RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ZFP91Q96JP5 570 aaPredicted RBP5.56□□□□□ -1.52
UBR1-201ENST00000290650 NPHP3Q7Z494 1330 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 PRC1O43663 620 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 IGSF3O75054 1194 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 TNNT3P45378 269 aaPredicted RBP5.56□□□□□ -1.52
UBR1-201ENST00000290650 ADCK5Q3MIX3 580 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 MFSD6Q6ZSS7 791 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 TSC1Q92574 1164 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 CCDC47Q96A33 483 aaKnown RBP5.56□□□□□ -1.52
UBR1-201ENST00000290650 SCAND2PQ9GZW5 306 aaPredicted RBP5.56□□□□□ -1.52
UBR1-201ENST00000290650 STX8Q9UNK0 236 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 UNC13BO14795 1591 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 ABCC3O15438 1527 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 CCDC171Q6TFL3 1326 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 B4E1Z4 1266 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 TNNI3KQ59H18 835 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 JMYQ8N9B5 988 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 ALG1Q9BT22 464 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 FPGT-TNNI3KV9GXZ4 949 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 PRDM1O75626 825 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 PICALMQ13492 652 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 AOPEPQ8N6M6 819 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 PHKBQ93100 1093 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 SLC52A2Q9HAB3 445 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 DDX21Q9NR30 783 aaKnown RBP eCLIP5.56□□□□□ -1.52
UBR1-201ENST00000290650 EFCAB6Q5THR3 1501 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 ECM2O94769 699 aaPredicted RBP5.56□□□□□ -1.52
UBR1-201ENST00000290650 IARSP41252 1262 aaKnown RBP5.56□□□□□ -1.52
UBR1-201ENST00000290650 LRRC24Q50LG9 513 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 PPFIBP1Q86W92 1011 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 NCOA7Q8NI08 942 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 TMEM63CQ9P1W3 806 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 PPRC1Q5VV67 1664 aaKnown RBP5.55□□□□□ -1.52
UBR1-201ENST00000290650 CDKL5O76039 1030 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 PTGS1P23219 599 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 TXLNAP40222 546 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 NLRP5P59047 1200 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 CTDSPL2Q05D32 466 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 PTPN21Q16825 1174 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 DNAJC10Q8IXB1 793 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 MAGEC2Q9UBF1 373 aaPredicted RBP5.55□□□□□ -1.52
UBR1-201ENST00000290650 TBX22Q9Y458 520 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 FSD2A1L4K1 749 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 PTPDC1A2A3K4 754 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 TSPY2A6NKD2 308 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 ERCC3P19447 782 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 LMOD1P29536 600 aaPredicted RBP5.55□□□□□ -1.52
UBR1-201ENST00000290650 CCDC186Q7Z3E2 898 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 NBPF5PQ86XG9 351 aaPredicted RBP5.55□□□□□ -1.52
UBR1-201ENST00000290650 EAF2Q96CJ1 260 aaPredicted RBP5.55□□□□□ -1.52
UBR1-201ENST00000290650 RNF216Q9NWF9 866 aaPredicted RBP5.55□□□□□ -1.52
UBR1-201ENST00000290650 RIMBP2O15034 1052 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 OFD1O75665 1012 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 TNNT1P13805 278 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 ITGA6P23229 1130 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 MCM5P33992 734 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 ME3Q16798 604 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 ARMT1Q9H993 441 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 CLTCQ00610 1675 aaKnown RBP5.55□□□□□ -1.52
UBR1-201ENST00000290650 GIGYF1O75420 1035 aaPredicted RBP5.55□□□□□ -1.52
UBR1-201ENST00000290650 RASEFQ8IZ41 740 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 SAP30BPQ9UHR5 308 aaKnown RBP5.55□□□□□ -1.52
UBR1-201ENST00000290650 STX17P56962 302 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 FILIP1LQ4L180 1135 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 METTL22Q9BUU2 404 aaPredicted RBP5.55□□□□□ -1.52
UBR1-201ENST00000290650 PUS3Q9BZE2 481 aaKnown RBP5.55□□□□□ -1.52
UBR1-201ENST00000290650 TFCP2L1Q9NZI6 479 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 SGSM2O43147 1006 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 ALDH1L1O75891 902 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 IBSPP21815 317 aaPredicted RBP5.55□□□□□ -1.52
UBR1-201ENST00000290650 GPT2Q8TD30 523 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 TRERF1Q96PN7 1200 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 ZNF652Q9Y2D9 606 aa5.55□□□□□ -1.52
UBR1-201ENST00000290650 NEURL1BA8MQ27 555 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 GCKRQ14397 625 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 ZFYVE27Q5T4F4 411 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 SOGA3Q5TF21 947 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 RPGRQ92834 1020 aaKnown RBP5.54□□□□□ -1.52
UBR1-201ENST00000290650 ZNF622Q969S3 477 aaKnown RBP eCLIP5.54□□□□□ -1.521e-6■■■□□ 16.9
UBR1-201ENST00000290650 XAGE2Q96GT9 111 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 CEP89Q96ST8 783 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 UBA5Q9GZZ9 404 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 LMBRD1Q9NUN5 540 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 NSFL1CQ9UNZ2 370 aaKnown RBP5.54□□□□□ -1.52
UBR1-201ENST00000290650 ERBB4Q15303 1308 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 URI1O94763 535 aaPredicted RBP5.54□□□□□ -1.52
UBR1-201ENST00000290650 DDB1Q16531 1140 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 CCDC96Q2M329 555 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 DCAF5Q96JK2 942 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 PUS7Q96PZ0 661 aaKnown RBP5.54□□□□□ -1.52
UBR1-201ENST00000290650 CFAP74Q9C0B2 1584 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 CAMSAP1Q5T5Y3 1602 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 ZBTB43O43298 467 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 RFC4P35249 363 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 ZAP70P43403 619 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 TYRO3Q06418 890 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 PI16Q6UXB8 463 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 SEPT11Q9NVA2 429 aaKnown RBP5.54□□□□□ -1.52
UBR1-201ENST00000290650 ADORA1P30542 326 aa5.54□□□□□ -1.52
UBR1-201ENST00000290650 EIF6P56537 245 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms