RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 GOLGA6L4A6NEF3 574 aa28.48■■■□□ 2.15
SH3GL1-201ENST00000269886 C17orf53Q8N3J3 647 aaPredicted RBP28.48■■■□□ 2.15
SH3GL1-201ENST00000269886 TNS3Q68CZ2 1445 aa28.48■■■□□ 2.15
SH3GL1-201ENST00000269886 CKAP2LQ8IYA6 745 aa28.47■■■□□ 2.15
SH3GL1-201ENST00000269886 A1BGP04217 495 aa28.47■■■□□ 2.15
SH3GL1-201ENST00000269886 PAG1Q9NWQ8 432 aa28.46■■■□□ 2.15
SH3GL1-201ENST00000269886 SCRN1Q12765 414 aa28.46■■■□□ 2.15
SH3GL1-201ENST00000269886 PIBF1Q8WXW3 757 aa28.46■■■□□ 2.15
SH3GL1-201ENST00000269886 ZNF594Q96JF6 807 aaPredicted RBP28.46■■■□□ 2.15
SH3GL1-201ENST00000269886 CWC25Q9NXE8 425 aaPredicted RBP28.46■■■□□ 2.15
SH3GL1-201ENST00000269886 SH3TC1Q8TE82 1336 aa28.45■■■□□ 2.15
SH3GL1-201ENST00000269886 FGD1P98174 961 aa28.45■■■□□ 2.15
SH3GL1-201ENST00000269886 ZBTB3Q9H5J0 574 aa28.45■■■□□ 2.15
SH3GL1-201ENST00000269886 MRVI1Q9Y6F6 885 aa28.45■■■□□ 2.15
SH3GL1-201ENST00000269886 KDM4FA0A1W2PPD8 638 aa28.45■■■□□ 2.14
SH3GL1-201ENST00000269886 HSPA2P54652 639 aa28.45■■■□□ 2.14
SH3GL1-201ENST00000269886 TYRO3Q06418 890 aa28.45■■■□□ 2.14
SH3GL1-201ENST00000269886 LRRC24Q50LG9 513 aa28.45■■■□□ 2.14
SH3GL1-201ENST00000269886 TNMDQ9H2S6 317 aa28.45■■■□□ 2.14
SH3GL1-201ENST00000269886 SASS6Q6UVJ0 657 aa28.44■■■□□ 2.14
SH3GL1-201ENST00000269886 SPATA31A3Q5VYP0 1347 aa28.44■■■□□ 2.14
SH3GL1-201ENST00000269886 A0A0G2JLW4 131 aa28.44■■■□□ 2.14
SH3GL1-201ENST00000269886 RESTQ13127 1097 aa28.44■■■□□ 2.14
SH3GL1-201ENST00000269886 NOLC1Q14978 699 aaKnown RBP eCLIP28.44■■■□□ 2.14
SH3GL1-201ENST00000269886 PGBD1Q96JS3 809 aa28.44■■■□□ 2.14
SH3GL1-201ENST00000269886 DNTTIP2Q5QJE6 756 aaKnown RBP28.43■■■□□ 2.14
SH3GL1-201ENST00000269886 LAMB4A4D0S4 1761 aa28.43■■■□□ 2.14
SH3GL1-201ENST00000269886 H3BQV1 296 aa28.43■■■□□ 2.14
SH3GL1-201ENST00000269886 IFFO2Q5TF58 517 aa28.43■■■□□ 2.14
SH3GL1-201ENST00000269886 FAM200AQ8TCP9 573 aa28.42■■■□□ 2.14
SH3GL1-201ENST00000269886 PALLDQ8WX93 1383 aa28.42■■■□□ 2.14
SH3GL1-201ENST00000269886 LUZP1Q86V48 1076 aa28.42■■■□□ 2.14
SH3GL1-201ENST00000269886 SPC24Q8NBT2 197 aa28.42■■■□□ 2.14
SH3GL1-201ENST00000269886 PLEKHG2Q9H7P9 1386 aa28.42■■■□□ 2.14
SH3GL1-201ENST00000269886 NR1I2O75469 434 aa28.41■■■□□ 2.14
SH3GL1-201ENST00000269886 IL15P40933 162 aaPredicted RBP28.41■■■□□ 2.14
SH3GL1-201ENST00000269886 DHX32Q7L7V1 743 aaKnown RBP28.41■■■□□ 2.14
SH3GL1-201ENST00000269886 HELLSQ9NRZ9 838 aa28.41■■■□□ 2.14
SH3GL1-201ENST00000269886 FAM13BQ9NYF5 915 aa28.41■■■□□ 2.14
SH3GL1-201ENST00000269886 FOSBP53539 338 aa28.4■■■□□ 2.14
SH3GL1-201ENST00000269886 ZCRB1Q8TBF4 217 aaKnown RBP28.4■■■□□ 2.14
SH3GL1-201ENST00000269886 BICD2Q8TD16 824 aa28.4■■■□□ 2.14
SH3GL1-201ENST00000269886 APOBRQ0VD83 1088 aa28.4■■■□□ 2.14
SH3GL1-201ENST00000269886 CADPS2Q86UW7 1296 aa28.4■■■□□ 2.14
SH3GL1-201ENST00000269886 STRCP1A6NGW2 1772 aa28.4■■■□□ 2.14
SH3GL1-201ENST00000269886 ZMYM1Q5SVZ6 1142 aa28.39■■■□□ 2.14
SH3GL1-201ENST00000269886 PUS3Q9BZE2 481 aaKnown RBP28.39■■■□□ 2.14
SH3GL1-201ENST00000269886 DDX19AQ9NUU7 478 aaKnown RBP28.39■■■□□ 2.14
SH3GL1-201ENST00000269886 CPDO75976 1380 aa28.39■■■□□ 2.14
SH3GL1-201ENST00000269886 EYA2O00167 538 aa28.39■■■□□ 2.14
SH3GL1-201ENST00000269886 PFKFB2O60825 505 aa28.39■■■□□ 2.14
SH3GL1-201ENST00000269886 ANO6Q4KMQ2 910 aa28.39■■■□□ 2.14
SH3GL1-201ENST00000269886 SMARCC2Q8TAQ2 1214 aa28.39■■■□□ 2.14
SH3GL1-201ENST00000269886 GPR108Q9NPR9 543 aa28.39■■■□□ 2.14
SH3GL1-201ENST00000269886 CEBPZQ03701 1054 aaKnown RBP28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 TOM1L2Q6ZVM7 507 aa28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 DSCC1Q9BVC3 393 aa28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 CLSTN2Q9H4D0 955 aa28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 A0A1B0GUL7 405 aa28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 HMGB1P09429 215 aaKnown RBP28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 IFIT1P09914 478 aaKnown RBP28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 HSPD1P10809 573 aaKnown RBP28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 NSUN7Q8NE18 718 aaKnown RBP28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 PDCL3Q9H2J4 239 aa28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 KCNF1Q9H3M0 494 aa28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 DCCP43146 1447 aa28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 PCDH11XQ9BZA7 1347 aa28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 PCDH11YQ9BZA8 1340 aa28.38■■■□□ 2.13
SH3GL1-201ENST00000269886 PPFIA3O75145 1194 aa28.37■■■□□ 2.13
SH3GL1-201ENST00000269886 CTDNEP1O95476 244 aa28.37■■■□□ 2.13
SH3GL1-201ENST00000269886 CCT2P78371 535 aaKnown RBP28.37■■■□□ 2.13
SH3GL1-201ENST00000269886 CCDC191Q8NCU4 936 aa28.37■■■□□ 2.13
SH3GL1-201ENST00000269886 CHST3Q7LGC8 479 aa28.36■■■□□ 2.13
SH3GL1-201ENST00000269886 ZSCAN16Q9H4T2 348 aaPredicted RBP28.36■■■□□ 2.13
SH3GL1-201ENST00000269886 CBX8Q9HC52 389 aa28.36■■■□□ 2.13
SH3GL1-201ENST00000269886 LAMA4Q16363 1823 aa28.36■■■□□ 2.13
SH3GL1-201ENST00000269886 MAST3O60307 1309 aa28.36■■■□□ 2.13
SH3GL1-201ENST00000269886 E7EWF7 191 aa28.36■■■□□ 2.13
SH3GL1-201ENST00000269886 EXOSC10Q01780 885 aaKnown RBP28.36■■■□□ 2.13
SH3GL1-201ENST00000269886 RBM43Q6ZSC3 357 aaKnown RBP28.36■■■□□ 2.13
SH3GL1-201ENST00000269886 TJP1Q07157 1748 aa28.36■■■□□ 2.13
SH3GL1-201ENST00000269886 LLPHQ9BRT6 129 aaKnown RBP28.35■■■□□ 2.13
SH3GL1-201ENST00000269886 NCOA5Q9HCD5 579 aaKnown RBP28.35■■■□□ 2.13
SH3GL1-201ENST00000269886 PRDM11Q9NQV5 511 aa28.35■■■□□ 2.13
SH3GL1-201ENST00000269886 NAP1L2Q9ULW6 460 aaPredicted RBP28.35■■■□□ 2.13
SH3GL1-201ENST00000269886 NUP188Q5SRE5 1749 aa28.35■■■□□ 2.13
SH3GL1-201ENST00000269886 PARP4Q9UKK3 1724 aaKnown RBP28.35■■■□□ 2.13
SH3GL1-201ENST00000269886 PTPDC1A2A3K4 754 aa28.34■■■□□ 2.13
SH3GL1-201ENST00000269886 FTOQ9C0B1 505 aaKnown RBP eCLIP28.34■■■□□ 2.13
SH3GL1-201ENST00000269886 PYCARDQ9ULZ3 195 aa28.34■■■□□ 2.13
SH3GL1-201ENST00000269886 WDR17Q8IZU2 1322 aa28.34■■■□□ 2.13
SH3GL1-201ENST00000269886 ERVV-2B6SEH9 535 aa28.34■■■□□ 2.13
SH3GL1-201ENST00000269886 DYNC1I1O14576 645 aa28.34■■■□□ 2.13
SH3GL1-201ENST00000269886 RNF113AO15541 343 aaKnown RBP28.34■■■□□ 2.13
SH3GL1-201ENST00000269886 TTLL5Q6EMB2 1281 aa28.34■■■□□ 2.13
SH3GL1-201ENST00000269886 M0R2C6 588 aa28.33■■■□□ 2.13
SH3GL1-201ENST00000269886 ADD1P35611 737 aaKnown RBP28.33■■■□□ 2.13
SH3GL1-201ENST00000269886 SPTLC3Q9NUV7 552 aa28.33■■■□□ 2.13
SH3GL1-201ENST00000269886 CFAP45Q9UL16 551 aa28.33■■■□□ 2.13
SH3GL1-201ENST00000269886 KCPQ6ZWJ8 1503 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms