RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 RPAP1Q9BWH6 1393 aaPredicted RBP12.26□□□□□ -0.45
C9orf43-201ENST00000288462 ADORA1P30542 326 aa12.26□□□□□ -0.45
C9orf43-201ENST00000288462 CUL4AQ13619 759 aa12.26□□□□□ -0.45
C9orf43-201ENST00000288462 LDHAL6AQ6ZMR3 332 aa12.26□□□□□ -0.45
C9orf43-201ENST00000288462 ZNF589Q86UQ0 364 aaPredicted RBP12.26□□□□□ -0.45
C9orf43-201ENST00000288462 XAGE2Q96GT9 111 aa12.26□□□□□ -0.45
C9orf43-201ENST00000288462 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
C9orf43-201ENST00000288462 NIP7Q9Y221 180 aaKnown RBP eCLIP12.26□□□□□ -0.45
C9orf43-201ENST00000288462 BRWD3Q6RI45 1802 aa12.26□□□□□ -0.45
C9orf43-201ENST00000288462 IFIT1P09914 478 aaKnown RBP12.25□□□□□ -0.45
C9orf43-201ENST00000288462 HSP90B1P14625 803 aaKnown RBP12.25□□□□□ -0.45
C9orf43-201ENST00000288462 ATP2B3Q16720 1220 aa12.25□□□□□ -0.45
C9orf43-201ENST00000288462 METTL24Q5JXM2 366 aa12.25□□□□□ -0.45
C9orf43-201ENST00000288462 TM6SF1Q9BZW5 370 aa12.25□□□□□ -0.45
C9orf43-201ENST00000288462 CWC22Q9HCG8 908 aaKnown RBP12.25□□□□□ -0.45
C9orf43-201ENST00000288462 COL4A1P02462 1669 aa12.25□□□□□ -0.45
C9orf43-201ENST00000288462 GOLIM4O00461 696 aa12.25□□□□□ -0.45
C9orf43-201ENST00000288462 TAF5LO75529 589 aa12.25□□□□□ -0.45
C9orf43-201ENST00000288462 PRPF40BQ6NWY9 871 aaKnown RBP12.25□□□□□ -0.45
C9orf43-201ENST00000288462 AEBP2Q6ZN18 517 aaPredicted RBP12.25□□□□□ -0.45
C9orf43-201ENST00000288462 CNNM1Q9NRU3 951 aa12.25□□□□□ -0.45
C9orf43-201ENST00000288462 HCLS1P14317 486 aaPredicted RBP12.24□□□□□ -0.45
C9orf43-201ENST00000288462 MCM4P33991 863 aa12.24□□□□□ -0.45
C9orf43-201ENST00000288462 CCDC158Q5M9N0 1113 aa12.24□□□□□ -0.45
C9orf43-201ENST00000288462 USPL1Q5W0Q7 1092 aa12.24□□□□□ -0.45
C9orf43-201ENST00000288462 CREB3L3Q68CJ9 461 aa12.24□□□□□ -0.45
C9orf43-201ENST00000288462 DOCK2Q92608 1830 aa12.24□□□□□ -0.45
C9orf43-201ENST00000288462 TNPO1Q92973 898 aaKnown RBP12.24□□□□□ -0.45
C9orf43-201ENST00000288462 MROH5Q6ZUA9 1318 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 RPS6KA4O75676 772 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 CYP2E1P05181 493 aaPredicted RBP12.23□□□□□ -0.45
C9orf43-201ENST00000288462 KCNQ4P56696 695 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 MCMDC2Q4G0Z9 681 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 TTC39AQ5SRH9 613 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 FAM182BQ5T319 152 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 ZNF512BQ96KM6 892 aaPredicted RBP12.23□□□□□ -0.45
C9orf43-201ENST00000288462 SLC27A2O14975 620 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 PDE8BO95263 885 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 CCDC152Q4G0S7 254 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 ZMYM1Q5SVZ6 1142 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 CLEC17AQ6ZS10 378 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 SEPT12Q8IYM1 358 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 ZGPATQ8N5A5 531 aaKnown RBP12.23□□□□□ -0.45
C9orf43-201ENST00000288462 INTS4Q96HW7 963 aaKnown RBP12.23□□□□□ -0.45
C9orf43-201ENST00000288462 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 HELLSQ9NRZ9 838 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 HMG20BQ9P0W2 317 aa12.23□□□□□ -0.45
C9orf43-201ENST00000288462 CCNL1Q9UK58 526 aaPredicted RBP12.23□□□□□ -0.45
C9orf43-201ENST00000288462 UBR3Q6ZT12 1888 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 LAMA4Q16363 1823 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 CHGBP05060 677 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 ZKSCAN1P17029 563 aaPredicted RBP12.22□□□□□ -0.45
C9orf43-201ENST00000288462 TSGA10IPQ3SY00 556 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 GORABQ5T7V8 394 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 JAKMIP1Q96N16 626 aaKnown RBP12.22□□□□□ -0.45
C9orf43-201ENST00000288462 BCL2L12Q9HB09 334 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 NARFQ9UHQ1 456 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 FAM177BA6PVY3 158 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 CASTP20810 708 aaKnown RBP12.22□□□□□ -0.45
C9orf43-201ENST00000288462 FGFR2P21802 821 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 KCNJ4P48050 445 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 NUCB2P80303 420 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 SCARF1Q14162 830 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 ADCK5Q3MIX3 580 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 RNF20Q5VTR2 975 aa12.22□□□□□ -0.45
C9orf43-201ENST00000288462 SEC62Q99442 399 aaKnown RBP12.22□□□□□ -0.45
C9orf43-201ENST00000288462 MYO5AQ9Y4I1 1855 aaKnown RBP12.22□□□□□ -0.45
C9orf43-201ENST00000288462 DDX11L8A8MPP1 907 aa12.21□□□□□ -0.45
C9orf43-201ENST00000288462 RNF113AO15541 343 aaKnown RBP12.21□□□□□ -0.45
C9orf43-201ENST00000288462 SSFA2P28290 1259 aa12.21□□□□□ -0.45
C9orf43-201ENST00000288462 AK2P54819 239 aa12.21□□□□□ -0.45
C9orf43-201ENST00000288462 PUM3Q15397 648 aaKnown RBP12.21□□□□□ -0.45
C9orf43-201ENST00000288462 VPS53Q5VIR6 699 aa12.21□□□□□ -0.45
C9orf43-201ENST00000288462 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
C9orf43-201ENST00000288462 MAST3O60307 1309 aa12.21□□□□□ -0.46
C9orf43-201ENST00000288462 GNPATO15228 680 aa12.2□□□□□ -0.46
C9orf43-201ENST00000288462 CCDC129Q6ZRS4 1044 aa12.2□□□□□ -0.46
C9orf43-201ENST00000288462 RUFY3Q7L099 469 aa12.2□□□□□ -0.46
C9orf43-201ENST00000288462 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
C9orf43-201ENST00000288462 SEC31BQ9NQW1 1179 aa12.2□□□□□ -0.46
C9orf43-201ENST00000288462 CYP46A1Q9Y6A2 500 aa12.2□□□□□ -0.46
C9orf43-201ENST00000288462 ARID4AP29374 1257 aaPredicted RBP12.2□□□□□ -0.46
C9orf43-201ENST00000288462 LRRFIP1Q32MZ4 808 aaKnown RBP12.2□□□□□ -0.46
C9orf43-201ENST00000288462 LPIN2Q92539 896 aa12.2□□□□□ -0.46
C9orf43-201ENST00000288462 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
C9orf43-201ENST00000288462 TAF1P21675 1872 aa12.2□□□□□ -0.46
C9orf43-201ENST00000288462 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
C9orf43-201ENST00000288462 ZFYP08048 801 aaPredicted RBP12.19□□□□□ -0.46
C9orf43-201ENST00000288462 PSMA5P28066 241 aa12.19□□□□□ -0.46
C9orf43-201ENST00000288462 DEKP35659 375 aaKnown RBP12.19□□□□□ -0.46
C9orf43-201ENST00000288462 MCAMP43121 646 aa12.19□□□□□ -0.46
C9orf43-201ENST00000288462 ZAP70P43403 619 aa12.19□□□□□ -0.46
C9orf43-201ENST00000288462 FKBP4Q02790 459 aaKnown RBP eCLIP12.19□□□□□ -0.46
C9orf43-201ENST00000288462 SF3B3Q15393 1217 aaKnown RBP12.19□□□□□ -0.46
C9orf43-201ENST00000288462 ERFEQ4G0M1 354 aa12.19□□□□□ -0.46
C9orf43-201ENST00000288462 SLC10A5Q5PT55 438 aa12.19□□□□□ -0.46
C9orf43-201ENST00000288462 TBC1D9BQ66K14 1250 aa12.19□□□□□ -0.46
C9orf43-201ENST00000288462 NOL8Q76FK4 1167 aaKnown RBP12.19□□□□□ -0.46
C9orf43-201ENST00000288462 DSCC1Q9BVC3 393 aa12.19□□□□□ -0.46
C9orf43-201ENST00000288462 LIMCH1Q9UPQ0 1083 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms