RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 EAF2Q96CJ1 260 aaPredicted RBP17.12■□□□□ 0.33
CDH23-202ENST00000299366 ZNF496Q96IT1 587 aaPredicted RBP17.12■□□□□ 0.33
CDH23-202ENST00000299366 FBXO3Q9UK99 471 aa17.12■□□□□ 0.33
CDH23-202ENST00000299366 ATP10AO60312 1499 aa17.12■□□□□ 0.33
CDH23-202ENST00000299366 NPHP3Q7Z494 1330 aa17.11■□□□□ 0.33
CDH23-202ENST00000299366 TTC21AQ8NDW8 1320 aa17.11■□□□□ 0.33
CDH23-202ENST00000299366 GTF2F1P35269 517 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDH23-202ENST00000299366 UBASH3AP57075 661 aa17.11■□□□□ 0.33
CDH23-202ENST00000299366 SSRP1Q08945 709 aaKnown RBP17.11■□□□□ 0.33
CDH23-202ENST00000299366 ME3Q16798 604 aa17.11■□□□□ 0.33
CDH23-202ENST00000299366 CCDC94Q9BW85 323 aaPredicted RBP17.11■□□□□ 0.33
CDH23-202ENST00000299366 STX8Q9UNK0 236 aa17.11■□□□□ 0.33
CDH23-202ENST00000299366 CCDC24Q8N4L8 307 aa17.11■□□□□ 0.33
CDH23-202ENST00000299366 INTS4Q96HW7 963 aaKnown RBP17.11■□□□□ 0.33
CDH23-202ENST00000299366 IFNKQ9P0W0 207 aa17.11■□□□□ 0.33
CDH23-202ENST00000299366 ZMYM3Q14202 1370 aa17.11■□□□□ 0.33
CDH23-202ENST00000299366 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
CDH23-202ENST00000299366 SOGA3Q5TF21 947 aa17.11■□□□□ 0.33
CDH23-202ENST00000299366 HMG20BQ9P0W2 317 aa17.11■□□□□ 0.33
CDH23-202ENST00000299366 hCG_1642624A0A1W2PR95 340 aa17.1■□□□□ 0.33
CDH23-202ENST00000299366 ZNF500O60304 480 aaPredicted RBP17.1■□□□□ 0.33
CDH23-202ENST00000299366 IDEP14735 1019 aa17.1■□□□□ 0.33
CDH23-202ENST00000299366 U2AF2P26368 475 aaKnown RBP eCLIP17.1■□□□□ 0.33
CDH23-202ENST00000299366 NLRP5P59047 1200 aa17.1■□□□□ 0.33
CDH23-202ENST00000299366 LRMPQ12912 555 aa17.1■□□□□ 0.33
CDH23-202ENST00000299366 CT47A1Q5JQC4 288 aaPredicted RBP17.1■□□□□ 0.33
CDH23-202ENST00000299366 MRPS27Q92552 414 aaKnown RBP17.1■□□□□ 0.33
CDH23-202ENST00000299366 PUS7Q96PZ0 661 aaKnown RBP17.1■□□□□ 0.33
CDH23-202ENST00000299366 A0A0D9SFI3 127 aa17.1■□□□□ 0.33
CDH23-202ENST00000299366 KIAA1328Q86T90 577 aa17.1■□□□□ 0.33
CDH23-202ENST00000299366 PLIN2Q99541 437 aa17.1■□□□□ 0.33
CDH23-202ENST00000299366 PPP1R1BQ9UD71 204 aaPredicted RBP17.1■□□□□ 0.33
CDH23-202ENST00000299366 ZNF790Q6PG37 636 aa17.1■□□□□ 0.33
CDH23-202ENST00000299366 CTCFLQ8NI51 663 aaPredicted RBP17.1■□□□□ 0.33
CDH23-202ENST00000299366 ANKIB1Q9P2G1 1089 aa17.1■□□□□ 0.33
CDH23-202ENST00000299366 ZBTB43O43298 467 aa17.09■□□□□ 0.33
CDH23-202ENST00000299366 CCDC102BQ68D86 513 aa17.09■□□□□ 0.33
CDH23-202ENST00000299366 MFSD6Q6ZSS7 791 aa17.09■□□□□ 0.33
CDH23-202ENST00000299366 NUP88Q99567 741 aaPredicted RBP17.09■□□□□ 0.33
CDH23-202ENST00000299366 PHF23Q9BUL5 403 aaPredicted RBP17.09■□□□□ 0.33
CDH23-202ENST00000299366 DDX21Q9NR30 783 aaKnown RBP eCLIP17.09■□□□□ 0.33
CDH23-202ENST00000299366 MAST1Q9Y2H9 1570 aa17.09■□□□□ 0.33
CDH23-202ENST00000299366 H0YHG0 523 aa17.09■□□□□ 0.33
CDH23-202ENST00000299366 MATR3P43243 847 aaKnown RBP eCLIP17.09■□□□□ 0.33
CDH23-202ENST00000299366 CTDP1Q9Y5B0 961 aaPredicted RBP17.09■□□□□ 0.33
CDH23-202ENST00000299366 RAD50Q92878 1312 aa17.09■□□□□ 0.33
CDH23-202ENST00000299366 UVSSAQ2YD98 709 aa17.09■□□□□ 0.33
CDH23-202ENST00000299366 BRD1O95696 1058 aa17.08■□□□□ 0.33
CDH23-202ENST00000299366 IQCA1Q86XH1 822 aa17.08■□□□□ 0.33
CDH23-202ENST00000299366 ZCRB1Q8TBF4 217 aaKnown RBP17.08■□□□□ 0.33
CDH23-202ENST00000299366 DACH1Q9UI36 760 aa17.08■□□□□ 0.33
CDH23-202ENST00000299366 WWC3Q9ULE0 1092 aa17.08■□□□□ 0.33
CDH23-202ENST00000299366 SPTLC2O15270 562 aa17.08■□□□□ 0.32
CDH23-202ENST00000299366 PRDM1O75626 825 aa17.08■□□□□ 0.32
CDH23-202ENST00000299366 TLR7Q9NYK1 1049 aaKnown RBP17.08■□□□□ 0.32
CDH23-202ENST00000299366 A0A1B0GUL7 405 aa17.08■□□□□ 0.32
CDH23-202ENST00000299366 MPHOSPH10O00566 681 aaKnown RBP17.08■□□□□ 0.32
CDH23-202ENST00000299366 KARSQ15046 597 aaKnown RBP17.08■□□□□ 0.32
CDH23-202ENST00000299366 PTPN21Q16825 1174 aa17.08■□□□□ 0.32
CDH23-202ENST00000299366 CCDC181Q5TID7 509 aa17.08■□□□□ 0.32
CDH23-202ENST00000299366 ZSCAN16Q9H4T2 348 aaPredicted RBP17.08■□□□□ 0.32
CDH23-202ENST00000299366 SEPT11Q9NVA2 429 aaKnown RBP17.08■□□□□ 0.32
CDH23-202ENST00000299366 SAMD9LQ8IVG5 1584 aa17.08■□□□□ 0.32
CDH23-202ENST00000299366 TTC41PQ6P2S7 1318 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDH23-202ENST00000299366 CTAGE5O15320 804 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 STIM1Q13586 685 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 DHX32Q7L7V1 743 aaKnown RBP17.07■□□□□ 0.32
CDH23-202ENST00000299366 TSPYL1Q9H0U9 437 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 CCP110O43303 1012 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 DZIP1Q86YF9 867 aaKnown RBP17.07■□□□□ 0.32
CDH23-202ENST00000299366 IP6K1Q92551 441 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 CCDC66A2RUB6 948 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 B4E1Z4 1266 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 SYNMO15061 1565 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 HSPA4P34932 840 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 CAVIN4Q5BKX8 364 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 CCDC12Q8WUD4 166 aaPredicted RBP17.07■□□□□ 0.32
CDH23-202ENST00000299366 PHKBQ93100 1093 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 AK7Q96M32 723 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 DRC1Q96MC2 740 aa17.07■□□□□ 0.32
CDH23-202ENST00000299366 TSPY2A6NKD2 308 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 SLC5A1P13866 664 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 EIF4A1P60842 406 aaKnown RBP17.06■□□□□ 0.32
CDH23-202ENST00000299366 SYT10Q6XYQ8 523 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 DHX58Q96C10 678 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 UBA5Q9GZZ9 404 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 ERCC3P19447 782 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 PRIMPOLQ96LW4 560 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 ZDHHC9Q9Y397 364 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 POGZQ7Z3K3 1410 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 PPARDQ03181 441 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 LEKR1Q6ZMV7 388 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 STAMQ92783 540 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 ACBD3Q9H3P7 528 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 MAPK8IP1Q9UQF2 711 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 SLC4A4Q9Y6R1 1079 aa17.06■□□□□ 0.32
CDH23-202ENST00000299366 EXOC5O00471 708 aa17.05■□□□□ 0.32
CDH23-202ENST00000299366 RIOK3O14730 519 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms