RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 RBM28Q9NW13 759 aaKnown RBP9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 NKIRAS1Q9NYS0 192 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 PUF60Q9UHX1 559 aaKnown RBP9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 C9orf84Q5VXU9 1444 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 SH3BGRP55822 239 aaPredicted RBP9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 SARNPP82979 210 aaKnown RBP9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 DBF4Q9UBU7 674 aaPredicted RBP9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 EHBP1L1Q8N3D4 1523 aa9.88□□□□□ -0.83
SCUBE3-201ENST00000274938 CCDC184Q52MB2 194 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 SEC62Q99442 399 aaKnown RBP9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 GBP1P32455 592 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 TYRO3Q06418 890 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 CALCOCO2Q13137 446 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 APBB1IPQ7Z5R6 666 aaPredicted RBP9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 CCDC63Q8NA47 563 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 PANK2Q9BZ23 570 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 DNAJC25Q9H1X3 360 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 RTL1A6NKG5 1358 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 CASQ2O14958 399 aaPredicted RBP9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 TRIM27P14373 513 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 ARHGAP25P42331 645 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 CNGA4Q8IV77 575 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 ARHGAP45Q92619 1136 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 CNNM2Q9H8M5 875 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 DACT1Q9NYF0 836 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 MTUS1Q9ULD2 1270 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 CNPY2Q9Y2B0 182 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 TERF1P54274 439 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 TSNAXIP1Q2TAA8 658 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 ZEB2O60315 1214 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 UQCRFS1P1P0C7P4 283 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 PSMC4P43686 418 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 GNAQP50148 359 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 GSTA5Q7RTV2 222 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 THEMISQ8N1K5 641 aaPredicted RBP9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 SYNCQ9H7C4 482 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 SMARCA4P51532 1647 aa9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 CWC25Q9NXE8 425 aaPredicted RBP9.87□□□□□ -0.83
SCUBE3-201ENST00000274938 RRS1Q15050 365 aaKnown RBP9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 CCDC14Q49A88 953 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 NSD2O96028 1365 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 PPP1R2P41236 205 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 NUCB1Q02818 461 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 ATL3Q6DD88 541 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 MICU3Q86XE3 530 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 WDHD1O75717 1129 aaPredicted RBP9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 CEP120Q8N960 986 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 ISM2Q6H9L7 571 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 CCDC26Q8TAB7 109 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 NPHP3Q7Z494 1330 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 GMNNO75496 209 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 ERCC6LQ2NKX8 1250 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 ZNF569Q5MCW4 686 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 FYB2Q5VWT5 728 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 MSANTD4Q8NCY6 345 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 ALG1Q9BT22 464 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 KLF18A0A0U1RQI7 1052 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 BAG3O95817 575 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 CFAP157Q5JU67 520 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 BRF1Q92994 677 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 ATAD2BQ9ULI0 1458 aa9.86□□□□□ -0.83
SCUBE3-201ENST00000274938 INPP5BP32019 993 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 TRIM14Q14142 442 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 NEDD9Q14511 834 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 SYT10Q6XYQ8 523 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 KRBA2Q6ZNG9 492 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 SMC5Q8IY18 1101 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 NEK11Q8NG66 645 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 VCXQ9H320 206 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 PIK3R4Q99570 1358 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 ZBTB43O43298 467 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 CLNS1AP54105 237 aaKnown RBP9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 CCDC85AQ96PX6 553 aaPredicted RBP9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 MPHOSPH6Q99547 160 aaKnown RBP9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 TSPY2A6NKD2 308 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 PCK1P35558 622 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 PPP2R3AQ06190 1150 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 FLIIQ13045 1269 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 WTAPQ15007 396 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 MCM10Q7L590 875 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 RAB3GAP1Q15042 981 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 ARHGAP24Q8N264 748 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 GPR161Q8N6U8 529 aaKnown RBP9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 BICD1Q96G01 975 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 KCNK9Q9NPC2 374 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 SPTLC2O15270 562 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 AFMP43652 599 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 CCDC144CPQ8IYA2 1237 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 TXNDC16Q9P2K2 825 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 SYNJ2O15056 1496 aa9.85□□□□□ -0.83
SCUBE3-201ENST00000274938 ASIC1P78348 528 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 CSRNP2Q9H175 543 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 PRDM11Q9NQV5 511 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 GUCA1BQ9UMX6 200 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 EVCP57679 992 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 IMPG2Q9BZV3 1241 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 MMRN2Q9H8L6 949 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 HDAC9Q9UKV0 1011 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms