RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 PHF8Q9UPP1 1060 aa17.22■□□□□ 0.35
CCNF-201ENST00000293968 OTUD7BQ6GQQ9 843 aa17.22■□□□□ 0.35
CCNF-201ENST00000293968 DBNDD2Q9BQY9 259 aa17.22■□□□□ 0.35
CCNF-201ENST00000293968 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
CCNF-201ENST00000293968 SPATA31D1Q6ZQQ2 1576 aa17.22■□□□□ 0.35
CCNF-201ENST00000293968 KIF20AO95235 890 aa17.21■□□□□ 0.35
CCNF-201ENST00000293968 COPS6Q7L5N1 327 aa17.21■□□□□ 0.35
CCNF-201ENST00000293968 NAT10Q9H0A0 1025 aaKnown RBP17.21■□□□□ 0.35
CCNF-201ENST00000293968 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.35
CCNF-201ENST00000293968 A0A1B0GVL5 298 aa17.21■□□□□ 0.35
CCNF-201ENST00000293968 GOLIM4O00461 696 aa17.21■□□□□ 0.35
CCNF-201ENST00000293968 CYP21A2P08686 494 aa17.21■□□□□ 0.35
CCNF-201ENST00000293968 STK38Q15208 465 aa17.21■□□□□ 0.35
CCNF-201ENST00000293968 GOLPH3LQ9H4A5 285 aa17.21■□□□□ 0.35
CCNF-201ENST00000293968 EPHA10Q5JZY3 1008 aa17.21■□□□□ 0.35
CCNF-201ENST00000293968 TMC6Q7Z403 805 aa17.21■□□□□ 0.35
CCNF-201ENST00000293968 SETD1BQ9UPS6 1966 aaKnown RBP17.21■□□□□ 0.35
CCNF-201ENST00000293968 NRDCO43847 1150 aa17.21■□□□□ 0.34
CCNF-201ENST00000293968 KAZALD1Q96I82 304 aa17.21■□□□□ 0.34
CCNF-201ENST00000293968 NRXN3Q9Y4C0 1643 aa17.2■□□□□ 0.34
CCNF-201ENST00000293968 DBNLQ9UJU6 430 aaKnown RBP17.2■□□□□ 0.34
CCNF-201ENST00000293968 CTAGE5O15320 804 aa17.2■□□□□ 0.34
CCNF-201ENST00000293968 MCMDC2Q4G0Z9 681 aa17.2■□□□□ 0.34
CCNF-201ENST00000293968 PTPRUQ92729 1446 aa17.2■□□□□ 0.34
CCNF-201ENST00000293968 AKAP12Q02952 1782 aa17.19■□□□□ 0.34
CCNF-201ENST00000293968 CAVIN2O95810 425 aa17.19■□□□□ 0.34
CCNF-201ENST00000293968 SNW1Q13573 536 aaKnown RBP17.18■□□□□ 0.34
CCNF-201ENST00000293968 FAM177A1Q8N128 213 aaPredicted RBP17.18■□□□□ 0.34
CCNF-201ENST00000293968 NEMFO60524 1076 aa17.18■□□□□ 0.34
CCNF-201ENST00000293968 IQCB1Q15051 598 aa17.18■□□□□ 0.34
CCNF-201ENST00000293968 TNNI3KQ59H18 835 aa17.18■□□□□ 0.34
CCNF-201ENST00000293968 KRT222Q8N1A0 295 aa17.18■□□□□ 0.34
CCNF-201ENST00000293968 FPGT-TNNI3KV9GXZ4 949 aa17.18■□□□□ 0.34
CCNF-201ENST00000293968 ZNF397Q8NF99 534 aaPredicted RBP17.18■□□□□ 0.34
CCNF-201ENST00000293968 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
CCNF-201ENST00000293968 IGKV5-2P06315 115 aa17.18■□□□□ 0.34
CCNF-201ENST00000293968 HAND2P61296 217 aa17.18■□□□□ 0.34
CCNF-201ENST00000293968 TPM4P67936 248 aa17.18■□□□□ 0.34
CCNF-201ENST00000293968 SYT10Q6XYQ8 523 aa17.18■□□□□ 0.34
CCNF-201ENST00000293968 IFNKQ9P0W0 207 aa17.18■□□□□ 0.34
CCNF-201ENST00000293968 FAM160A1Q05DH4 1040 aa17.17■□□□□ 0.34
CCNF-201ENST00000293968 DDX21Q9NR30 783 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCNF-201ENST00000293968 MRFAP1L1Q96HT8 127 aa17.17■□□□□ 0.34
CCNF-201ENST00000293968 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
CCNF-201ENST00000293968 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.17■□□□□ 0.34
CCNF-201ENST00000293968 SFPQP23246 707 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCNF-201ENST00000293968 AMOTQ4VCS5 1084 aa17.17■□□□□ 0.34
CCNF-201ENST00000293968 KMT5BQ4FZB7 885 aa17.16■□□□□ 0.34
CCNF-201ENST00000293968 DHX32Q7L7V1 743 aaKnown RBP17.16■□□□□ 0.34
CCNF-201ENST00000293968 CEMIPQ8WUJ3 1361 aa17.16■□□□□ 0.34
CCNF-201ENST00000293968 A0A087WZG4 1122 aa17.16■□□□□ 0.34
CCNF-201ENST00000293968 CPLX1O14810 134 aa17.16■□□□□ 0.34
CCNF-201ENST00000293968 SLU7O95391 586 aaKnown RBP17.16■□□□□ 0.34
CCNF-201ENST00000293968 GNL2Q13823 731 aaKnown RBP17.16■□□□□ 0.34
CCNF-201ENST00000293968 GCKRQ14397 625 aa17.16■□□□□ 0.34
CCNF-201ENST00000293968 NSUN7Q8NE18 718 aaKnown RBP17.16■□□□□ 0.34
CCNF-201ENST00000293968 DDX41Q9UJV9 622 aaKnown RBP17.16■□□□□ 0.34
CCNF-201ENST00000293968 SETD1AO15047 1707 aaKnown RBP17.16■□□□□ 0.34
CCNF-201ENST00000293968 RBM43Q6ZSC3 357 aaKnown RBP17.16■□□□□ 0.34
CCNF-201ENST00000293968 CCAR2Q8N163 923 aaKnown RBP17.16■□□□□ 0.34
CCNF-201ENST00000293968 ANKRD24Q8TF21 1146 aa17.16■□□□□ 0.34
CCNF-201ENST00000293968 NEURL1BA8MQ27 555 aa17.15■□□□□ 0.34
CCNF-201ENST00000293968 WASHC4Q2M389 1173 aa17.15■□□□□ 0.34
CCNF-201ENST00000293968 SYNE3Q6ZMZ3 975 aa17.15■□□□□ 0.34
CCNF-201ENST00000293968 MRPS27Q92552 414 aaKnown RBP17.15■□□□□ 0.34
CCNF-201ENST00000293968 NLRP2Q9NX02 1062 aa17.15■□□□□ 0.34
CCNF-201ENST00000293968 A0A0G2JLW4 131 aa17.15■□□□□ 0.34
CCNF-201ENST00000293968 LMOD1P29536 600 aaPredicted RBP17.15■□□□□ 0.34
CCNF-201ENST00000293968 FBXO38Q6PIJ6 1188 aa17.15■□□□□ 0.34
CCNF-201ENST00000293968 STOX1Q6ZVD7 989 aa17.15■□□□□ 0.34
CCNF-201ENST00000293968 ZNF330Q9Y3S2 320 aaPredicted RBP17.15■□□□□ 0.34
CCNF-201ENST00000293968 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
CCNF-201ENST00000293968 NPHP4O75161 1426 aaPredicted RBP17.15■□□□□ 0.34
CCNF-201ENST00000293968 TMX1Q9H3N1 280 aa17.15■□□□□ 0.34
CCNF-201ENST00000293968 TBX22Q9Y458 520 aa17.15■□□□□ 0.34
CCNF-201ENST00000293968 FAM208AQ9UK61 1670 aaKnown RBP17.15■□□□□ 0.34
CCNF-201ENST00000293968 FKBP4Q02790 459 aaKnown RBP eCLIP17.14■□□□□ 0.34
CCNF-201ENST00000293968 ERCC6LQ2NKX8 1250 aa17.14■□□□□ 0.34
CCNF-201ENST00000293968 ANKRD13DQ6ZTN6 518 aa17.14■□□□□ 0.34
CCNF-201ENST00000293968 TTC5Q8N0Z6 440 aa17.14■□□□□ 0.34
CCNF-201ENST00000293968 ATP5JP18859 108 aa17.14■□□□□ 0.33
CCNF-201ENST00000293968 TIMM10P62072 90 aa17.14■□□□□ 0.33
CCNF-201ENST00000293968 PTPN21Q16825 1174 aa17.14■□□□□ 0.33
CCNF-201ENST00000293968 DHX40Q8IX18 779 aaKnown RBP17.14■□□□□ 0.33
CCNF-201ENST00000293968 ST7Q9NRC1 585 aa17.14■□□□□ 0.33
CCNF-201ENST00000293968 RGPD1P0DJD0 1748 aa17.14■□□□□ 0.33
CCNF-201ENST00000293968 CDC25BP30305 580 aa17.14■□□□□ 0.33
CCNF-201ENST00000293968 ZC3H6P61129 1189 aaKnown RBP17.14■□□□□ 0.33
CCNF-201ENST00000293968 KLHL34Q8N239 644 aa17.14■□□□□ 0.33
CCNF-201ENST00000293968 XPO4Q9C0E2 1151 aaKnown RBP17.14■□□□□ 0.33
CCNF-201ENST00000293968 SNRKQ9NRH2 765 aa17.14■□□□□ 0.33
CCNF-201ENST00000293968 CSB-PGBD3P0DP91 1061 aa17.14■□□□□ 0.33
CCNF-201ENST00000293968 RCOR1Q9UKL0 485 aa17.14■□□□□ 0.33
CCNF-201ENST00000293968 PFKFB2O60825 505 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 DPCR1Q3MIW9 517 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 HSP90AA4PQ58FG1 418 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 TTLL5Q6EMB2 1281 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 NFATC2IPQ8NCF5 419 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 ERO1AQ96HE7 468 aa17.13■□□□□ 0.33
CCNF-201ENST00000293968 GPHNQ9NQX3 736 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms