RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 WDR78Q5VTH9 848 aa6.33□□□□□ -1.4
CPSF2-201ENST00000298875 PTGS1P23219 599 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 AFMP43652 599 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 CCDC184Q52MB2 194 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 GIMAP6Q6P9H5 292 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 ZNF365Q70YC5 407 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 KAT14Q9H8E8 782 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 NOL3O60936 208 aaKnown RBP6.32□□□□□ -1.4
CPSF2-201ENST00000298875 PTCD1O75127 700 aaKnown RBP6.32□□□□□ -1.4
CPSF2-201ENST00000298875 IDEP14735 1019 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 HSP90AA4PQ58FG1 418 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 PYM1Q9BRP8 204 aaKnown RBP6.32□□□□□ -1.4
CPSF2-201ENST00000298875 RMND1Q9NWS8 449 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 UBASH3AP57075 661 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 TSNAXIP1Q2TAA8 658 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 KIF5BP33176 963 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 CEP57Q86XR8 500 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 USHBP1Q8N6Y0 703 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 EVI5LQ96CN4 794 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.32□□□□□ -1.42e-6■■□□□ 12.5
CPSF2-201ENST00000298875 CCDC172P0C7W6 258 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 GJC1P36383 396 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 ZNF165P49910 485 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 SSH1Q8WYL5 1049 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 CTAGE1Q96RT6 745 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 CDK13Q14004 1512 aaKnown RBP6.32□□□□□ -1.4
CPSF2-201ENST00000298875 MAP7Q14244 749 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 RRAGBQ5VZM2 374 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 CCDC129Q6ZRS4 1044 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 AOPEPQ8N6M6 819 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 RPGRQ92834 1020 aaKnown RBP6.32□□□□□ -1.4
CPSF2-201ENST00000298875 SLC26A6Q9BXS9 759 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 RARSP54136 660 aaKnown RBP6.32□□□□□ -1.4
CPSF2-201ENST00000298875 TBCAO75347 108 aaKnown RBP6.32□□□□□ -1.4
CPSF2-201ENST00000298875 IARSP41252 1262 aaKnown RBP6.32□□□□□ -1.4
CPSF2-201ENST00000298875 TUBB2AQ13885 445 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 CCDC174Q6PII3 467 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 TUBB2BQ9BVA1 445 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 SELENOOQ9BVL4 669 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 ALDH1L2Q3SY69 923 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 LRSAM1Q6UWE0 723 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 CCDC121Q6ZUS5 278 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 STXBP4Q6ZWJ1 553 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 ASXL2Q76L83 1435 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 ARHGAP25P42331 645 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 PRDM11Q9NQV5 511 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 ITSN2Q9NZM3 1697 aa6.32□□□□□ -1.4
CPSF2-201ENST00000298875 TTC21AQ8NDW8 1320 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 TSHZ3Q63HK5 1081 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 CTAGE15A4D2H0 777 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 CTAGE8P0CG41 777 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 CAPN2P17655 700 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 CTAGE6Q86UF2 777 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 CTAGE4Q8IX94 777 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 KCNH5Q8NCM2 988 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 PBRM1Q86U86 1689 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 OPA1O60313 960 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 BUB1BO60566 1050 aaPredicted RBP6.31□□□□□ -1.4
CPSF2-201ENST00000298875 TTF1Q15361 905 aaPredicted RBP6.31□□□□□ -1.4
CPSF2-201ENST00000298875 IFT81Q8WYA0 676 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 VAT1LQ9HCJ6 419 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 N4BP3O15049 544 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 MCM6Q14566 821 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 MFSD6Q6ZSS7 791 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 CEP128Q6ZU80 1094 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 CCDC110Q8TBZ0 833 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 RTL1A6NKG5 1358 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 PDE4BQ07343 736 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 KLHL40Q2TBA0 621 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 PLVAPQ9BX97 442 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 ANAPC4Q9UJX5 808 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 KIF1CO43896 1103 aaKnown RBP6.31□□□□□ -1.4
CPSF2-201ENST00000298875 HCLS1P14317 486 aaPredicted RBP6.31□□□□□ -1.4
CPSF2-201ENST00000298875 HAND2P61296 217 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 MAP7D1Q3KQU3 841 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 ZMAT2Q96NC0 199 aaKnown RBP6.31□□□□□ -1.4
CPSF2-201ENST00000298875 ADAMTS12P58397 1594 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 SMIM23A6NLE4 172 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 ZEB2O60315 1214 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 RBBP5Q15291 538 aaKnown RBP6.31□□□□□ -1.4
CPSF2-201ENST00000298875 AFAP1Q8N556 730 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 ARFGAP2Q8N6H7 521 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 SMC6Q96SB8 1091 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 TRMT112Q9UI30 125 aaKnown RBP6.31□□□□□ -1.4
CPSF2-201ENST00000298875 NAIPQ13075 1403 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 ZSCAN22P10073 491 aaPredicted RBP6.31□□□□□ -1.4
CPSF2-201ENST00000298875 ARID5AQ03989 594 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 NOLC1Q14978 699 aaKnown RBP eCLIP6.31□□□□□ -1.4
CPSF2-201ENST00000298875 CCDC102BQ68D86 513 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 ATRIPQ8WXE1 791 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 GOLGA1Q92805 767 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 ZNF219Q9P2Y4 722 aaPredicted RBP6.31□□□□□ -1.4
CPSF2-201ENST00000298875 ACTN2P35609 894 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 SYKP43405 635 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 CAPZA3Q96KX2 299 aa6.31□□□□□ -1.4
CPSF2-201ENST00000298875 HEATR3Q7Z4Q2 680 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 SEC62Q99442 399 aaKnown RBP6.3□□□□□ -1.4
CPSF2-201ENST00000298875 USP16Q9Y5T5 823 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 CAMSAP2Q08AD1 1489 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 SYT1P21579 422 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms