RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 SDSP20132 328 aa18.37■□□□□ 0.53
SSRP1-202ENST00000293880 F8W031 263 aaPredicted RBP18.36■□□□□ 0.53
SSRP1-202ENST00000293880 PSMC4P43686 418 aa18.36■□□□□ 0.53
SSRP1-202ENST00000293880 WDR66Q8TBY9 1149 aa18.36■□□□□ 0.53
SSRP1-202ENST00000293880 ECHDC1Q9NTX5 307 aa18.36■□□□□ 0.53
SSRP1-202ENST00000293880 EEF2P13639 858 aaKnown RBP18.36■□□□□ 0.53
SSRP1-202ENST00000293880 GRIPAP1Q4V328 841 aa18.36■□□□□ 0.53
SSRP1-202ENST00000293880 RABEP2Q9H5N1 569 aa18.36■□□□□ 0.53
SSRP1-202ENST00000293880 FAM170AA1A519 330 aa18.36■□□□□ 0.53
SSRP1-202ENST00000293880 SYT10Q6XYQ8 523 aa18.36■□□□□ 0.53
SSRP1-202ENST00000293880 GUCA1BQ9UMX6 200 aa18.36■□□□□ 0.53
SSRP1-202ENST00000293880 ARFGAP3Q9NP61 516 aa18.36■□□□□ 0.53
SSRP1-202ENST00000293880 CTAGE9A4FU28 777 aa18.35■□□□□ 0.53
SSRP1-202ENST00000293880 C6orf229H3BNL8 230 aa18.35■□□□□ 0.53
SSRP1-202ENST00000293880 DACT1Q9NYF0 836 aa18.35■□□□□ 0.53
SSRP1-202ENST00000293880 GBP6Q6ZN66 633 aa18.35■□□□□ 0.53
SSRP1-202ENST00000293880 FEZ1Q99689 392 aa18.35■□□□□ 0.53
SSRP1-202ENST00000293880 NSRP1Q9H0G5 558 aaKnown RBP18.35■□□□□ 0.53
SSRP1-202ENST00000293880 RTL1A6NKG5 1358 aa18.35■□□□□ 0.53
SSRP1-202ENST00000293880 CCDC25Q86WR0 208 aa18.35■□□□□ 0.53
SSRP1-202ENST00000293880 IQCGQ9H095 443 aaKnown RBP18.35■□□□□ 0.53
SSRP1-202ENST00000293880 FAM212AQ96EL1 285 aa18.35■□□□□ 0.53
SSRP1-202ENST00000293880 MCM5P33992 734 aa18.34■□□□□ 0.53
SSRP1-202ENST00000293880 ZNF569Q5MCW4 686 aa18.34■□□□□ 0.53
SSRP1-202ENST00000293880 CCDC129Q6ZRS4 1044 aa18.34■□□□□ 0.53
SSRP1-202ENST00000293880 CCDC121Q6ZUS5 278 aa18.34■□□□□ 0.53
SSRP1-202ENST00000293880 PICALMQ13492 652 aa18.34■□□□□ 0.53
SSRP1-202ENST00000293880 PDE1CQ14123 709 aaPredicted RBP18.34■□□□□ 0.53
SSRP1-202ENST00000293880 TTF1Q15361 905 aaPredicted RBP18.34■□□□□ 0.53
SSRP1-202ENST00000293880 RXRAP19793 462 aa18.34■□□□□ 0.53
SSRP1-202ENST00000293880 GOLGA1Q92805 767 aa18.34■□□□□ 0.53
SSRP1-202ENST00000293880 KCNK9Q9NPC2 374 aa18.34■□□□□ 0.53
SSRP1-202ENST00000293880 CALM1P0DP23 149 aa18.34■□□□□ 0.53
SSRP1-202ENST00000293880 CALM2P0DP24 149 aa18.34■□□□□ 0.53
SSRP1-202ENST00000293880 CALM3P0DP25 149 aa18.34■□□□□ 0.53
SSRP1-202ENST00000293880 LMOD1P29536 600 aaPredicted RBP18.34■□□□□ 0.53
SSRP1-202ENST00000293880 IFIT1BQ5T764 474 aaKnown RBP18.34■□□□□ 0.53
SSRP1-202ENST00000293880 UBE3BQ7Z3V4 1068 aa18.34■□□□□ 0.53
SSRP1-202ENST00000293880 KIAA0586Q9BVV6 1533 aa18.33■□□□□ 0.53
SSRP1-202ENST00000293880 TOP2BQ02880 1626 aa18.33■□□□□ 0.53
SSRP1-202ENST00000293880 TSPY3P0CV98 308 aa18.33■□□□□ 0.53
SSRP1-202ENST00000293880 TSPY8P0CW00 308 aa18.33■□□□□ 0.53
SSRP1-202ENST00000293880 NUCB1Q02818 461 aa18.33■□□□□ 0.53
SSRP1-202ENST00000293880 CCDC174Q6PII3 467 aa18.33■□□□□ 0.53
SSRP1-202ENST00000293880 PABPN1LA6NDY0 278 aaKnown RBP18.33■□□□□ 0.53
SSRP1-202ENST00000293880 KIF5BP33176 963 aa18.33■□□□□ 0.53
SSRP1-202ENST00000293880 UBXN1Q04323 297 aa18.33■□□□□ 0.53
SSRP1-202ENST00000293880 WTAPQ15007 396 aa18.33■□□□□ 0.53
SSRP1-202ENST00000293880 RASAL2Q9UJF2 1139 aa18.33■□□□□ 0.53
SSRP1-202ENST00000293880 SLC4A4Q9Y6R1 1079 aa18.33■□□□□ 0.53
SSRP1-202ENST00000293880 RPGRIP1LQ68CZ1 1315 aa18.33■□□□□ 0.52
SSRP1-202ENST00000293880 KANK3Q6NY19 840 aa18.33■□□□□ 0.52
SSRP1-202ENST00000293880 EHBP1Q8NDI1 1231 aa18.33■□□□□ 0.52
SSRP1-202ENST00000293880 TMEM87AQ8NBN3 555 aa18.33■□□□□ 0.52
SSRP1-202ENST00000293880 MRRFQ96E11 262 aaKnown RBP18.33■□□□□ 0.52
SSRP1-202ENST00000293880 NGLY1Q96IV0 654 aa18.33■□□□□ 0.52
SSRP1-202ENST00000293880 FAM114A2Q9NRY5 505 aa18.33■□□□□ 0.52
SSRP1-202ENST00000293880 IFI16Q16666 785 aaKnown RBP18.33■□□□□ 0.52
SSRP1-202ENST00000293880 GPIHBP1Q8IV16 184 aa18.33■□□□□ 0.52
SSRP1-202ENST00000293880 MIPOL1Q8TD10 442 aa18.33■□□□□ 0.52
SSRP1-202ENST00000293880 PLB1Q6P1J6 1458 aa18.32■□□□□ 0.52
SSRP1-202ENST00000293880 PTPRCP08575 1304 aa18.32■□□□□ 0.52
SSRP1-202ENST00000293880 RMND1Q9NWS8 449 aa18.32■□□□□ 0.52
SSRP1-202ENST00000293880 PDE4BQ07343 736 aa18.32■□□□□ 0.52
SSRP1-202ENST00000293880 SF3A3Q12874 501 aaKnown RBP eCLIP18.32■□□□□ 0.529e-7■■■■■ 44.5
SSRP1-202ENST00000293880 EFCAB5A4FU69 1503 aa18.32■□□□□ 0.52
SSRP1-202ENST00000293880 CFAP58Q5T655 872 aa18.32■□□□□ 0.52
SSRP1-202ENST00000293880 CYLC1P35663 651 aaPredicted RBP18.32■□□□□ 0.52
SSRP1-202ENST00000293880 ASIC1P78348 528 aa18.32■□□□□ 0.52
SSRP1-202ENST00000293880 LDHAL6AQ6ZMR3 332 aa18.32■□□□□ 0.52
SSRP1-202ENST00000293880 SELENOOQ9BVL4 669 aa18.32■□□□□ 0.52
SSRP1-202ENST00000293880 ZBTB21Q9ULJ3 1066 aa18.32■□□□□ 0.52
SSRP1-202ENST00000293880 ACTN2P35609 894 aa18.32■□□□□ 0.52
SSRP1-202ENST00000293880 KRBA2Q6ZNG9 492 aa18.32■□□□□ 0.52
SSRP1-202ENST00000293880 FOXO3O43524 673 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 UBLCP1Q8WVY7 318 aaPredicted RBP18.31■□□□□ 0.52
SSRP1-202ENST00000293880 RBM8AQ9Y5S9 174 aaKnown RBP18.31■□□□□ 0.52
SSRP1-202ENST00000293880 PI4KAP2A4QPH2 592 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 IVLP07476 585 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 BMP2KLQ5H9B9 411 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 PI4KAP1Q8N8J0 262 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 CWC25Q9NXE8 425 aaPredicted RBP18.31■□□□□ 0.52
SSRP1-202ENST00000293880 TIAM1Q13009 1591 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 SPAG5Q96R06 1193 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 PPP1R9BQ96SB3 815 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 F13A1P00488 732 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 STX8Q9UNK0 236 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 ZWINTO95229 277 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 CCDC114Q96M63 670 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 TNNQ9UQP3 1299 aa18.31■□□□□ 0.52
SSRP1-202ENST00000293880 MCM7P33993 719 aa18.3■□□□□ 0.52
SSRP1-202ENST00000293880 SEC62Q99442 399 aaKnown RBP18.3■□□□□ 0.52
SSRP1-202ENST00000293880 FAM135AQ9P2D6 1515 aa18.3■□□□□ 0.52
SSRP1-202ENST00000293880 OPA1O60313 960 aa18.3■□□□□ 0.52
SSRP1-202ENST00000293880 NMIQ13287 307 aaPredicted RBP18.3■□□□□ 0.52
SSRP1-202ENST00000293880 MRPS27Q92552 414 aaKnown RBP18.3■□□□□ 0.52
SSRP1-202ENST00000293880 ADGRL1O94910 1474 aa18.3■□□□□ 0.52
SSRP1-202ENST00000293880 TLDC2A0PJX2 215 aa18.3■□□□□ 0.52
SSRP1-202ENST00000293880 ZBTB16Q05516 673 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms