RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PLB1Q6P1J6 1458 aa15.5■□□□□ 0.07
CHRFAM7A-201ENST00000299847 LRSAM1Q6UWE0 723 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 VTI1AQ96AJ9 217 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 WDR70Q9NW82 654 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 MICALCLQ6ZW33 695 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 APBB1IPQ7Z5R6 666 aaPredicted RBP15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 LRRC59Q96AG4 307 aaKnown RBP15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 PHACTR2O75167 634 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 NAPAP54920 295 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 KARSQ15046 597 aaKnown RBP15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 C8orf58Q8NAV2 365 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 TBC1D5Q92609 795 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 MAGI1Q96QZ7 1491 aaPredicted RBP15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 CCDC186Q7Z3E2 898 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 ZKSCAN3Q9BRR0 538 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 PCDHB15Q9Y5E8 787 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 ADGRL1O94910 1474 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 RIMBP2O15034 1052 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 ASIC1P78348 528 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 APOBRQ0VD83 1088 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 KIAA0753Q2KHM9 967 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 CABLES1Q8TDN4 633 aa15.49■□□□□ 0.07
CHRFAM7A-201ENST00000299847 KIF14Q15058 1648 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 SP4Q02446 784 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 SLC9C2Q5TAH2 1124 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 CEP112Q8N8E3 955 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 DACT1Q9NYF0 836 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 MCM6Q14566 821 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 OTUD6BQ8N6M0 293 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 MCM7P33993 719 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 LMBR1LQ6UX01 489 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 STXBP4Q6ZWJ1 553 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 NEMFO60524 1076 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 LDHCP07864 332 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 SKILP12757 684 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 ESYT1Q9BSJ8 1104 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 IKBKGQ9Y6K9 419 aa15.48■□□□□ 0.07
CHRFAM7A-201ENST00000299847 KRT24Q2M2I5 525 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 VEZTQ9HBM0 779 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 HMG20BQ9P0W2 317 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 WDHD1O75717 1129 aaPredicted RBP15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 KANK3Q6NY19 840 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 PKD2L1Q9P0L9 805 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 TOP2BQ02880 1626 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 DTNBO60941 627 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 EEF2P13639 858 aaKnown RBP15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 ATP2B3Q16720 1220 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 SPAG5Q96R06 1193 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 FAM170AA1A519 330 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 PDE1AP54750 535 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 MCMDC2Q4G0Z9 681 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 MAGEB6Q8N7X4 407 aa15.47■□□□□ 0.07
CHRFAM7A-201ENST00000299847 POTEB2H3BUK9 544 aa15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 GSTA5Q7RTV2 222 aa15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 KRT23Q9C075 422 aa15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 LMOD1P29536 600 aaPredicted RBP15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 MXRA7P84157 204 aa15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 PPARDQ03181 441 aa15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 NAA16Q6N069 864 aaPredicted RBP15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 MRPS9P82933 396 aaKnown RBP15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 CWF19L2Q2TBE0 894 aaKnown RBP15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 DNAJC21Q5F1R6 531 aaKnown RBP15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 TTC21BQ7Z4L5 1316 aa15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 TSNARE1Q96NA8 513 aa15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 TTC12Q9H892 705 aaPredicted RBP15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 NIP7Q9Y221 180 aaKnown RBP eCLIP15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 SYT1P21579 422 aa15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 CCDC50Q8IVM0 306 aa15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 SELENOSQ9BQE4 189 aa15.46■□□□□ 0.07
CHRFAM7A-201ENST00000299847 TTC21AQ8NDW8 1320 aa15.46■□□□□ 0.06
CHRFAM7A-201ENST00000299847 MAGEB6P1A0A0J9YX57 407 aa15.46■□□□□ 0.06
CHRFAM7A-201ENST00000299847 SETDB2Q96T68 719 aa15.46■□□□□ 0.06
CHRFAM7A-201ENST00000299847 ZSCAN16Q9H4T2 348 aaPredicted RBP15.46■□□□□ 0.06
CHRFAM7A-201ENST00000299847 RMND1Q9NWS8 449 aa15.46■□□□□ 0.06
CHRFAM7A-201ENST00000299847 GSTO1P78417 241 aa15.45■□□□□ 0.06
CHRFAM7A-201ENST00000299847 RTL1A6NKG5 1358 aa15.45■□□□□ 0.06
CHRFAM7A-201ENST00000299847 UQCRFS1P1P0C7P4 283 aa15.45■□□□□ 0.06
CHRFAM7A-201ENST00000299847 GIGYF2Q6Y7W6 1299 aaKnown RBP15.45■□□□□ 0.06
CHRFAM7A-201ENST00000299847 SMARCC2Q8TAQ2 1214 aa15.45■□□□□ 0.06
CHRFAM7A-201ENST00000299847 SAP30BPQ9UHR5 308 aaKnown RBP15.45■□□□□ 0.06
CHRFAM7A-201ENST00000299847 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.45■□□□□ 0.06
CHRFAM7A-201ENST00000299847 KLHL40Q2TBA0 621 aa15.45■□□□□ 0.06
CHRFAM7A-201ENST00000299847 UIMC1Q96RL1 719 aa15.45■□□□□ 0.06
CHRFAM7A-201ENST00000299847 PAG1Q9NWQ8 432 aa15.45■□□□□ 0.06
CHRFAM7A-201ENST00000299847 RSPH14Q9UHP6 348 aa15.45■□□□□ 0.06
CHRFAM7A-201ENST00000299847 ACTN2P35609 894 aa15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 GPIHBP1Q8IV16 184 aa15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 CCDC63Q8NA47 563 aa15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 MRPS27Q92552 414 aaKnown RBP15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 LZTFL1Q9NQ48 299 aa15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 CPA1P15085 419 aa15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 ESR2Q92731 530 aa15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 PRXQ9BXM0 1461 aa15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 FERP16591 822 aa15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 MRPL50Q8N5N7 158 aaKnown RBP15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 PODXL2Q9NZ53 605 aa15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 CALCOCO1Q9P1Z2 691 aa15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 CC2D2AQ9P2K1 1620 aa15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 TFCP2Q12800 502 aa15.44■□□□□ 0.06
CHRFAM7A-201ENST00000299847 ZCRB1Q8TBF4 217 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms