RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 UNC13BO14795 1591 aa18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 DHX8Q14562 1220 aaKnown RBP18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 TAF7LQ5H9L4 462 aa18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 MICALL1Q8N3F8 863 aa18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 H0YHG0 523 aa18.41■□□□□ 0.54
PRPF40B-201ENST00000261897 HSP90AB3PQ58FF7 597 aa18.41■□□□□ 0.54
PRPF40B-201ENST00000261897 RRP15Q9Y3B9 282 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-201ENST00000261897 FANCAO15360 1455 aa18.41■□□□□ 0.54
PRPF40B-201ENST00000261897 RXRAP19793 462 aa18.41■□□□□ 0.54
PRPF40B-201ENST00000261897 MPRIPQ6WCQ1 1025 aa18.41■□□□□ 0.54
PRPF40B-201ENST00000261897 ORC3Q9UBD5 711 aaPredicted RBP18.41■□□□□ 0.54
PRPF40B-201ENST00000261897 NDUFA8P51970 172 aa18.41■□□□□ 0.54
PRPF40B-201ENST00000261897 IQCB1Q15051 598 aa18.41■□□□□ 0.54
PRPF40B-201ENST00000261897 MTX1Q13505 466 aa18.4■□□□□ 0.54
PRPF40B-201ENST00000261897 TTC31Q49AM3 519 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-201ENST00000261897 ARMCX5Q6P1M9 558 aa18.4■□□□□ 0.54
PRPF40B-201ENST00000261897 ERC1Q8IUD2 1116 aa18.4■□□□□ 0.54
PRPF40B-201ENST00000261897 SSH3Q8TE77 659 aa18.4■□□□□ 0.54
PRPF40B-201ENST00000261897 C8orf76Q96K31 380 aa18.4■□□□□ 0.54
PRPF40B-201ENST00000261897 RAI14Q9P0K7 980 aa18.4■□□□□ 0.54
PRPF40B-201ENST00000261897 ZSCAN12O43309 604 aa18.4■□□□□ 0.54
PRPF40B-201ENST00000261897 IRX2Q9BZI1 471 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-201ENST00000261897 LOC102724159A0A0B4J2E5 919 aa18.4■□□□□ 0.54
PRPF40B-201ENST00000261897 PWP2Q15269 919 aaKnown RBP18.4■□□□□ 0.54
PRPF40B-201ENST00000261897 CCDC85AQ96PX6 553 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-201ENST00000261897 ADAM21Q9UKJ8 722 aa18.39■□□□□ 0.53
PRPF40B-201ENST00000261897 KCNQ3O43525 872 aa18.39■□□□□ 0.53
PRPF40B-201ENST00000261897 NYAP1Q6ZVC0 841 aa18.39■□□□□ 0.53
PRPF40B-201ENST00000261897 TRMT44Q8IYL2 757 aaKnown RBP18.39■□□□□ 0.53
PRPF40B-201ENST00000261897 EAF2Q96CJ1 260 aaPredicted RBP18.39■□□□□ 0.53
PRPF40B-201ENST00000261897 EYA1Q99502 592 aa18.39■□□□□ 0.53
PRPF40B-201ENST00000261897 CAVIN2O95810 425 aa18.38■□□□□ 0.53
PRPF40B-201ENST00000261897 ZSCAN16Q9H4T2 348 aaPredicted RBP18.38■□□□□ 0.53
PRPF40B-201ENST00000261897 MNAT1P51948 309 aa18.38■□□□□ 0.53
PRPF40B-201ENST00000261897 SNRKQ9NRH2 765 aa18.38■□□□□ 0.53
PRPF40B-201ENST00000261897 MAP3K4Q9Y6R4 1608 aa18.38■□□□□ 0.53
PRPF40B-201ENST00000261897 SSH2Q76I76 1423 aa18.38■□□□□ 0.53
PRPF40B-201ENST00000261897 HIP1O00291 1037 aa18.38■□□□□ 0.53
PRPF40B-201ENST00000261897 CCP110O43303 1012 aa18.38■□□□□ 0.53
PRPF40B-201ENST00000261897 PARD6BQ9BYG5 372 aa18.38■□□□□ 0.53
PRPF40B-201ENST00000261897 CENPHQ9H3R5 247 aa18.38■□□□□ 0.53
PRPF40B-201ENST00000261897 SUGCTQ9HAC7 445 aa18.37■□□□□ 0.53
PRPF40B-201ENST00000261897 FKBP4Q02790 459 aaKnown RBP eCLIP18.37■□□□□ 0.53
PRPF40B-201ENST00000261897 PCDHA7Q9UN72 937 aa18.37■□□□□ 0.53
PRPF40B-201ENST00000261897 ABCC1P33527 1531 aa18.37■□□□□ 0.53
PRPF40B-201ENST00000261897 GOLIM4O00461 696 aa18.37■□□□□ 0.53
PRPF40B-201ENST00000261897 WDHD1O75717 1129 aaPredicted RBP18.37■□□□□ 0.53
PRPF40B-201ENST00000261897 STX17P56962 302 aa18.37■□□□□ 0.53
PRPF40B-201ENST00000261897 NECTIN1Q15223 517 aa18.37■□□□□ 0.53
PRPF40B-201ENST00000261897 ZNF827Q17R98 1081 aa18.37■□□□□ 0.53
PRPF40B-201ENST00000261897 DHX40Q8IX18 779 aaKnown RBP18.37■□□□□ 0.53
PRPF40B-201ENST00000261897 SCRN1Q12765 414 aa18.36■□□□□ 0.53
PRPF40B-201ENST00000261897 TOB2Q14106 344 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-201ENST00000261897 LRRFIP1Q32MZ4 808 aaKnown RBP18.36■□□□□ 0.53
PRPF40B-201ENST00000261897 SLC26A8Q96RN1 970 aa18.36■□□□□ 0.53
PRPF40B-201ENST00000261897 NPATQ14207 1427 aa18.36■□□□□ 0.53
PRPF40B-201ENST00000261897 PREX2Q70Z35 1606 aa18.36■□□□□ 0.53
PRPF40B-201ENST00000261897 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
PRPF40B-201ENST00000261897 EIF3JO75822 258 aaKnown RBP18.36■□□□□ 0.53
PRPF40B-201ENST00000261897 KIF24Q5T7B8 1368 aa18.36■□□□□ 0.53
PRPF40B-201ENST00000261897 ELP1O95163 1332 aa18.36■□□□□ 0.53
PRPF40B-201ENST00000261897 GPHNQ9NQX3 736 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-201ENST00000261897 FAN1Q9Y2M0 1017 aa18.36■□□□□ 0.53
PRPF40B-201ENST00000261897 GOLGA1Q92805 767 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 ZFYVE9O95405 1425 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 SPTLC2O15270 562 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 ZNF569Q5MCW4 686 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 DHX58Q96C10 678 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 WDR24Q96S15 920 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 CLIC4Q9Y696 253 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 ACEP12821 1306 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 SYKP43405 635 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 RESTQ13127 1097 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 KRT32Q14532 448 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 LONRF2Q1L5Z9 754 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 NFXL1Q6ZNB6 911 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 PUS7Q96PZ0 661 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 SLC52A1Q9NWF4 448 aa18.35■□□□□ 0.53
PRPF40B-201ENST00000261897 ERLIN1O75477 346 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 ZNF202O95125 648 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 PNOCQ13519 176 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 RALYLQ86SE5 291 aaKnown RBP18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 CAGE1Q8TC20 777 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 DPF2Q92785 391 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 BAG1Q99933 345 aaPredicted RBP18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 KIAA1468Q9P260 1216 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 BTBD11A6QL63 1104 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 GOLGA8BA8MQT2 603 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 COBLO75128 1261 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 TPM1P09493 284 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 NEXNQ0ZGT2 675 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 PPFIBP1Q86W92 1011 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 GPIHBP1Q8IV16 184 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 TULP4Q9NRJ4 1543 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 PATL2C9JE40 543 aaKnown RBP18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 CNNM3Q8NE01 707 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 FANCLQ9NW38 375 aa18.34■□□□□ 0.53
PRPF40B-201ENST00000261897 CBFA2T2O43439 604 aa18.33■□□□□ 0.53
PRPF40B-201ENST00000261897 SASH3O75995 380 aa18.33■□□□□ 0.53
PRPF40B-201ENST00000261897 TFRCP02786 760 aaKnown RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms