RNA–Protein interactions for RNA: ENST00000299300.10

CCT2-201, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT2, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-201ENST00000299300 CHGBP05060 677 aa16.53■□□□□ 0.24
CCT2-201ENST00000299300 Q6ZUG5 572 aa16.53■□□□□ 0.24
CCT2-201ENST00000299300 DNAJC2Q99543 621 aaKnown RBP16.53■□□□□ 0.24
CCT2-201ENST00000299300 DDX19AQ9NUU7 478 aaKnown RBP16.53■□□□□ 0.24
CCT2-201ENST00000299300 NDUFB9Q9Y6M9 179 aa16.53■□□□□ 0.24
CCT2-201ENST00000299300 TNS2Q63HR2 1409 aa16.53■□□□□ 0.24
CCT2-201ENST00000299300 ERVV-2B6SEH9 535 aa16.53■□□□□ 0.24
CCT2-201ENST00000299300 JAK2O60674 1132 aa16.53■□□□□ 0.24
CCT2-201ENST00000299300 HMGB1P09429 215 aaKnown RBP16.53■□□□□ 0.24
CCT2-201ENST00000299300 IL15P40933 162 aaPredicted RBP16.53■□□□□ 0.24
CCT2-201ENST00000299300 NKX1-1Q15270 411 aaPredicted RBP16.53■□□□□ 0.24
CCT2-201ENST00000299300 ZMYM1Q5SVZ6 1142 aa16.53■□□□□ 0.24
CCT2-201ENST00000299300 DDX46Q7L014 1031 aaKnown RBP16.53■□□□□ 0.24
CCT2-201ENST00000299300 FAM200AQ8TCP9 573 aa16.53■□□□□ 0.24
CCT2-201ENST00000299300 ATG3Q9NT62 314 aa16.53■□□□□ 0.24
CCT2-201ENST00000299300 CWC25Q9NXE8 425 aaPredicted RBP16.53■□□□□ 0.24
CCT2-201ENST00000299300 MRVI1Q9Y6F6 885 aa16.53■□□□□ 0.24
CCT2-201ENST00000299300 CIAO1O76071 339 aa16.52■□□□□ 0.24
CCT2-201ENST00000299300 EXOSC10Q01780 885 aaKnown RBP16.52■□□□□ 0.24
CCT2-201ENST00000299300 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCT2-201ENST00000299300 SPATA32Q96LK8 384 aa16.52■□□□□ 0.24
CCT2-201ENST00000299300 CLSTN2Q9H4D0 955 aa16.52■□□□□ 0.24
CCT2-201ENST00000299300 XIRP1Q702N8 1843 aaKnown RBP16.52■□□□□ 0.23
CCT2-201ENST00000299300 TPM3P06753 285 aa16.52■□□□□ 0.23
CCT2-201ENST00000299300 TYRO3Q06418 890 aa16.52■□□□□ 0.23
CCT2-201ENST00000299300 STK3Q13188 491 aa16.52■□□□□ 0.23
CCT2-201ENST00000299300 TTLL7Q6ZT98 887 aa16.52■□□□□ 0.23
CCT2-201ENST00000299300 CADPS2Q86UW7 1296 aa16.52■□□□□ 0.23
CCT2-201ENST00000299300 CCDC191Q8NCU4 936 aa16.52■□□□□ 0.23
CCT2-201ENST00000299300 BRF1Q92994 677 aa16.52■□□□□ 0.23
CCT2-201ENST00000299300 PGBD1Q96JS3 809 aa16.52■□□□□ 0.23
CCT2-201ENST00000299300 ZSCAN16Q9H4T2 348 aaPredicted RBP16.52■□□□□ 0.23
CCT2-201ENST00000299300 PAG1Q9NWQ8 432 aa16.52■□□□□ 0.23
CCT2-201ENST00000299300 PCDH11XQ9BZA7 1347 aa16.51■□□□□ 0.23
CCT2-201ENST00000299300 PCDH11YQ9BZA8 1340 aa16.51■□□□□ 0.23
CCT2-201ENST00000299300 DYNC1I1O14576 645 aa16.51■□□□□ 0.23
CCT2-201ENST00000299300 DHX32Q7L7V1 743 aaKnown RBP16.51■□□□□ 0.23
CCT2-201ENST00000299300 PDCL3Q9H2J4 239 aa16.51■□□□□ 0.23
CCT2-201ENST00000299300 UQCRHLA0A096LP55 91 aa16.5■□□□□ 0.23
CCT2-201ENST00000299300 EYA2O00167 538 aa16.5■□□□□ 0.23
CCT2-201ENST00000299300 UQCRHP07919 91 aa16.5■□□□□ 0.23
CCT2-201ENST00000299300 PRKCSHP14314 528 aaPredicted RBP16.5■□□□□ 0.23
CCT2-201ENST00000299300 SCRN1Q12765 414 aa16.5■□□□□ 0.23
CCT2-201ENST00000299300 NOLC1Q14978 699 aaKnown RBP eCLIP16.5■□□□□ 0.234e-16■■■□□ 17.3
CCT2-201ENST00000299300 TPRNQ4KMQ1 711 aa16.5■□□□□ 0.23
CCT2-201ENST00000299300 NAA16Q6N069 864 aaPredicted RBP16.5■□□□□ 0.23
CCT2-201ENST00000299300 TTC12Q9H892 705 aaPredicted RBP16.5■□□□□ 0.23
CCT2-201ENST00000299300 DACT1Q9NYF0 836 aa16.5■□□□□ 0.23
CCT2-201ENST00000299300 TFIP11Q9UBB9 837 aaKnown RBP16.5■□□□□ 0.23
CCT2-201ENST00000299300 WDR17Q8IZU2 1322 aa16.5■□□□□ 0.23
CCT2-201ENST00000299300 ADD1P35611 737 aaKnown RBP16.5■□□□□ 0.23
CCT2-201ENST00000299300 FBXL16Q8N461 479 aa16.5■□□□□ 0.23
CCT2-201ENST00000299300 ZNF830Q96NB3 372 aaPredicted RBP16.5■□□□□ 0.23
CCT2-201ENST00000299300 NSUN7Q8NE18 718 aaKnown RBP16.49■□□□□ 0.23
CCT2-201ENST00000299300 ZCRB1Q8TBF4 217 aaKnown RBP16.49■□□□□ 0.23
CCT2-201ENST00000299300 DDX60Q8IY21 1712 aaKnown RBP16.49■□□□□ 0.23
CCT2-201ENST00000299300 SALL1Q9NSC2 1324 aa16.49■□□□□ 0.23
CCT2-201ENST00000299300 CTDNEP1O95476 244 aa16.48■□□□□ 0.23
CCT2-201ENST00000299300 TNMDQ9H2S6 317 aa16.48■□□□□ 0.23
CCT2-201ENST00000299300 NWD2Q9ULI1 1742 aa16.48■□□□□ 0.23
CCT2-201ENST00000299300 GOLIM4O00461 696 aa16.48■□□□□ 0.23
CCT2-201ENST00000299300 RNF113AO15541 343 aaKnown RBP16.48■□□□□ 0.23
CCT2-201ENST00000299300 ISCA1Q9BUE6 129 aa16.48■□□□□ 0.23
CCT2-201ENST00000299300 KCNF1Q9H3M0 494 aa16.48■□□□□ 0.23
CCT2-201ENST00000299300 A1BGP04217 495 aa16.47■□□□□ 0.23
CCT2-201ENST00000299300 TIMM10P62072 90 aa16.47■□□□□ 0.23
CCT2-201ENST00000299300 HMGN5P82970 282 aaKnown RBP16.47■□□□□ 0.23
CCT2-201ENST00000299300 LRRC24Q50LG9 513 aa16.47■□□□□ 0.23
CCT2-201ENST00000299300 TDRD7Q8NHU6 1098 aaKnown RBP16.47■□□□□ 0.23
CCT2-201ENST00000299300 KIAA1524Q8TCG1 905 aa16.47■□□□□ 0.23
CCT2-201ENST00000299300 PRIMPOLQ96LW4 560 aa16.47■□□□□ 0.23
CCT2-201ENST00000299300 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
CCT2-201ENST00000299300 RCOR1Q9UKL0 485 aa16.47■□□□□ 0.23
CCT2-201ENST00000299300 ABCA3Q99758 1704 aa16.47■□□□□ 0.23
CCT2-201ENST00000299300 COL5A2P05997 1499 aaPredicted RBP16.47■□□□□ 0.23
CCT2-201ENST00000299300 MAST3O60307 1309 aa16.47■□□□□ 0.23
CCT2-201ENST00000299300 TOGARAM1Q9Y4F4 1720 aa16.47■□□□□ 0.23
CCT2-201ENST00000299300 GOLGA6L4A6NEF3 574 aa16.46■□□□□ 0.23
CCT2-201ENST00000299300 HSPD1P10809 573 aaKnown RBP16.46■□□□□ 0.23
CCT2-201ENST00000299300 EVCP57679 992 aa16.46■□□□□ 0.23
CCT2-201ENST00000299300 ATL3Q6DD88 541 aa16.46■□□□□ 0.23
CCT2-201ENST00000299300 MYRIPQ8NFW9 859 aa16.46■□□□□ 0.23
CCT2-201ENST00000299300 ZNF274Q96GC6 653 aaPredicted RBP16.46■□□□□ 0.23
CCT2-201ENST00000299300 MAP7D2Q96T17 732 aa16.46■□□□□ 0.23
CCT2-201ENST00000299300 CBX8Q9HC52 389 aa16.46■□□□□ 0.23
CCT2-201ENST00000299300 CFAP45Q9UL16 551 aa16.46■□□□□ 0.23
CCT2-201ENST00000299300 E7EWF7 191 aa16.46■□□□□ 0.23
CCT2-201ENST00000299300 HSP90B1P14625 803 aaKnown RBP16.46■□□□□ 0.23
CCT2-201ENST00000299300 CAMK4Q16566 473 aa16.46■□□□□ 0.23
CCT2-201ENST00000299300 MPNDQ8N594 471 aa16.46■□□□□ 0.23
CCT2-201ENST00000299300 NEUROD6Q96NK8 337 aa16.46■□□□□ 0.23
CCT2-201ENST00000299300 MYH7P12883 1935 aa16.46■□□□□ 0.22
CCT2-201ENST00000299300 A0A1B0GUL7 405 aa16.45■□□□□ 0.22
CCT2-201ENST00000299300 NR1I2O75469 434 aa16.45■□□□□ 0.22
CCT2-201ENST00000299300 TRIM28Q13263 835 aaKnown RBP16.45■□□□□ 0.22
CCT2-201ENST00000299300 SLFNL1Q499Z3 407 aa16.45■□□□□ 0.22
CCT2-201ENST00000299300 CHMP3Q9Y3E7 222 aa16.45■□□□□ 0.22
CCT2-201ENST00000299300 H3BQV1 296 aa16.45■□□□□ 0.22
CCT2-201ENST00000299300 CAVIN2O95810 425 aa16.45■□□□□ 0.22
CCT2-201ENST00000299300 IFIT1P09914 478 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms