RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 APPP05067 770 aa13.47□□□□□ -0.25
CLSTN3-201ENST00000266546 IFIT5Q13325 482 aaKnown RBP13.47□□□□□ -0.25
CLSTN3-201ENST00000266546 GCKRQ14397 625 aa13.47□□□□□ -0.25
CLSTN3-201ENST00000266546 WASHC4Q2M389 1173 aa13.47□□□□□ -0.25
CLSTN3-201ENST00000266546 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
CLSTN3-201ENST00000266546 NOC3LQ8WTT2 800 aaKnown RBP13.47□□□□□ -0.25
CLSTN3-201ENST00000266546 CEP135Q66GS9 1140 aa13.46□□□□□ -0.25
CLSTN3-201ENST00000266546 KRT222Q8N1A0 295 aa13.46□□□□□ -0.25
CLSTN3-201ENST00000266546 TRMT112Q9UI30 125 aaKnown RBP13.46□□□□□ -0.25
CLSTN3-201ENST00000266546 JCADQ9P266 1359 aa13.46□□□□□ -0.25
CLSTN3-201ENST00000266546 TTC41PQ6P2S7 1318 aa13.46□□□□□ -0.25
CLSTN3-201ENST00000266546 IPO7O95373 1038 aaKnown RBP13.46□□□□□ -0.25
CLSTN3-201ENST00000266546 PXDNQ92626 1479 aa13.46□□□□□ -0.25
CLSTN3-201ENST00000266546 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
CLSTN3-201ENST00000266546 CCDC8Q9H0W5 538 aaPredicted RBP13.46□□□□□ -0.25
CLSTN3-201ENST00000266546 ANO10Q9NW15 660 aa13.46□□□□□ -0.25
CLSTN3-201ENST00000266546 USP21Q9UK80 565 aa13.46□□□□□ -0.25
CLSTN3-201ENST00000266546 PEAK1Q9H792 1746 aa13.46□□□□□ -0.26
CLSTN3-201ENST00000266546 F13A1P00488 732 aa13.46□□□□□ -0.26
CLSTN3-201ENST00000266546 KRT32Q14532 448 aa13.46□□□□□ -0.26
CLSTN3-201ENST00000266546 UNC5CLQ8IV45 518 aa13.46□□□□□ -0.26
CLSTN3-201ENST00000266546 ANKRD20A12PQ8NF67 263 aa13.46□□□□□ -0.26
CLSTN3-201ENST00000266546 PXDNLA1KZ92 1463 aa13.45□□□□□ -0.26
CLSTN3-201ENST00000266546 ACSBG1Q96GR2 724 aa13.45□□□□□ -0.26
CLSTN3-201ENST00000266546 BOLA2Q9H3K6 86 aa13.45□□□□□ -0.26
CLSTN3-201ENST00000266546 NEURL1BA8MQ27 555 aa13.45□□□□□ -0.26
CLSTN3-201ENST00000266546 DNM1Q05193 864 aaKnown RBP13.45□□□□□ -0.26
CLSTN3-201ENST00000266546 DNAJC10Q8IXB1 793 aa13.45□□□□□ -0.26
CLSTN3-201ENST00000266546 C17orf53Q8N3J3 647 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-201ENST00000266546 KIF20AO95235 890 aa13.45□□□□□ -0.26
CLSTN3-201ENST00000266546 A1BGP04217 495 aa13.45□□□□□ -0.26
CLSTN3-201ENST00000266546 TRERF1Q96PN7 1200 aa13.45□□□□□ -0.26
CLSTN3-201ENST00000266546 MPHOSPH8Q99549 860 aa13.45□□□□□ -0.26
CLSTN3-201ENST00000266546 ANKRD18BA2A2Z9 1011 aa13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 CD2BP2O95400 341 aaKnown RBP13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 PKP1Q13835 747 aa13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 CCDC85AQ96PX6 553 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 FEZ1Q99689 392 aa13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 KAT6BQ8WYB5 2073 aa13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 CAVIN2O95810 425 aa13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 NBPF7P0C2Y1 421 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 DZIP3Q86Y13 1208 aaKnown RBP13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 JARID2Q92833 1246 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 ZPR1O75312 459 aa13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 IL15P40933 162 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 AKAP17AQ02040 695 aaKnown RBP13.44□□□□□ -0.26
CLSTN3-201ENST00000266546 PTGS1P23219 599 aa13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 TSC1Q92574 1164 aa13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 DHX16O60231 1041 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 ANO6Q4KMQ2 910 aa13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 LMBR1LQ6UX01 489 aa13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 EVI5LQ96CN4 794 aa13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 IBTKQ9P2D0 1353 aaPredicted RBP13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 CTAGE5O15320 804 aa13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 IGHMBP2P38935 993 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 SAFBQ15424 915 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 TTC39AQ5SRH9 613 aa13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 TTLL5Q6EMB2 1281 aa13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 NFXL1Q6ZNB6 911 aa13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 BBXQ8WY36 941 aaPredicted RBP13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 ERCC4Q92889 916 aaPredicted RBP13.43□□□□□ -0.26
CLSTN3-201ENST00000266546 URI1O94763 535 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 PIP4K2AP48426 406 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 BMS1Q14692 1282 aaKnown RBP13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 TIGD1Q96MW7 591 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 BICC1Q9H694 974 aaKnown RBP13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 LTN1O94822 1766 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 CBFA2T2O43439 604 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 FAM98CQ17RN3 349 aaKnown RBP13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 PROSER3Q2NL68 480 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 PARP10Q53GL7 1025 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 DACT1Q9NYF0 836 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 SPATA31A6Q5VVP1 1343 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 CCDC171Q6TFL3 1326 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 PNMA6EA0A0J9YXQ4 647 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 POLR3GO15318 223 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 VPS37DQ86XT2 251 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 JMYQ8N9B5 988 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 CCDC87Q9NVE4 849 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 SMTNL1A8MU46 457 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 RIOK3O14730 519 aaKnown RBP13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 GSDMDP57764 484 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 ZSCAN25Q6NSZ9 544 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 GPT2Q8TD30 523 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 TSPYL1Q9H0U9 437 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
CLSTN3-201ENST00000266546 GTF2F1P35269 517 aaKnown RBP eCLIP13.41□□□□□ -0.262e-7■■■■■ 29.2
CLSTN3-201ENST00000266546 TYRO3Q06418 890 aa13.41□□□□□ -0.26
CLSTN3-201ENST00000266546 NECAB1Q8N987 351 aa13.41□□□□□ -0.26
CLSTN3-201ENST00000266546 NOL10Q9BSC4 688 aaKnown RBP13.41□□□□□ -0.26
CLSTN3-201ENST00000266546 OGFRQ9NZT2 677 aa13.41□□□□□ -0.26
CLSTN3-201ENST00000266546 MEGF6O75095 1541 aa13.41□□□□□ -0.26
CLSTN3-201ENST00000266546 SKILP12757 684 aa13.41□□□□□ -0.26
CLSTN3-201ENST00000266546 GPTP24298 496 aa13.41□□□□□ -0.26
CLSTN3-201ENST00000266546 SNW1Q13573 536 aaKnown RBP13.41□□□□□ -0.26
CLSTN3-201ENST00000266546 CFAP100Q494V2 611 aa13.41□□□□□ -0.26
CLSTN3-201ENST00000266546 METTL24Q5JXM2 366 aa13.41□□□□□ -0.26
CLSTN3-201ENST00000266546 SUCLG2Q96I99 432 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms