RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CARMIL3Q8ND23 1372 aa19.86■□□□□ 0.77
TPM1-201ENST00000267996 ADORA1P30542 326 aa19.86■□□□□ 0.77
TPM1-201ENST00000267996 BECN1Q14457 450 aa19.86■□□□□ 0.77
TPM1-201ENST00000267996 TICAM2Q86XR7 235 aa19.86■□□□□ 0.77
TPM1-201ENST00000267996 RGPD3A6NKT7 1758 aaPredicted RBP19.85■□□□□ 0.77
TPM1-201ENST00000267996 RGPD4Q7Z3J3 1758 aa19.85■□□□□ 0.77
TPM1-201ENST00000267996 CASZ1Q86V15 1759 aa19.85■□□□□ 0.77
TPM1-201ENST00000267996 GYS1P13807 737 aa19.85■□□□□ 0.77
TPM1-201ENST00000267996 FGFR2P21802 821 aa19.85■□□□□ 0.77
TPM1-201ENST00000267996 GTF2E1P29083 439 aaPredicted RBP19.85■□□□□ 0.77
TPM1-201ENST00000267996 RUFY2Q8WXA3 655 aa19.85■□□□□ 0.77
TPM1-201ENST00000267996 CDC5LQ99459 802 aaKnown RBP19.85■□□□□ 0.77
TPM1-201ENST00000267996 SNRKQ9NRH2 765 aa19.85■□□□□ 0.77
TPM1-201ENST00000267996 DIAPH3Q9NSV4 1193 aa19.85■□□□□ 0.77
TPM1-201ENST00000267996 IGHMBP2P38935 993 aaKnown RBP19.84■□□□□ 0.77
TPM1-201ENST00000267996 AKT1S1Q96B36 256 aa19.84■□□□□ 0.77
TPM1-201ENST00000267996 MPHOSPH8Q99549 860 aa19.84■□□□□ 0.77
TPM1-201ENST00000267996 CWC27Q6UX04 472 aaKnown RBP19.84■□□□□ 0.77
TPM1-201ENST00000267996 SNX21Q969T3 373 aa19.84■□□□□ 0.77
TPM1-201ENST00000267996 EDC3Q96F86 508 aaKnown RBP19.84■□□□□ 0.77
TPM1-201ENST00000267996 TBC1D2Q9BYX2 928 aa19.84■□□□□ 0.77
TPM1-201ENST00000267996 SPEF2Q9C093 1822 aa19.84■□□□□ 0.77
TPM1-201ENST00000267996 COL4A1P02462 1669 aa19.83■□□□□ 0.77
TPM1-201ENST00000267996 TM4SF1P30408 202 aa19.83■□□□□ 0.76
TPM1-201ENST00000267996 PUM3Q15397 648 aaKnown RBP19.83■□□□□ 0.76
TPM1-201ENST00000267996 CCDC158Q5M9N0 1113 aa19.83■□□□□ 0.76
TPM1-201ENST00000267996 IL17RAQ96F46 866 aa19.83■□□□□ 0.76
TPM1-201ENST00000267996 ZNF512BQ96KM6 892 aaPredicted RBP19.83■□□□□ 0.76
TPM1-201ENST00000267996 NLRP3Q96P20 1036 aa19.83■□□□□ 0.76
TPM1-201ENST00000267996 FSD1Q9BTV5 496 aa19.83■□□□□ 0.76
TPM1-201ENST00000267996 ANO2Q9NQ90 1003 aa19.83■□□□□ 0.76
TPM1-201ENST00000267996 IFIT1P09914 478 aaKnown RBP19.82■□□□□ 0.76
TPM1-201ENST00000267996 SLC4A3P48751 1232 aa19.82■□□□□ 0.76
TPM1-201ENST00000267996 LSG1Q9H089 658 aaKnown RBP19.82■□□□□ 0.76
TPM1-201ENST00000267996 RAD50Q92878 1312 aa19.82■□□□□ 0.76
TPM1-201ENST00000267996 ARAP2Q8WZ64 1704 aa19.82■□□□□ 0.76
TPM1-201ENST00000267996 ZNF827Q17R98 1081 aa19.81■□□□□ 0.76
TPM1-201ENST00000267996 KBTBD3Q8NAB2 608 aa19.81■□□□□ 0.76
TPM1-201ENST00000267996 LPIN2Q92539 896 aa19.81■□□□□ 0.76
TPM1-201ENST00000267996 DNAJC2Q99543 621 aaKnown RBP19.81■□□□□ 0.76
TPM1-201ENST00000267996 DAXXQ9UER7 740 aaPredicted RBP19.81■□□□□ 0.76
TPM1-201ENST00000267996 NMIQ13287 307 aaPredicted RBP19.81■□□□□ 0.76
TPM1-201ENST00000267996 RABEP1Q15276 862 aa19.81■□□□□ 0.76
TPM1-201ENST00000267996 GORABQ5T7V8 394 aa19.81■□□□□ 0.76
TPM1-201ENST00000267996 ANKRD18AQ8IVF6 992 aa19.81■□□□□ 0.76
TPM1-201ENST00000267996 BSDC1Q9NW68 430 aaPredicted RBP19.81■□□□□ 0.76
TPM1-201ENST00000267996 PAG1Q9NWQ8 432 aa19.81■□□□□ 0.76
TPM1-201ENST00000267996 NDUFB9Q9Y6M9 179 aa19.81■□□□□ 0.76
TPM1-201ENST00000267996 ANAPC15P60006 121 aa19.8■□□□□ 0.76
TPM1-201ENST00000267996 TTC39AQ5SRH9 613 aa19.8■□□□□ 0.76
TPM1-201ENST00000267996 FAM227BQ96M60 508 aa19.8■□□□□ 0.76
TPM1-201ENST00000267996 HELBQ8NG08 1087 aaPredicted RBP19.79■□□□□ 0.76
TPM1-201ENST00000267996 TNRC6CQ9HCJ0 1690 aaKnown RBP19.79■□□□□ 0.76
TPM1-201ENST00000267996 MED23Q9ULK4 1368 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 GOLIM4O00461 696 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 MCCP23508 829 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 CHRNDQ07001 517 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 DDX46Q7L014 1031 aaKnown RBP19.78■□□□□ 0.76
TPM1-201ENST00000267996 CNBD1Q8NA66 436 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 A0A0D9SFI3 127 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 SLC5A1P13866 664 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 HSPA4P34932 840 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 SCARF1Q14162 830 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 PRR5LQ6MZQ0 368 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 KIAA1211Q6ZU35 1233 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 FLAD1Q8NFF5 587 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 CELF1Q92879 486 aaKnown RBP19.78■□□□□ 0.76
TPM1-201ENST00000267996 TFCP2L1Q9NZI6 479 aa19.78■□□□□ 0.76
TPM1-201ENST00000267996 AKAP11Q9UKA4 1901 aa19.77■□□□□ 0.76
TPM1-201ENST00000267996 TAF1P21675 1872 aa19.77■□□□□ 0.76
TPM1-201ENST00000267996 A0A1B0GUL6 1792 aa19.77■□□□□ 0.76
TPM1-201ENST00000267996 ARID4AP29374 1257 aaPredicted RBP19.77■□□□□ 0.76
TPM1-201ENST00000267996 CCDC24Q8N4L8 307 aa19.77■□□□□ 0.76
TPM1-201ENST00000267996 TAF5LO75529 589 aa19.76■□□□□ 0.75
TPM1-201ENST00000267996 SERPINB2P05120 415 aa19.76■□□□□ 0.75
TPM1-201ENST00000267996 RPS8P62241 208 aaKnown RBP19.76■□□□□ 0.75
TPM1-201ENST00000267996 CCDC102BQ68D86 513 aa19.76■□□□□ 0.75
TPM1-201ENST00000267996 COL23A1Q86Y22 540 aaPredicted RBP19.76■□□□□ 0.75
TPM1-201ENST00000267996 UQCRFS1P1P0C7P4 283 aa19.75■□□□□ 0.75
TPM1-201ENST00000267996 DDR1Q08345 913 aa19.75■□□□□ 0.75
TPM1-201ENST00000267996 PALD1Q9ULE6 856 aa19.75■□□□□ 0.75
TPM1-201ENST00000267996 MINPP1Q9UNW1 487 aa19.75■□□□□ 0.75
TPM1-201ENST00000267996 CCDC171Q6TFL3 1326 aa19.75■□□□□ 0.75
TPM1-201ENST00000267996 POLRMTO00411 1230 aaKnown RBP19.75■□□□□ 0.75
TPM1-201ENST00000267996 MCAMP43121 646 aa19.75■□□□□ 0.75
TPM1-201ENST00000267996 PHKA1P46020 1223 aa19.75■□□□□ 0.75
TPM1-201ENST00000267996 PTH1RQ03431 593 aa19.75■□□□□ 0.75
TPM1-201ENST00000267996 HSCBQ8IWL3 235 aa19.75■□□□□ 0.75
TPM1-201ENST00000267996 ANTXR1Q9H6X2 564 aa19.75■□□□□ 0.75
TPM1-201ENST00000267996 SNAP23O00161 211 aa19.74■□□□□ 0.75
TPM1-201ENST00000267996 KCNB2Q92953 911 aa19.74■□□□□ 0.75
TPM1-201ENST00000267996 CAMKK2Q96RR4 588 aa19.74■□□□□ 0.75
TPM1-201ENST00000267996 NPHP1O15259 732 aa19.73■□□□□ 0.75
TPM1-201ENST00000267996 ZAP70P43403 619 aa19.73■□□□□ 0.75
TPM1-201ENST00000267996 FKBP4Q02790 459 aaKnown RBP eCLIP19.73■□□□□ 0.75
TPM1-201ENST00000267996 UBE4AQ14139 1066 aa19.73■□□□□ 0.75
TPM1-201ENST00000267996 CRY2Q49AN0 593 aa19.73■□□□□ 0.75
TPM1-201ENST00000267996 ZMYM1Q5SVZ6 1142 aa19.73■□□□□ 0.75
TPM1-201ENST00000267996 ERICH6Q7L0X2 663 aa19.73■□□□□ 0.75
TPM1-201ENST00000267996 NLGN1Q8N2Q7 840 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms