RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 GRPEL1Q9HAV7 217 aa23.06■■□□□ 1.28
BRAF-201ENST00000288602 RBM27Q9P2N5 1060 aaKnown RBP23.06■■□□□ 1.28
BRAF-201ENST00000288602 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.06■■□□□ 1.28
BRAF-201ENST00000288602 IL6STP40189 918 aaPredicted RBP23.06■■□□□ 1.28
BRAF-201ENST00000288602 HSP90AB3PQ58FF7 597 aa23.06■■□□□ 1.28
BRAF-201ENST00000288602 PRKCSHP14314 528 aaPredicted RBP23.05■■□□□ 1.28
BRAF-201ENST00000288602 LDHAL6AQ6ZMR3 332 aa23.05■■□□□ 1.28
BRAF-201ENST00000288602 NUP98P52948 1817 aa23.05■■□□□ 1.28
BRAF-201ENST00000288602 SYT1P21579 422 aa23.05■■□□□ 1.28
BRAF-201ENST00000288602 CTSWP56202 376 aa23.05■■□□□ 1.28
BRAF-201ENST00000288602 SCARF1Q14162 830 aa23.05■■□□□ 1.28
BRAF-201ENST00000288602 USPL1Q5W0Q7 1092 aa23.05■■□□□ 1.28
BRAF-201ENST00000288602 CDCA7Q9BWT1 371 aaPredicted RBP23.05■■□□□ 1.28
BRAF-201ENST00000288602 WDR33Q9C0J8 1336 aaKnown RBP23.05■■□□□ 1.28
BRAF-201ENST00000288602 NRAPQ86VF7 1730 aa23.04■■□□□ 1.28
BRAF-201ENST00000288602 KCNQ2O43526 872 aa23.04■■□□□ 1.28
BRAF-201ENST00000288602 RPS6KB1P23443 525 aa23.04■■□□□ 1.28
BRAF-201ENST00000288602 GJB2P29033 226 aa23.04■■□□□ 1.28
BRAF-201ENST00000288602 TTC39AQ5SRH9 613 aa23.04■■□□□ 1.28
BRAF-201ENST00000288602 INTS5Q6P9B9 1019 aaKnown RBP23.04■■□□□ 1.28
BRAF-201ENST00000288602 THRAP3Q9Y2W1 955 aaKnown RBP23.04■■□□□ 1.28
BRAF-201ENST00000288602 SPATA31A5Q5VU36 1347 aa23.04■■□□□ 1.28
BRAF-201ENST00000288602 SPATA31A7Q8IWB4 1347 aa23.04■■□□□ 1.28
BRAF-201ENST00000288602 CDHR2Q9BYE9 1310 aa23.04■■□□□ 1.28
BRAF-201ENST00000288602 CYP21A2P08686 494 aa23.04■■□□□ 1.28
BRAF-201ENST00000288602 PI16Q6UXB8 463 aa23.04■■□□□ 1.28
BRAF-201ENST00000288602 PALLDQ8WX93 1383 aa23.03■■□□□ 1.28
BRAF-201ENST00000288602 CRKLP46109 303 aaKnown RBP23.03■■□□□ 1.28
BRAF-201ENST00000288602 MRE11P49959 708 aa23.03■■□□□ 1.28
BRAF-201ENST00000288602 METTL24Q5JXM2 366 aa23.03■■□□□ 1.28
BRAF-201ENST00000288602 CCDC158Q5M9N0 1113 aa23.03■■□□□ 1.28
BRAF-201ENST00000288602 RFX7Q2KHR2 1363 aa23.03■■□□□ 1.28
BRAF-201ENST00000288602 A0A0G2JLW4 131 aa23.03■■□□□ 1.28
BRAF-201ENST00000288602 ITPK1Q13572 414 aa23.03■■□□□ 1.28
BRAF-201ENST00000288602 HMG20BQ9P0W2 317 aa23.03■■□□□ 1.28
BRAF-201ENST00000288602 LOC102724428A0A0B4J2F2 783 aa23.02■■□□□ 1.28
BRAF-201ENST00000288602 STX6O43752 255 aa23.02■■□□□ 1.28
BRAF-201ENST00000288602 SIK1P57059 783 aa23.02■■□□□ 1.28
BRAF-201ENST00000288602 TOB2Q14106 344 aaPredicted RBP23.02■■□□□ 1.28
BRAF-201ENST00000288602 ZSCAN31Q96LW9 406 aaPredicted RBP23.02■■□□□ 1.28
BRAF-201ENST00000288602 CNNM1Q9NRU3 951 aa23.02■■□□□ 1.28
BRAF-201ENST00000288602 AKAP2Q9Y2D5 859 aa23.02■■□□□ 1.28
BRAF-201ENST00000288602 RIPOR2Q9Y4F9 1068 aa23.02■■□□□ 1.28
BRAF-201ENST00000288602 SH3TC1Q8TE82 1336 aa23.02■■□□□ 1.28
BRAF-201ENST00000288602 EIF5P55010 431 aaKnown RBP23.02■■□□□ 1.28
BRAF-201ENST00000288602 STK3Q13188 491 aa23.02■■□□□ 1.28
BRAF-201ENST00000288602 SH2B1Q9NRF2 756 aaPredicted RBP23.02■■□□□ 1.28
BRAF-201ENST00000288602 TCHHQ07283 1943 aa23.01■■□□□ 1.27
BRAF-201ENST00000288602 ANKRD18BA2A2Z9 1011 aa23.01■■□□□ 1.27
BRAF-201ENST00000288602 TPRNQ4KMQ1 711 aa23.01■■□□□ 1.27
BRAF-201ENST00000288602 CCDC87Q9NVE4 849 aa23.01■■□□□ 1.27
BRAF-201ENST00000288602 ERVV-1B6SEH8 477 aa23.01■■□□□ 1.27
BRAF-201ENST00000288602 ZSCAN23Q3MJ62 389 aa23.01■■□□□ 1.27
BRAF-201ENST00000288602 TSGA10IPQ3SY00 556 aa23.01■■□□□ 1.27
BRAF-201ENST00000288602 ZMYM1Q5SVZ6 1142 aa23.01■■□□□ 1.27
BRAF-201ENST00000288602 ZNF34Q8IZ26 560 aa23.01■■□□□ 1.27
BRAF-201ENST00000288602 U3KPZ7 1027 aaPredicted RBP23.01■■□□□ 1.27
BRAF-201ENST00000288602 ANKRD36CQ5JPF3 1778 aa23■■□□□ 1.27
BRAF-201ENST00000288602 HCLS1P14317 486 aaPredicted RBP23■■□□□ 1.27
BRAF-201ENST00000288602 NEK1Q96PY6 1258 aa23■■□□□ 1.27
BRAF-201ENST00000288602 LRRC2Q9BYS8 371 aa23■■□□□ 1.27
BRAF-201ENST00000288602 RIC1Q4ADV7 1423 aa23■■□□□ 1.27
BRAF-201ENST00000288602 SLIT2O94813 1529 aa23■■□□□ 1.27
BRAF-201ENST00000288602 M0R2C6 588 aa23■■□□□ 1.27
BRAF-201ENST00000288602 RNF113AO15541 343 aaKnown RBP23■■□□□ 1.27
BRAF-201ENST00000288602 ZSCAN22P10073 491 aaPredicted RBP23■■□□□ 1.27
BRAF-201ENST00000288602 ZAP70P43403 619 aa23■■□□□ 1.27
BRAF-201ENST00000288602 FAM98CQ17RN3 349 aaKnown RBP23■■□□□ 1.27
BRAF-201ENST00000288602 SUSD4Q5VX71 490 aa23■■□□□ 1.27
BRAF-201ENST00000288602 HELLSQ9NRZ9 838 aa23■■□□□ 1.27
BRAF-201ENST00000288602 FBXO3Q9UK99 471 aa23■■□□□ 1.27
BRAF-201ENST00000288602 PDE8AO60658 829 aa22.99■■□□□ 1.27
BRAF-201ENST00000288602 KCNQ4P56696 695 aa22.99■■□□□ 1.27
BRAF-201ENST00000288602 ATP2B3Q16720 1220 aa22.99■■□□□ 1.27
BRAF-201ENST00000288602 MAST3O60307 1309 aa22.99■■□□□ 1.27
BRAF-201ENST00000288602 STOX1Q6ZVD7 989 aa22.99■■□□□ 1.27
BRAF-201ENST00000288602 GADD45BO75293 160 aaPredicted RBP22.98■■□□□ 1.27
BRAF-201ENST00000288602 HELBQ8NG08 1087 aaPredicted RBP22.98■■□□□ 1.27
BRAF-201ENST00000288602 OSBP2Q969R2 916 aa22.98■■□□□ 1.27
BRAF-201ENST00000288602 TMEM63CQ9P1W3 806 aa22.98■■□□□ 1.27
BRAF-201ENST00000288602 HSPD1P10809 573 aaKnown RBP22.98■■□□□ 1.27
BRAF-201ENST00000288602 CNPY2Q9Y2B0 182 aa22.98■■□□□ 1.27
BRAF-201ENST00000288602 MYH3P11055 1940 aa22.97■■□□□ 1.27
BRAF-201ENST00000288602 TOM1O60784 492 aa22.97■■□□□ 1.27
BRAF-201ENST00000288602 USP48Q86UV5 1035 aa22.97■■□□□ 1.27
BRAF-201ENST00000288602 C8orf37Q96NL8 207 aa22.97■■□□□ 1.27
BRAF-201ENST00000288602 Q6ZUG5 572 aa22.97■■□□□ 1.27
BRAF-201ENST00000288602 MYH14Q7Z406 1995 aaKnown RBP22.96■■□□□ 1.27
BRAF-201ENST00000288602 KRT32Q14532 448 aa22.96■■□□□ 1.27
BRAF-201ENST00000288602 WASHC4Q2M389 1173 aa22.96■■□□□ 1.27
BRAF-201ENST00000288602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.96■■□□□ 1.274e-6■■□□□ 13.5
BRAF-201ENST00000288602 VPS37CA5D8V6 355 aaPredicted RBP22.96■■□□□ 1.27
BRAF-201ENST00000288602 F13A1P00488 732 aa22.96■■□□□ 1.27
BRAF-201ENST00000288602 ANKRD1Q15327 319 aa22.96■■□□□ 1.27
BRAF-201ENST00000288602 TTLL5Q6EMB2 1281 aa22.96■■□□□ 1.27
BRAF-201ENST00000288602 SNAP23O00161 211 aa22.95■■□□□ 1.26
BRAF-201ENST00000288602 MCAMP43121 646 aa22.95■■□□□ 1.26
BRAF-201ENST00000288602 BARGINQ6ZT62 677 aa22.95■■□□□ 1.26
BRAF-201ENST00000288602 VGLL2Q8N8G2 317 aa22.94■■□□□ 1.26
BRAF-201ENST00000288602 ISY1Q9ULR0 285 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms