RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PLBD2Q8NHP8 589 aa16.13■□□□□ 0.17
CDH3-201ENST00000264012 USP19O94966 1318 aa16.13■□□□□ 0.17
CDH3-201ENST00000264012 LRSAM1Q6UWE0 723 aa16.13■□□□□ 0.17
CDH3-201ENST00000264012 SBNO2Q9Y2G9 1366 aa16.13■□□□□ 0.17
CDH3-201ENST00000264012 ISM2Q6H9L7 571 aa16.13■□□□□ 0.17
CDH3-201ENST00000264012 IQCEQ6IPM2 695 aa16.13■□□□□ 0.17
CDH3-201ENST00000264012 NYXQ9GZU5 481 aa16.13■□□□□ 0.17
CDH3-201ENST00000264012 DNM1Q05193 864 aaKnown RBP16.12■□□□□ 0.17
CDH3-201ENST00000264012 SPA17Q15506 151 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 KCNG4Q8TDN1 519 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 CABP5Q9NP86 173 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 KDM2BQ8NHM5 1336 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 TSPY3P0CV98 308 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 TSPY8P0CW00 308 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 IDEP14735 1019 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 UVSSAQ2YD98 709 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 KANK3Q6NY19 840 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 CALML4Q96GE6 196 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 FAM89AQ96GI7 184 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 YEATS2Q9ULM3 1422 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 FGFR1OPO95684 399 aaKnown RBP16.12■□□□□ 0.17
CDH3-201ENST00000264012 MATR3P43243 847 aaKnown RBP eCLIP16.12■□□□□ 0.17
CDH3-201ENST00000264012 SYKP43405 635 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 CACNA2D4Q7Z3S7 1137 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 KIF18AQ8NI77 898 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 NBPF7P0C2Y1 421 aaPredicted RBP16.12■□□□□ 0.17
CDH3-201ENST00000264012 CPLX3Q8WVH0 158 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 FEZ1Q99689 392 aa16.12■□□□□ 0.17
CDH3-201ENST00000264012 KIF20AO95235 890 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 PYM1Q9BRP8 204 aaKnown RBP16.11■□□□□ 0.17
CDH3-201ENST00000264012 SLC52A2Q9HAB3 445 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 RTCBQ9Y3I0 505 aaKnown RBP16.11■□□□□ 0.17
CDH3-201ENST00000264012 ABCA8O94911 1581 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 NEMFO60524 1076 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 CHST3Q7LGC8 479 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 RNF123Q5XPI4 1314 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 CCDC171Q6TFL3 1326 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 GSDMDP57764 484 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 TAF4BQ92750 862 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 MAGEB6P1A0A0J9YX57 407 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 EYA2O00167 538 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 AMPD3Q01432 767 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 RAB3GAP1Q15042 981 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 DHX32Q7L7V1 743 aaKnown RBP16.11■□□□□ 0.17
CDH3-201ENST00000264012 TMC6Q7Z403 805 aa16.11■□□□□ 0.17
CDH3-201ENST00000264012 TIMM10P62072 90 aa16.1■□□□□ 0.17
CDH3-201ENST00000264012 INTS4Q96HW7 963 aaKnown RBP16.1■□□□□ 0.17
CDH3-201ENST00000264012 PLXNC1O60486 1568 aa16.1■□□□□ 0.17
CDH3-201ENST00000264012 GNAT2P19087 354 aa16.1■□□□□ 0.17
CDH3-201ENST00000264012 DACT1Q9NYF0 836 aa16.1■□□□□ 0.17
CDH3-201ENST00000264012 CCDC178Q5BJE1 867 aa16.1■□□□□ 0.17
CDH3-201ENST00000264012 RUFY3Q7L099 469 aa16.1■□□□□ 0.17
CDH3-201ENST00000264012 MAGEB6Q8N7X4 407 aa16.1■□□□□ 0.17
CDH3-201ENST00000264012 MRPS27Q92552 414 aaKnown RBP16.1■□□□□ 0.17
CDH3-201ENST00000264012 NUP88Q99567 741 aaPredicted RBP16.1■□□□□ 0.17
CDH3-201ENST00000264012 ZFYVE16Q7Z3T8 1539 aa16.1■□□□□ 0.17
CDH3-201ENST00000264012 ARHGEF10O15013 1369 aa16.1■□□□□ 0.17
CDH3-201ENST00000264012 GOLGA6L10A6NI86 522 aa16.09■□□□□ 0.17
CDH3-201ENST00000264012 KIF5CO60282 957 aa16.09■□□□□ 0.17
CDH3-201ENST00000264012 APOBRQ0VD83 1088 aa16.09■□□□□ 0.17
CDH3-201ENST00000264012 MIGA1Q8NAN2 632 aa16.09■□□□□ 0.17
CDH3-201ENST00000264012 KLHDC4Q8TBB5 520 aa16.09■□□□□ 0.17
CDH3-201ENST00000264012 CCDC148Q8NFR7 591 aa16.09■□□□□ 0.17
CDH3-201ENST00000264012 TRMT1Q9NXH9 659 aaKnown RBP16.09■□□□□ 0.17
CDH3-201ENST00000264012 EIF3JO75822 258 aaKnown RBP16.09■□□□□ 0.17
CDH3-201ENST00000264012 BMP15O95972 392 aa16.09■□□□□ 0.17
CDH3-201ENST00000264012 EHMT1Q9H9B1 1298 aa16.09■□□□□ 0.17
CDH3-201ENST00000264012 PNMA6EA0A0J9YXQ4 647 aa16.09■□□□□ 0.17
CDH3-201ENST00000264012 F8W031 263 aaPredicted RBP16.09■□□□□ 0.17
CDH3-201ENST00000264012 ZNF804AQ7Z570 1209 aa16.09■□□□□ 0.17
CDH3-201ENST00000264012 CCDC191Q8NCU4 936 aa16.09■□□□□ 0.17
CDH3-201ENST00000264012 CWC15Q9P013 229 aaKnown RBP16.09■□□□□ 0.17
CDH3-201ENST00000264012 A0A1B0GUL7 405 aa16.08■□□□□ 0.17
CDH3-201ENST00000264012 URI1O94763 535 aaPredicted RBP16.08■□□□□ 0.17
CDH3-201ENST00000264012 MTIF2P46199 727 aaKnown RBP16.08■□□□□ 0.17
CDH3-201ENST00000264012 GNAQP50148 359 aa16.08■□□□□ 0.17
CDH3-201ENST00000264012 TNNI3KQ59H18 835 aa16.08■□□□□ 0.16
CDH3-201ENST00000264012 FPGT-TNNI3KV9GXZ4 949 aa16.08■□□□□ 0.16
CDH3-201ENST00000264012 DBNDD2Q9BQY9 259 aa16.08■□□□□ 0.16
CDH3-201ENST00000264012 NSFL1CQ9UNZ2 370 aaKnown RBP16.08■□□□□ 0.16
CDH3-201ENST00000264012 MYO5CQ9NQX4 1742 aa16.08■□□□□ 0.16
CDH3-201ENST00000264012 A1BGP04217 495 aa16.08■□□□□ 0.16
CDH3-201ENST00000264012 EIF4A1P60842 406 aaKnown RBP16.08■□□□□ 0.16
CDH3-201ENST00000264012 KIF4BQ2VIQ3 1234 aa16.08■□□□□ 0.16
CDH3-201ENST00000264012 C16orf45Q96MC5 204 aaPredicted RBP16.08■□□□□ 0.16
CDH3-201ENST00000264012 KIAA0232Q92628 1395 aa16.07■□□□□ 0.16
CDH3-201ENST00000264012 YEATS4O95619 227 aa16.07■□□□□ 0.16
CDH3-201ENST00000264012 TNNT1P13805 278 aa16.07■□□□□ 0.16
CDH3-201ENST00000264012 ZNF496Q96IT1 587 aaPredicted RBP16.07■□□□□ 0.16
CDH3-201ENST00000264012 MARCKSP29966 332 aaPredicted RBP16.07■□□□□ 0.16
CDH3-201ENST00000264012 CPA1P15085 419 aa16.07■□□□□ 0.16
CDH3-201ENST00000264012 CLCN1P35523 988 aa16.07■□□□□ 0.16
CDH3-201ENST00000264012 MAGI2Q86UL8 1455 aa16.07■□□□□ 0.16
CDH3-201ENST00000264012 PTPDC1A2A3K4 754 aa16.07■□□□□ 0.16
CDH3-201ENST00000264012 LEKR1Q6ZMV7 388 aa16.07■□□□□ 0.16
CDH3-201ENST00000264012 DDX17Q92841 729 aaKnown RBP16.07■□□□□ 0.16
CDH3-201ENST00000264012 FAM200AQ8TCP9 573 aa16.06■□□□□ 0.16
CDH3-201ENST00000264012 SUCLG2Q96I99 432 aa16.06■□□□□ 0.16
CDH3-201ENST00000264012 HELLSQ9NRZ9 838 aa16.06■□□□□ 0.16
CDH3-201ENST00000264012 SH3TC1Q8TE82 1336 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms