RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 PHACTR3Q96KR7 559 aa22.2■■□□□ 1.14
LSM11-201ENST00000286307 CFAP100Q494V2 611 aa22.2■■□□□ 1.14
LSM11-201ENST00000286307 SPDYE3A6NKU9 549 aa22.2■■□□□ 1.14
LSM11-201ENST00000286307 H7C1D1 291 aa22.2■■□□□ 1.14
LSM11-201ENST00000286307 FAM182BQ5T319 152 aa22.2■■□□□ 1.14
LSM11-201ENST00000286307 ERMNQ8TAM6 284 aa22.2■■□□□ 1.14
LSM11-201ENST00000286307 LGR6Q9HBX8 967 aa22.2■■□□□ 1.14
LSM11-201ENST00000286307 PDE6BP35913 854 aa22.2■■□□□ 1.14
LSM11-201ENST00000286307 ABCA5Q8WWZ7 1642 aa22.19■■□□□ 1.14
LSM11-201ENST00000286307 PLBD2Q8NHP8 589 aa22.19■■□□□ 1.14
LSM11-201ENST00000286307 MAST1Q9Y2H9 1570 aa22.19■■□□□ 1.14
LSM11-201ENST00000286307 COL17A1Q9UMD9 1497 aaPredicted RBP22.19■■□□□ 1.14
LSM11-201ENST00000286307 CFAP74Q9C0B2 1584 aa22.19■■□□□ 1.14
LSM11-201ENST00000286307 SBNO1A3KN83 1393 aa22.19■■□□□ 1.14
LSM11-201ENST00000286307 PDE8AO60658 829 aa22.19■■□□□ 1.14
LSM11-201ENST00000286307 PDIA4P13667 645 aaKnown RBP22.19■■□□□ 1.14
LSM11-201ENST00000286307 CETN2P41208 172 aa22.19■■□□□ 1.14
LSM11-201ENST00000286307 NOD1Q9Y239 953 aa22.19■■□□□ 1.14
LSM11-201ENST00000286307 ANAPC15P60006 121 aa22.18■■□□□ 1.14
LSM11-201ENST00000286307 JAKMIP3Q5VZ66 844 aa22.18■■□□□ 1.14
LSM11-201ENST00000286307 NCBP1Q09161 790 aaKnown RBP22.18■■□□□ 1.14
LSM11-201ENST00000286307 CETN1Q12798 172 aa22.18■■□□□ 1.14
LSM11-201ENST00000286307 RRP36Q96EU6 259 aaKnown RBP22.18■■□□□ 1.14
LSM11-201ENST00000286307 HMG20BQ9P0W2 317 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 IVNS1ABPQ9Y6Y0 642 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 GNAT2P19087 354 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 GNAQP50148 359 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 TEX35Q5T0J7 233 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 TTC6Q86TZ1 520 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 SKAP1Q86WV1 359 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 FLAD1Q8NFF5 587 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 TAF4BQ92750 862 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 NEO1Q92859 1461 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 ZFYVE9O95405 1425 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 ATP8B2P98198 1209 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 C2CD5Q86YS7 1000 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 YEATS2Q9ULM3 1422 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 TCP10Q12799 353 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 CCDC40Q4G0X9 1142 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 TMTC2Q8N394 836 aa22.17■■□□□ 1.14
LSM11-201ENST00000286307 EPB41L2O43491 1005 aaKnown RBP22.16■■□□□ 1.14
LSM11-201ENST00000286307 SH2D4AQ9H788 454 aa22.16■■□□□ 1.14
LSM11-201ENST00000286307 DDX21Q9NR30 783 aaKnown RBP eCLIP22.16■■□□□ 1.14
LSM11-201ENST00000286307 DISP1Q96F81 1524 aa22.16■■□□□ 1.14
LSM11-201ENST00000286307 TAF5LO75529 589 aa22.16■■□□□ 1.14
LSM11-201ENST00000286307 GJB2P29033 226 aa22.16■■□□□ 1.14
LSM11-201ENST00000286307 MAP3K11Q16584 847 aa22.16■■□□□ 1.14
LSM11-201ENST00000286307 CCDC174Q6PII3 467 aa22.16■■□□□ 1.14
LSM11-201ENST00000286307 CCDC148Q8NFR7 591 aa22.16■■□□□ 1.14
LSM11-201ENST00000286307 ERCC4Q92889 916 aaPredicted RBP22.15■■□□□ 1.14
LSM11-201ENST00000286307 TSPYL6Q8N831 410 aa22.15■■□□□ 1.14
LSM11-201ENST00000286307 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.15■■□□□ 1.14
LSM11-201ENST00000286307 NBPF7P0C2Y1 421 aaPredicted RBP22.15■■□□□ 1.14
LSM11-201ENST00000286307 FAM212AQ96EL1 285 aa22.15■■□□□ 1.14
LSM11-201ENST00000286307 TCHPQ9BT92 498 aa22.15■■□□□ 1.14
LSM11-201ENST00000286307 C6orf50Q9HD87 102 aa22.15■■□□□ 1.14
LSM11-201ENST00000286307 TTC22Q5TAA0 569 aa22.15■■□□□ 1.14
LSM11-201ENST00000286307 PRKCSHP14314 528 aaPredicted RBP22.14■■□□□ 1.14
LSM11-201ENST00000286307 MRE11P49959 708 aa22.14■■□□□ 1.14
LSM11-201ENST00000286307 PKD2L1Q9P0L9 805 aa22.14■■□□□ 1.14
LSM11-201ENST00000286307 PRC1O43663 620 aa22.14■■□□□ 1.14
LSM11-201ENST00000286307 TNNT1P13805 278 aa22.14■■□□□ 1.14
LSM11-201ENST00000286307 NPHP4O75161 1426 aaPredicted RBP22.14■■□□□ 1.13
LSM11-201ENST00000286307 KRT27Q7Z3Y8 459 aa22.14■■□□□ 1.13
LSM11-201ENST00000286307 RNF113AO15541 343 aaKnown RBP22.14■■□□□ 1.13
LSM11-201ENST00000286307 FILIP1Q7Z7B0 1213 aa22.14■■□□□ 1.13
LSM11-201ENST00000286307 BRF1Q92994 677 aa22.14■■□□□ 1.13
LSM11-201ENST00000286307 EDC4Q6P2E9 1401 aaKnown RBP22.14■■□□□ 1.13
LSM11-201ENST00000286307 BACH2Q9BYV9 841 aa22.14■■□□□ 1.13
LSM11-201ENST00000286307 MTIF2P46199 727 aaKnown RBP22.13■■□□□ 1.13
LSM11-201ENST00000286307 VPS36Q86VN1 386 aa22.13■■□□□ 1.13
LSM11-201ENST00000286307 ZNF594Q96JF6 807 aaPredicted RBP22.13■■□□□ 1.13
LSM11-201ENST00000286307 GPHNQ9NQX3 736 aaPredicted RBP22.13■■□□□ 1.13
LSM11-201ENST00000286307 BACH1O14867 736 aa22.13■■□□□ 1.13
LSM11-201ENST00000286307 MAST3O60307 1309 aa22.13■■□□□ 1.13
LSM11-201ENST00000286307 MACROD2A1Z1Q3 448 aa22.13■■□□□ 1.13
LSM11-201ENST00000286307 PHACTR2O75167 634 aa22.13■■□□□ 1.13
LSM11-201ENST00000286307 SPA17Q15506 151 aa22.13■■□□□ 1.13
LSM11-201ENST00000286307 ARHGEF10LQ9HCE6 1279 aa22.13■■□□□ 1.13
LSM11-201ENST00000286307 TBC1D9Q6ZT07 1266 aa22.12■■□□□ 1.13
LSM11-201ENST00000286307 PUM3Q15397 648 aaKnown RBP22.12■■□□□ 1.13
LSM11-201ENST00000286307 CARD14Q9BXL6 1004 aa22.12■■□□□ 1.13
LSM11-201ENST00000286307 GPCPD1Q9NPB8 672 aa22.12■■□□□ 1.13
LSM11-201ENST00000286307 ARHGAP45Q92619 1136 aa22.12■■□□□ 1.13
LSM11-201ENST00000286307 SHANK2Q9UPX8 1470 aa22.12■■□□□ 1.13
LSM11-201ENST00000286307 DLGAP5Q15398 846 aa22.12■■□□□ 1.13
LSM11-201ENST00000286307 FSIP1Q8NA03 581 aa22.12■■□□□ 1.13
LSM11-201ENST00000286307 HOOK2Q96ED9 719 aa22.12■■□□□ 1.13
LSM11-201ENST00000286307 TCEANC2Q96MN5 208 aa22.12■■□□□ 1.13
LSM11-201ENST00000286307 TFIP11Q9UBB9 837 aaKnown RBP22.12■■□□□ 1.13
LSM11-201ENST00000286307 ATF5Q9Y2D1 282 aaPredicted RBP22.12■■□□□ 1.13
LSM11-201ENST00000286307 NMIQ13287 307 aaPredicted RBP22.11■■□□□ 1.13
LSM11-201ENST00000286307 ALG1Q9BT22 464 aa22.11■■□□□ 1.13
LSM11-201ENST00000286307 METTL22Q9BUU2 404 aaPredicted RBP22.11■■□□□ 1.13
LSM11-201ENST00000286307 FAM196AQ6ZSG2 479 aa22.11■■□□□ 1.13
LSM11-201ENST00000286307 CHST3Q7LGC8 479 aa22.11■■□□□ 1.13
LSM11-201ENST00000286307 SCAND2PQ9GZW5 306 aaPredicted RBP22.11■■□□□ 1.13
LSM11-201ENST00000286307 RSPH6AQ9H0K4 717 aa22.11■■□□□ 1.13
LSM11-201ENST00000286307 ZNF335Q9H4Z2 1342 aaPredicted RBP22.11■■□□□ 1.13
LSM11-201ENST00000286307 MBD4O95243 580 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms