 317 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 PXDNLA1KZ92 1463 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 IGSF1Q8N6C5 1336 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 PEAK1Q9H792 1746 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 MLECQ14165 292 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 CCDC191Q8NCU4 936 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 KLHDC4Q8TBB5 520 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 CEP170BQ9Y4F5 1589 aaPredicted RBP15.15■□□□□ 0.02
TVP23A-201ENST00000299866 PTPDC1A2A3K4 754 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 TRIM66O15016 1216 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 SF3A1Q15459 793 aaKnown RBP15.15■□□□□ 0.02
TVP23A-201ENST00000299866 UTP14AQ9BVJ6 771 aaKnown RBP15.15■□□□□ 0.02
TVP23A-201ENST00000299866 NCOA5Q9HCD5 579 aaKnown RBP15.15■□□□□ 0.02
TVP23A-201ENST00000299866 RSPH14Q9UHP6 348 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 MAP3K2Q9Y2U5 619 aa15.15■□□□□ 0.02
TVP23A-201ENST00000299866 TADA3O75528 432 aa15.14■□□□□ 0.01
TVP23A-201ENST00000299866 GPS2Q13227 327 aa15.14■□□□□ 0.01
TVP23A-201ENST00000299866 SMC1AQ14683 1233 aaKnown RBP15.14■□□□□ 0.01
TVP23A-201ENST00000299866 ZSCAN26Q16670 478 aa15.14■□□□□ 0.01
TVP23A-201ENST00000299866 PCDHA7Q9UN72 937 aa15.14■□□□□ 0.01
TVP23A-201ENST00000299866 FLT4P35916 1363 aa15.14■□□□□ 0.01
TVP23A-201ENST00000299866 NDUFA8P51970 172 aa15.14■□□□□ 0.01
TVP23A-201ENST00000299866 APOBRQ0VD83 1088 aa15.14■□□□□ 0.01
TVP23A-201ENST00000299866 KRT32Q14532 448 aa15.14■□□□□ 0.01
TVP23A-201ENST00000299866 NFATC2IPQ8NCF5 419 aa15.14■□□□□ 0.01
TVP23A-201ENST00000299866 MRPS27Q92552 414 aaKnown RBP15.14■□□□□ 0.01
TVP23A-201ENST00000299866 DIP2CQ9Y2E4 1556 aa15.14■□□□□ 0.01
TVP23A-201ENST00000299866 C3P01024 1663 aa15.13■□□□□ 0.01
TVP23A-201ENST00000299866 NSUN7Q8NE18 718 aaKnown RBP15.13■□□□□ 0.01
TVP23A-201ENST00000299866 LCMT1Q9UIC8 334 aa15.13■□□□□ 0.01
TVP23A-201ENST00000299866 CCDC9Q9Y3X0 531 aaKnown RBP15.13■□□□□ 0.01
TVP23A-201ENST00000299866 FANCGO15287 622 aa15.13■□□□□ 0.01
TVP23A-201ENST00000299866 TBC1D8O95759 1140 aa15.13■□□□□ 0.01
TVP23A-201ENST00000299866 KIAA1468Q9P260 1216 aa15.13■□□□□ 0.01
TVP23A-201ENST00000299866 KDRP35968 1356 aa15.13■□□□□ 0.01
TVP23A-201ENST00000299866 FAM208AQ9UK61 1670 aaKnown RBP15.13■□□□□ 0.01
TVP23A-201ENST00000299866 MON2Q7Z3U7 1717 aa15.13■□□□□ 0.01
TVP23A-201ENST00000299866 ATP1A3P13637 1013 aa15.13■□□□□ 0.01
TVP23A-201ENST00000299866 LMAN1P49257 510 aa15.13■□□□□ 0.01
TVP23A-201ENST00000299866 FMR1NBQ8N0W7 255 aaPredicted RBP15.13■□□□□ 0.01
TVP23A-201ENST00000299866 TAOK2Q9UL54 1235 aa15.13■□□□□ 0.01
TVP23A-201ENST00000299866 FANCCQ00597 558 aa15.12■□□□□ 0.01
TVP23A-201ENST00000299866 OTUD7BQ6GQQ9 843 aa15.12■□□□□ 0.01
TVP23A-201ENST00000299866 TRIM65Q6PJ69 517 aa15.12■□□□□ 0.01
TVP23A-201ENST00000299866 RASSF4Q9H2L5 321 aa15.12■□□□□ 0.01
TVP23A-201ENST00000299866 MTX1Q13505 466 aa15.12■□□□□ 0.01
TVP23A-201ENST00000299866 NAA16Q6N069 864 aaPredicted RBP15.12■□□□□ 0.01
TVP23A-201ENST00000299866 LGR6Q9HBX8 967 aa15.12■□□□□ 0.01
TVP23A-201ENST00000299866 SBNO1A3KN83 1393 aa15.12■□□□□ 0.01
TVP23A-201ENST00000299866 MED23Q9ULK4 1368 aa15.12■□□□□ 0.01
TVP23A-201ENST00000299866 PHLPP2Q6ZVD8 1323 aa15.12■□□□□ 0.01
TVP23A-201ENST00000299866 CTDNEP1O95476 244 aa15.11■□□□□ 0.01
TVP23A-201ENST00000299866 CYP21A2P08686 494 aa15.11■□□□□ 0.01
TVP23A-201ENST00000299866 EIF4A1P60842 406 aaKnown RBP15.11■□□□□ 0.01
TVP23A-201ENST00000299866 TEFQ10587 303 aa15.11■□□□□ 0.01
TVP23A-201ENST00000299866 SMARCC2Q8TAQ2 1214 aa15.11■□□□□ 0.01
TVP23A-201ENST00000299866 EFCAB8A8MWE9 144 aa15.11■□□□□ 0.01
TVP23A-201ENST00000299866 POLR3DP05423 398 aaPredicted RBP15.11■□□□□ 0.01
TVP23A-201ENST00000299866 STK38Q15208 465 aa15.11■□□□□ 0.01
TVP23A-201ENST00000299866 LRRFIP1Q32MZ4 808 aaKnown RBP15.11■□□□□ 0.01
TVP23A-201ENST00000299866 CC2D1AQ6P1N0 951 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms