RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 METTL22Q9BUU2 404 aaPredicted RBP14.2□□□□□ -0.14
CLPB-201ENST00000294053 TRIM34Q9BYJ4 488 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 NUP62CLQ9H1M0 184 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 CRYBG1Q9Y4K1 1723 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 TNS3Q68CZ2 1445 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 SNRPA1P09661 255 aaKnown RBP14.2□□□□□ -0.14
CLPB-201ENST00000294053 NMIQ13287 307 aaPredicted RBP14.2□□□□□ -0.14
CLPB-201ENST00000294053 MAP3K11Q16584 847 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 BRINP3Q76B58 766 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 DCAF5Q96JK2 942 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 TTC14Q96N46 770 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 UTYO14607 1347 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 A0A087WWV3 80 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 CADPS2Q86UW7 1296 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 DACT1Q9NYF0 836 aa14.2□□□□□ -0.14
CLPB-201ENST00000294053 SMTNL1A8MU46 457 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 TPM3P06753 285 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 LIG1P18858 919 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 TYRO3Q06418 890 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 JAKMIP1Q96N16 626 aaKnown RBP14.19□□□□□ -0.14
CLPB-201ENST00000294053 DNAJC25Q9H1X3 360 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 NBPF26B4DH59 902 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 TERF2Q15554 542 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 SLFNL1Q499Z3 407 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 NBPF14Q5TI25 921 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 NBPF10Q6P3W6 841 aaKnown RBP14.19□□□□□ -0.14
CLPB-201ENST00000294053 TTLL7Q6ZT98 887 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 TOM1L2Q6ZVM7 507 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 NBPF15Q8N660 670 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 PRDM11Q9NQV5 511 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 DDX41Q9UJV9 622 aaKnown RBP14.19□□□□□ -0.14
CLPB-201ENST00000294053 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.19□□□□□ -0.14
CLPB-201ENST00000294053 A1BGP04217 495 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 STK3Q13188 491 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 ZNF589Q86UQ0 364 aaPredicted RBP14.19□□□□□ -0.14
CLPB-201ENST00000294053 KIF18AQ8NI77 898 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 STRN4Q9NRL3 753 aa14.19□□□□□ -0.14
CLPB-201ENST00000294053 A0A087WZG4 1122 aa14.18□□□□□ -0.14
CLPB-201ENST00000294053 PDIA4P13667 645 aaKnown RBP14.18□□□□□ -0.14
CLPB-201ENST00000294053 FAM200AQ8TCP9 573 aa14.18□□□□□ -0.14
CLPB-201ENST00000294053 FMNL2Q96PY5 1086 aa14.18□□□□□ -0.14
CLPB-201ENST00000294053 GOLGA6L19H0YKK7 550 aa14.18□□□□□ -0.14
CLPB-201ENST00000294053 CTIFO43310 598 aaKnown RBP14.18□□□□□ -0.14
CLPB-201ENST00000294053 TFCP2Q12800 502 aa14.18□□□□□ -0.14
CLPB-201ENST00000294053 PTPN14Q15678 1187 aa14.18□□□□□ -0.14
CLPB-201ENST00000294053 KMT5BQ4FZB7 885 aa14.18□□□□□ -0.14
CLPB-201ENST00000294053 ZSCAN25Q6NSZ9 544 aa14.18□□□□□ -0.14
CLPB-201ENST00000294053 CACTINQ8WUQ7 758 aaKnown RBP14.18□□□□□ -0.14
CLPB-201ENST00000294053 DBNLQ9UJU6 430 aaKnown RBP14.18□□□□□ -0.14
CLPB-201ENST00000294053 KAT6BQ8WYB5 2073 aa14.18□□□□□ -0.14
CLPB-201ENST00000294053 USP27XA6NNY8 438 aa14.17□□□□□ -0.14
CLPB-201ENST00000294053 PTPN12Q05209 780 aaKnown RBP14.17□□□□□ -0.14
CLPB-201ENST00000294053 LARP1BQ659C4 914 aaKnown RBP14.17□□□□□ -0.14
CLPB-201ENST00000294053 ERC1Q8IUD2 1116 aa14.17□□□□□ -0.14
CLPB-201ENST00000294053 FSD1Q9BTV5 496 aa14.17□□□□□ -0.14
CLPB-201ENST00000294053 CBX8Q9HC52 389 aa14.17□□□□□ -0.14
CLPB-201ENST00000294053 ZNF330Q9Y3S2 320 aaPredicted RBP14.17□□□□□ -0.14
CLPB-201ENST00000294053 RPAP1Q9BWH6 1393 aaPredicted RBP14.17□□□□□ -0.14
CLPB-201ENST00000294053 ZNF165P49910 485 aa14.17□□□□□ -0.14
CLPB-201ENST00000294053 GABPB1Q06547 395 aaPredicted RBP14.17□□□□□ -0.14
CLPB-201ENST00000294053 LIMCH1Q9UPQ0 1083 aa14.17□□□□□ -0.14
CLPB-201ENST00000294053 RBM8AQ9Y5S9 174 aaKnown RBP14.17□□□□□ -0.14
CLPB-201ENST00000294053 PPFIA3O75145 1194 aa14.17□□□□□ -0.14
CLPB-201ENST00000294053 EVI5LQ96CN4 794 aa14.17□□□□□ -0.14
CLPB-201ENST00000294053 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
CLPB-201ENST00000294053 TMX1Q9H3N1 280 aa14.17□□□□□ -0.14
CLPB-201ENST00000294053 ZBTB3Q9H5J0 574 aa14.17□□□□□ -0.14
CLPB-201ENST00000294053 RFX5P48382 616 aaPredicted RBP14.16□□□□□ -0.14
CLPB-201ENST00000294053 IL17RAQ96F46 866 aa14.16□□□□□ -0.14
CLPB-201ENST00000294053 CCDC171Q6TFL3 1326 aa14.16□□□□□ -0.14
CLPB-201ENST00000294053 ST3GAL1Q11201 340 aa14.16□□□□□ -0.14
CLPB-201ENST00000294053 SEC62Q99442 399 aaKnown RBP14.16□□□□□ -0.14
CLPB-201ENST00000294053 BECN2A8MW95 431 aa14.15□□□□□ -0.14
CLPB-201ENST00000294053 CCDC129Q6ZRS4 1044 aa14.15□□□□□ -0.14
CLPB-201ENST00000294053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.15□□□□□ -0.14
CLPB-201ENST00000294053 AFDNP55196 1824 aaKnown RBP14.15□□□□□ -0.14
CLPB-201ENST00000294053 FBXO38Q6PIJ6 1188 aa14.15□□□□□ -0.14
CLPB-201ENST00000294053 LMBR1LQ6UX01 489 aa14.15□□□□□ -0.14
CLPB-201ENST00000294053 PAXIP1Q6ZW49 1069 aaPredicted RBP14.15□□□□□ -0.14
CLPB-201ENST00000294053 DNAJC2Q99543 621 aaKnown RBP14.15□□□□□ -0.14
CLPB-201ENST00000294053 DBNDD2Q9BQY9 259 aa14.15□□□□□ -0.14
CLPB-201ENST00000294053 NOL10Q9BSC4 688 aaKnown RBP14.15□□□□□ -0.14
CLPB-201ENST00000294053 SKILP12757 684 aa14.15□□□□□ -0.14
CLPB-201ENST00000294053 NECTIN1Q15223 517 aa14.15□□□□□ -0.14
CLPB-201ENST00000294053 AEBP2Q6ZN18 517 aaPredicted RBP14.15□□□□□ -0.14
CLPB-201ENST00000294053 IPO4Q8TEX9 1081 aaKnown RBP14.15□□□□□ -0.14
CLPB-201ENST00000294053 ERCC4Q92889 916 aaPredicted RBP14.15□□□□□ -0.14
CLPB-201ENST00000294053 COL15A1P39059 1388 aa14.14□□□□□ -0.15
CLPB-201ENST00000294053 CCDC144BQ3MJ40 725 aa14.14□□□□□ -0.15
CLPB-201ENST00000294053 CREB3L3Q68CJ9 461 aa14.14□□□□□ -0.15
CLPB-201ENST00000294053 CCDC144CPQ8IYA2 1237 aa14.14□□□□□ -0.15
CLPB-201ENST00000294053 ZNF594Q96JF6 807 aaPredicted RBP14.14□□□□□ -0.15
CLPB-201ENST00000294053 CCDC85AQ96PX6 553 aaPredicted RBP14.14□□□□□ -0.15
CLPB-201ENST00000294053 PAXBP1Q9Y5B6 917 aa14.14□□□□□ -0.15
CLPB-201ENST00000294053 MRVI1Q9Y6F6 885 aa14.14□□□□□ -0.15
CLPB-201ENST00000294053 TTC6Q86TZ1 520 aa14.14□□□□□ -0.15
CLPB-201ENST00000294053 KRT85P78386 507 aa14.13□□□□□ -0.15
CLPB-201ENST00000294053 ZCRB1Q8TBF4 217 aaKnown RBP14.13□□□□□ -0.15
CLPB-201ENST00000294053 PDRG1Q9NUG6 133 aa14.13□□□□□ -0.15
CLPB-201ENST00000294053 GLI3P10071 1580 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms