RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 DDX46Q7L014 1031 aaKnown RBP25.8■■□□□ 1.72
SOX17-201ENST00000297316 AK7Q96M32 723 aa25.8■■□□□ 1.72
SOX17-201ENST00000297316 HAUS7Q99871 368 aa25.8■■□□□ 1.72
SOX17-201ENST00000297316 ZPR1O75312 459 aa25.79■■□□□ 1.72
SOX17-201ENST00000297316 RBM6P78332 1123 aaKnown RBP25.79■■□□□ 1.72
SOX17-201ENST00000297316 XAGE2Q96GT9 111 aa25.79■■□□□ 1.72
SOX17-201ENST00000297316 HELBQ8NG08 1087 aaPredicted RBP25.79■■□□□ 1.72
SOX17-201ENST00000297316 A0A0D9SFI3 127 aa25.78■■□□□ 1.72
SOX17-201ENST00000297316 EPB41L2O43491 1005 aaKnown RBP25.78■■□□□ 1.72
SOX17-201ENST00000297316 ZNF772Q68DY9 489 aaPredicted RBP25.78■■□□□ 1.72
SOX17-201ENST00000297316 CIZ1Q9ULV3 898 aaPredicted RBP25.78■■□□□ 1.72
SOX17-201ENST00000297316 PTH1RQ03431 593 aa25.77■■□□□ 1.72
SOX17-201ENST00000297316 CCDC24Q8N4L8 307 aa25.77■■□□□ 1.72
SOX17-201ENST00000297316 VGLL2Q8N8G2 317 aa25.77■■□□□ 1.72
SOX17-201ENST00000297316 AKAP2Q9Y2D5 859 aa25.77■■□□□ 1.72
SOX17-201ENST00000297316 UPF3BQ9BZI7 483 aaKnown RBP25.76■■□□□ 1.71
SOX17-201ENST00000297316 LRP5O75197 1615 aa25.76■■□□□ 1.71
SOX17-201ENST00000297316 ATP2B3Q16720 1220 aa25.76■■□□□ 1.71
SOX17-201ENST00000297316 RASEFQ8IZ41 740 aa25.76■■□□□ 1.71
SOX17-201ENST00000297316 ABCC12Q96J65 1359 aa25.76■■□□□ 1.71
SOX17-201ENST00000297316 GOLIM4O00461 696 aa25.75■■□□□ 1.71
SOX17-201ENST00000297316 MCM4P33991 863 aa25.75■■□□□ 1.71
SOX17-201ENST00000297316 RAB3GAP1Q15042 981 aa25.75■■□□□ 1.71
SOX17-201ENST00000297316 CCDC152Q4G0S7 254 aa25.75■■□□□ 1.71
SOX17-201ENST00000297316 RUFY2Q8WXA3 655 aa25.75■■□□□ 1.71
SOX17-201ENST00000297316 SNAP23O00161 211 aa25.75■■□□□ 1.71
SOX17-201ENST00000297316 SLFNL1Q499Z3 407 aa25.75■■□□□ 1.71
SOX17-201ENST00000297316 TNPO1Q92973 898 aaKnown RBP25.75■■□□□ 1.71
SOX17-201ENST00000297316 SNX14Q9Y5W7 946 aa25.75■■□□□ 1.71
SOX17-201ENST00000297316 UBR3Q6ZT12 1888 aa25.74■■□□□ 1.71
SOX17-201ENST00000297316 IFIT1P09914 478 aaKnown RBP25.74■■□□□ 1.71
SOX17-201ENST00000297316 RFC4P35249 363 aa25.74■■□□□ 1.71
SOX17-201ENST00000297316 TRAPPC3LQ5T215 181 aa25.74■■□□□ 1.71
SOX17-201ENST00000297316 GORABQ5T7V8 394 aa25.74■■□□□ 1.71
SOX17-201ENST00000297316 SETDB2Q96T68 719 aa25.74■■□□□ 1.71
SOX17-201ENST00000297316 SCARF1Q14162 830 aa25.74■■□□□ 1.71
SOX17-201ENST00000297316 KIAA1211Q6ZU35 1233 aa25.74■■□□□ 1.71
SOX17-201ENST00000297316 ZGPATQ8N5A5 531 aaKnown RBP25.74■■□□□ 1.71
SOX17-201ENST00000297316 SNRKQ9NRH2 765 aa25.74■■□□□ 1.71
SOX17-201ENST00000297316 GSE1Q14687 1217 aa25.73■■□□□ 1.71
SOX17-201ENST00000297316 PAG1Q9NWQ8 432 aa25.73■■□□□ 1.71
SOX17-201ENST00000297316 COL24A1Q17RW2 1714 aa25.73■■□□□ 1.71
SOX17-201ENST00000297316 PDE8BO95263 885 aa25.72■■□□□ 1.71
SOX17-201ENST00000297316 GTF2E1P29083 439 aaPredicted RBP25.72■■□□□ 1.71
SOX17-201ENST00000297316 PROM2Q8N271 834 aa25.72■■□□□ 1.71
SOX17-201ENST00000297316 HIP1O00291 1037 aa25.72■■□□□ 1.71
SOX17-201ENST00000297316 TAF5LO75529 589 aa25.72■■□□□ 1.71
SOX17-201ENST00000297316 ZNF589Q86UQ0 364 aaPredicted RBP25.72■■□□□ 1.71
SOX17-201ENST00000297316 MPHOSPH8Q99549 860 aa25.72■■□□□ 1.71
SOX17-201ENST00000297316 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.71■■□□□ 1.71
SOX17-201ENST00000297316 TTC39AQ5SRH9 613 aa25.71■■□□□ 1.71
SOX17-201ENST00000297316 PI16Q6UXB8 463 aa25.71■■□□□ 1.71
SOX17-201ENST00000297316 SEC62Q99442 399 aaKnown RBP25.71■■□□□ 1.71
SOX17-201ENST00000297316 CCDC158Q5M9N0 1113 aa25.71■■□□□ 1.71
SOX17-201ENST00000297316 NOL8Q76FK4 1167 aaKnown RBP25.71■■□□□ 1.71
SOX17-201ENST00000297316 NBPF5PQ86XG9 351 aaPredicted RBP25.71■■□□□ 1.71
SOX17-201ENST00000297316 TMX3Q96JJ7 454 aa25.71■■□□□ 1.71
SOX17-201ENST00000297316 SSFA2P28290 1259 aa25.7■■□□□ 1.71
SOX17-201ENST00000297316 FKBP4Q02790 459 aaKnown RBP eCLIP25.7■■□□□ 1.71
SOX17-201ENST00000297316 KBTBD3Q8NAB2 608 aa25.7■■□□□ 1.71
SOX17-201ENST00000297316 CCDC171Q6TFL3 1326 aa25.69■■□□□ 1.7
SOX17-201ENST00000297316 RGL2O15211 777 aa25.69■■□□□ 1.7
SOX17-201ENST00000297316 RTL9Q8NET4 1388 aa25.69■■□□□ 1.7
SOX17-201ENST00000297316 AKAP11Q9UKA4 1901 aa25.69■■□□□ 1.7
SOX17-201ENST00000297316 MED23Q9ULK4 1368 aa25.68■■□□□ 1.7
SOX17-201ENST00000297316 HSP90B1P14625 803 aaKnown RBP25.68■■□□□ 1.7
SOX17-201ENST00000297316 CCDC129Q6ZRS4 1044 aa25.68■■□□□ 1.7
SOX17-201ENST00000297316 MROH5Q6ZUA9 1318 aa25.68■■□□□ 1.7
SOX17-201ENST00000297316 IGHMBP2P38935 993 aaKnown RBP25.68■■□□□ 1.7
SOX17-201ENST00000297316 PKP1Q13835 747 aa25.68■■□□□ 1.7
SOX17-201ENST00000297316 TXNRD1Q16881 649 aa25.68■■□□□ 1.7
SOX17-201ENST00000297316 SLC27A3Q5K4L6 730 aa25.68■■□□□ 1.7
SOX17-201ENST00000297316 PRPF40BQ6NWY9 871 aaKnown RBP25.68■■□□□ 1.7
SOX17-201ENST00000297316 IL27Q8NEV9 243 aa25.68■■□□□ 1.7
SOX17-201ENST00000297316 RXRBP28702 533 aa25.66■■□□□ 1.7
SOX17-201ENST00000297316 SF3B3Q15393 1217 aaKnown RBP25.66■■□□□ 1.7
SOX17-201ENST00000297316 FGFR2P21802 821 aa25.66■■□□□ 1.7
SOX17-201ENST00000297316 ZAP70P43403 619 aa25.66■■□□□ 1.7
SOX17-201ENST00000297316 NFIXQ14938 502 aa25.66■■□□□ 1.7
SOX17-201ENST00000297316 SLC10A5Q5PT55 438 aa25.66■■□□□ 1.7
SOX17-201ENST00000297316 NYXQ9GZU5 481 aa25.66■■□□□ 1.7
SOX17-201ENST00000297316 RGS17Q9UGC6 210 aaPredicted RBP25.66■■□□□ 1.7
SOX17-201ENST00000297316 MYO5AQ9Y4I1 1855 aaKnown RBP25.66■■□□□ 1.7
SOX17-201ENST00000297316 CPA1P15085 419 aa25.65■■□□□ 1.7
SOX17-201ENST00000297316 MCAMP43121 646 aa25.65■■□□□ 1.7
SOX17-201ENST00000297316 PHKA1P46020 1223 aa25.65■■□□□ 1.7
SOX17-201ENST00000297316 MCM2P49736 904 aa25.65■■□□□ 1.7
SOX17-201ENST00000297316 NECTIN1Q15223 517 aa25.65■■□□□ 1.7
SOX17-201ENST00000297316 PUM3Q15397 648 aaKnown RBP25.65■■□□□ 1.7
SOX17-201ENST00000297316 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.65■■□□□ 1.7
SOX17-201ENST00000297316 RBM8AQ9Y5S9 174 aaKnown RBP25.65■■□□□ 1.7
SOX17-201ENST00000297316 ADCK5Q3MIX3 580 aa25.64■■□□□ 1.7
SOX17-201ENST00000297316 CELF1Q92879 486 aaKnown RBP25.64■■□□□ 1.7
SOX17-201ENST00000297316 KCNB2Q92953 911 aa25.64■■□□□ 1.7
SOX17-201ENST00000297316 WTIPA6NIX2 430 aaPredicted RBP25.64■■□□□ 1.69
SOX17-201ENST00000297316 CHRNDQ07001 517 aa25.64■■□□□ 1.69
SOX17-201ENST00000297316 TPTE2Q6XPS3 522 aa25.64■■□□□ 1.69
SOX17-201ENST00000297316 MAP4K1Q92918 833 aa25.64■■□□□ 1.69
SOX17-201ENST00000297316 TTC14Q96N46 770 aa25.64■■□□□ 1.69
SOX17-201ENST00000297316 ARAP2Q8WZ64 1704 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms