RNA–Protein interactions for RNA: ENST00000293373.10

NCKAP1L-201, Transcript of NCK associated protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1L, Length 9,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-201ENST00000293373 ALDH1B1P30837 517 aa9.11□□□□□ -0.95
NCKAP1L-201ENST00000293373 C16orf71Q8IYS4 520 aaPredicted RBP9.11□□□□□ -0.95
NCKAP1L-201ENST00000293373 TTC6Q86TZ1 520 aa9.11□□□□□ -0.95
NCKAP1L-201ENST00000293373 PDCL3Q9H2J4 239 aa9.11□□□□□ -0.95
NCKAP1L-201ENST00000293373 MATR3P43243 847 aaKnown RBP eCLIP9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 LGR6Q9HBX8 967 aa9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 KIF1BO60333 1816 aa9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 CDK12Q9NYV4 1490 aaPredicted RBP9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 USP16Q9Y5T5 823 aa9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 IGSF1Q8N6C5 1336 aa9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 CDC42BPAQ5VT25 1732 aa9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 ZNF335Q9H4Z2 1342 aaPredicted RBP9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 CDR1P51861 262 aa9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 PICALMQ13492 652 aa9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 MNS1Q8NEH6 495 aa9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 ARGLU1Q9NWB6 273 aaPredicted RBP9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 GLI2P10070 1586 aa9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 NMIQ13287 307 aaPredicted RBP9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 ARHGEF25Q86VW2 580 aa9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 RNF17Q9BXT8 1623 aaKnown RBP9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 TRIM35Q9UPQ4 493 aa9.1□□□□□ -0.95
NCKAP1L-201ENST00000293373 AGLP35573 1532 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 KRI1Q8N9T8 703 aaKnown RBP9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 ZBTB40Q9NUA8 1239 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 IGHDP01880 384 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 SDSP20132 328 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 AMPD3Q01432 767 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 ZNF496Q96IT1 587 aaPredicted RBP9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 ESYT1Q9BSJ8 1104 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 ACBD3Q9H3P7 528 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 VEZTQ9HBM0 779 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 CROCC2H7BZ55 1655 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 STXBP4Q6ZWJ1 553 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 UNC5CLQ8IV45 518 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 CAGE1Q8TC20 777 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 TNS3Q68CZ2 1445 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 F8W031 263 aaPredicted RBP9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 HIBADHP31937 336 aaKnown RBP9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 IFIT1BQ5T764 474 aaKnown RBP9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 DNAJC10Q8IXB1 793 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 QTRT2Q9H974 415 aaKnown RBP9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 CLEC11AQ9Y240 323 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 ARHGEF40Q8TER5 1519 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 PA2G4Q9UQ80 394 aaKnown RBP9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 CCDC171Q6TFL3 1326 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 CTAGE5O15320 804 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 POTEJP0CG39 1038 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 RXRBP28702 533 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 GCKRQ14397 625 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 WDR78Q5VTH9 848 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 CALML4Q96GE6 196 aa9.09□□□□□ -0.95
NCKAP1L-201ENST00000293373 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.09□□□□□ -0.956e-7■■■■■ 88.1
NCKAP1L-201ENST00000293373 FGFR1OPO95684 399 aaKnown RBP9.09□□□□□ -0.96
NCKAP1L-201ENST00000293373 HAND2P61296 217 aa9.09□□□□□ -0.96
NCKAP1L-201ENST00000293373 MICU3Q86XE3 530 aa9.09□□□□□ -0.96
NCKAP1L-201ENST00000293373 NAP1L4Q99733 375 aaKnown RBP9.09□□□□□ -0.96
NCKAP1L-201ENST00000293373 DPP8Q6V1X1 898 aaPredicted RBP9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 KRT24Q2M2I5 525 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 TCP11L1Q9NUJ3 509 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 GJB2P29033 226 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 EIF6P56537 245 aaKnown RBP9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 TNNI3KQ59H18 835 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 FPGT-TNNI3KV9GXZ4 949 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 PTCH1Q13635 1447 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 TULP4Q9NRJ4 1543 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 ZFYVE27Q5T4F4 411 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 IQSEC3Q9UPP2 1182 aaPredicted RBP9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 CLTCL1P53675 1640 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 RNF214Q8ND24 703 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 FAM89AQ96GI7 184 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 ZBTB43O43298 467 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 TSHZ3Q63HK5 1081 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 BRINP3Q76B58 766 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 MAGEB6Q8N7X4 407 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 TBC1D22AQ8WUA7 517 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 NCAPD2Q15021 1401 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 ERBB3P21860 1342 aa9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 HSP90AA2PQ14568 343 aaPredicted RBP9.08□□□□□ -0.96
NCKAP1L-201ENST00000293373 MCM9Q9NXL9 1143 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 KLF18A0A0U1RQI7 1052 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 WDR66Q8TBY9 1149 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 ORC3Q9UBD5 711 aaPredicted RBP9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 STX8Q9UNK0 236 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 DIP2CQ9Y2E4 1556 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 BRPF1P55201 1214 aaPredicted RBP9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 RTN1Q16799 776 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 NLGN1Q8N2Q7 840 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 DEF6Q9H4E7 631 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 ZSCAN16Q9H4T2 348 aaPredicted RBP9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 RBM28Q9NW13 759 aaKnown RBP9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 LPIN2Q92539 896 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 RIMBP2O15034 1052 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 FERMT3Q86UX7 667 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 SLC26A6Q9BXS9 759 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 TCIRG1Q13488 830 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 TMC4Q7Z404 712 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 BRF1Q92994 677 aa9.07□□□□□ -0.96
NCKAP1L-201ENST00000293373 RRP36Q96EU6 259 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms