RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ADORA1P30542 326 aa18.77■□□□□ 0.6
NCKIPSD-201ENST00000294129 PIGBQ92521 554 aa18.77■□□□□ 0.6
NCKIPSD-201ENST00000294129 U3KPZ7 1027 aaPredicted RBP18.77■□□□□ 0.6
NCKIPSD-201ENST00000294129 PTMAP06454 111 aaKnown RBP18.77■□□□□ 0.59
NCKIPSD-201ENST00000294129 CEP126Q9P2H0 1117 aa18.77■□□□□ 0.59
NCKIPSD-201ENST00000294129 STOX1Q6ZVD7 989 aa18.76■□□□□ 0.59
NCKIPSD-201ENST00000294129 KIF6Q6ZMV9 814 aa18.76■□□□□ 0.59
NCKIPSD-201ENST00000294129 TMEM87AQ8NBN3 555 aa18.76■□□□□ 0.59
NCKIPSD-201ENST00000294129 LAMB4A4D0S4 1761 aa18.76■□□□□ 0.59
NCKIPSD-201ENST00000294129 KRT32Q14532 448 aa18.75■□□□□ 0.59
NCKIPSD-201ENST00000294129 KCPQ6ZWJ8 1503 aa18.75■□□□□ 0.59
NCKIPSD-201ENST00000294129 PARP4Q9UKK3 1724 aaKnown RBP18.75■□□□□ 0.59
NCKIPSD-201ENST00000294129 NKX1-1Q15270 411 aaPredicted RBP18.75■□□□□ 0.59
NCKIPSD-201ENST00000294129 TCIRG1Q13488 830 aa18.75■□□□□ 0.59
NCKIPSD-201ENST00000294129 WASHC4Q2M389 1173 aa18.75■□□□□ 0.59
NCKIPSD-201ENST00000294129 USPL1Q5W0Q7 1092 aa18.75■□□□□ 0.59
NCKIPSD-201ENST00000294129 PI16Q6UXB8 463 aa18.75■□□□□ 0.59
NCKIPSD-201ENST00000294129 CCT2P78371 535 aaKnown RBP18.74■□□□□ 0.59
NCKIPSD-201ENST00000294129 CAMK4Q16566 473 aa18.74■□□□□ 0.59
NCKIPSD-201ENST00000294129 TTLL5Q6EMB2 1281 aa18.74■□□□□ 0.59
NCKIPSD-201ENST00000294129 TTC6Q86TZ1 520 aa18.74■□□□□ 0.59
NCKIPSD-201ENST00000294129 USP25Q9UHP3 1055 aa18.74■□□□□ 0.59
NCKIPSD-201ENST00000294129 HAND2P61296 217 aa18.74■□□□□ 0.59
NCKIPSD-201ENST00000294129 KRT85P78386 507 aa18.74■□□□□ 0.59
NCKIPSD-201ENST00000294129 TTC39AQ5SRH9 613 aa18.74■□□□□ 0.59
NCKIPSD-201ENST00000294129 ABCC6O95255 1503 aa18.74■□□□□ 0.59
NCKIPSD-201ENST00000294129 CEBPZQ03701 1054 aaKnown RBP18.73■□□□□ 0.59
NCKIPSD-201ENST00000294129 HLFQ16534 295 aa18.73■□□□□ 0.59
NCKIPSD-201ENST00000294129 PDLIM2Q96JY6 352 aa18.73■□□□□ 0.59
NCKIPSD-201ENST00000294129 TAOK2Q9UL54 1235 aa18.73■□□□□ 0.59
NCKIPSD-201ENST00000294129 PDCP20941 246 aa18.73■□□□□ 0.59
NCKIPSD-201ENST00000294129 APOBRQ0VD83 1088 aa18.73■□□□□ 0.59
NCKIPSD-201ENST00000294129 H3BQV1 296 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 CSPP1Q1MSJ5 1256 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 IFFO2Q5TF58 517 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 FAM177BA6PVY3 158 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 SCARF1Q14162 830 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 GTF3C6Q969F1 213 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 ATG3Q9NT62 314 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 MAST3O60307 1309 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 GOLGA6L4A6NEF3 574 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 M0R2C6 588 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 FAM184AQ8NB25 1140 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 XAGE2Q96GT9 111 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 ISCA1Q9BUE6 129 aa18.72■□□□□ 0.59
NCKIPSD-201ENST00000294129 JCADQ9P266 1359 aa18.71■□□□□ 0.59
NCKIPSD-201ENST00000294129 HSPD1P10809 573 aaKnown RBP18.71■□□□□ 0.59
NCKIPSD-201ENST00000294129 IFIT5Q13325 482 aaKnown RBP18.71■□□□□ 0.59
NCKIPSD-201ENST00000294129 TSGA10IPQ3SY00 556 aa18.71■□□□□ 0.59
NCKIPSD-201ENST00000294129 CCDC158Q5M9N0 1113 aa18.71■□□□□ 0.59
NCKIPSD-201ENST00000294129 NCOA5Q9HCD5 579 aaKnown RBP18.71■□□□□ 0.59
NCKIPSD-201ENST00000294129 STARD3NLO95772 234 aa18.71■□□□□ 0.59
NCKIPSD-201ENST00000294129 SCRN1Q12765 414 aa18.71■□□□□ 0.59
NCKIPSD-201ENST00000294129 SH3TC1Q8TE82 1336 aa18.7■□□□□ 0.58
NCKIPSD-201ENST00000294129 RNF113AO15541 343 aaKnown RBP18.7■□□□□ 0.58
NCKIPSD-201ENST00000294129 LIG1P18858 919 aa18.7■□□□□ 0.58
NCKIPSD-201ENST00000294129 ZMYM1Q5SVZ6 1142 aa18.7■□□□□ 0.58
NCKIPSD-201ENST00000294129 OSBP2Q969R2 916 aa18.7■□□□□ 0.58
NCKIPSD-201ENST00000294129 SPATA32Q96LK8 384 aa18.7■□□□□ 0.58
NCKIPSD-201ENST00000294129 TBC1D2BQ9UPU7 963 aa18.7■□□□□ 0.58
NCKIPSD-201ENST00000294129 TJP1Q07157 1748 aa18.7■□□□□ 0.58
NCKIPSD-201ENST00000294129 GUCY1B3Q02153 619 aa18.69■□□□□ 0.58
NCKIPSD-201ENST00000294129 RAB11FIP4Q86YS3 637 aa18.69■□□□□ 0.58
NCKIPSD-201ENST00000294129 METTL24Q5JXM2 366 aa18.69■□□□□ 0.58
NCKIPSD-201ENST00000294129 NUP188Q5SRE5 1749 aa18.69■□□□□ 0.58
NCKIPSD-201ENST00000294129 ZAP70P43403 619 aa18.69■□□□□ 0.58
NCKIPSD-201ENST00000294129 GREM2Q9H772 168 aa18.69■□□□□ 0.58
NCKIPSD-201ENST00000294129 GPHNQ9NQX3 736 aaPredicted RBP18.69■□□□□ 0.58
NCKIPSD-201ENST00000294129 HELLSQ9NRZ9 838 aa18.69■□□□□ 0.58
NCKIPSD-201ENST00000294129 E7EWF7 191 aa18.68■□□□□ 0.58
NCKIPSD-201ENST00000294129 LDHAL6AQ6ZMR3 332 aa18.68■□□□□ 0.58
NCKIPSD-201ENST00000294129 DHX32Q7L7V1 743 aaKnown RBP18.68■□□□□ 0.58
NCKIPSD-201ENST00000294129 CKAP2LQ8IYA6 745 aa18.68■□□□□ 0.58
NCKIPSD-201ENST00000294129 ZNF830Q96NB3 372 aaPredicted RBP18.68■□□□□ 0.58
NCKIPSD-201ENST00000294129 GPR108Q9NPR9 543 aa18.68■□□□□ 0.58
NCKIPSD-201ENST00000294129 ZBTB1Q9Y2K1 713 aa18.68■□□□□ 0.58
NCKIPSD-201ENST00000294129 UBR2Q8IWV8 1755 aa18.68■□□□□ 0.58
NCKIPSD-201ENST00000294129 PALLDQ8WX93 1383 aa18.68■□□□□ 0.58
NCKIPSD-201ENST00000294129 HSP90AA2PQ14568 343 aaPredicted RBP18.68■□□□□ 0.58
NCKIPSD-201ENST00000294129 CNNM1Q9NRU3 951 aa18.68■□□□□ 0.58
NCKIPSD-201ENST00000294129 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.68■□□□□ 0.58
NCKIPSD-201ENST00000294129 PLEKHG2Q9H7P9 1386 aa18.67■□□□□ 0.58
NCKIPSD-201ENST00000294129 CIAO1O76071 339 aa18.67■□□□□ 0.58
NCKIPSD-201ENST00000294129 ITGA6P23229 1130 aa18.67■□□□□ 0.58
NCKIPSD-201ENST00000294129 NOL7Q9UMY1 257 aaKnown RBP18.67■□□□□ 0.58
NCKIPSD-201ENST00000294129 ZBTB38Q8NAP3 1195 aaPredicted RBP18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 BICD2Q8TD16 824 aa18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 SLC4A9Q96Q91 983 aa18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 TRMT112Q9UI30 125 aaKnown RBP18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 TNS2Q63HR2 1409 aa18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 PCCAP05165 728 aaPredicted RBP18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 HELBQ8NG08 1087 aaPredicted RBP18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 DACT1Q9NYF0 836 aa18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 CCDC39Q9UFE4 941 aa18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 RFX7Q2KHR2 1363 aa18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 MAP3K15Q6ZN16 1313 aa18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 DSCC1Q9BVC3 393 aa18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 FTOQ9C0B1 505 aaKnown RBP eCLIP18.66■□□□□ 0.58
NCKIPSD-201ENST00000294129 ALDH8A1Q9H2A2 487 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms