RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CCZ1BP86790 482 aa18.64■□□□□ 0.58
LMNB1-201ENST00000261366 CCZ1P86791 482 aaPredicted RBP18.64■□□□□ 0.58
LMNB1-201ENST00000261366 TERF2Q15554 542 aa18.64■□□□□ 0.58
LMNB1-201ENST00000261366 PTPN21Q16825 1174 aa18.64■□□□□ 0.58
LMNB1-201ENST00000261366 FSIP1Q8NA03 581 aa18.64■□□□□ 0.58
LMNB1-201ENST00000261366 DBF4Q9UBU7 674 aaPredicted RBP18.64■□□□□ 0.58
LMNB1-201ENST00000261366 CFAP45Q9UL16 551 aa18.64■□□□□ 0.58
LMNB1-201ENST00000261366 HIP1O00291 1037 aa18.64■□□□□ 0.57
LMNB1-201ENST00000261366 APOBRQ0VD83 1088 aa18.64■□□□□ 0.57
LMNB1-201ENST00000261366 SDF4Q9BRK5 362 aa18.64■□□□□ 0.57
LMNB1-201ENST00000261366 ANKARQ7Z5J8 1434 aa18.64■□□□□ 0.57
LMNB1-201ENST00000261366 MYL6BP14649 208 aa18.64■□□□□ 0.57
LMNB1-201ENST00000261366 RBM6P78332 1123 aaKnown RBP18.64■□□□□ 0.57
LMNB1-201ENST00000261366 SYT10Q6XYQ8 523 aa18.64■□□□□ 0.57
LMNB1-201ENST00000261366 DDX46Q7L014 1031 aaKnown RBP18.64■□□□□ 0.57
LMNB1-201ENST00000261366 DHX40Q8IX18 779 aaKnown RBP18.64■□□□□ 0.57
LMNB1-201ENST00000261366 CCAR2Q8N163 923 aaKnown RBP18.64■□□□□ 0.57
LMNB1-201ENST00000261366 ZBTB9Q96C00 473 aa18.64■□□□□ 0.57
LMNB1-201ENST00000261366 A0A1B0GVL5 298 aa18.63■□□□□ 0.57
LMNB1-201ENST00000261366 GRM8O00222 908 aa18.63■□□□□ 0.57
LMNB1-201ENST00000261366 GABPB1Q06547 395 aaPredicted RBP18.63■□□□□ 0.57
LMNB1-201ENST00000261366 OTUD7BQ6GQQ9 843 aa18.63■□□□□ 0.57
LMNB1-201ENST00000261366 NALCNQ8IZF0 1738 aa18.63■□□□□ 0.57
LMNB1-201ENST00000261366 VGLL3A8MV65 326 aa18.63■□□□□ 0.57
LMNB1-201ENST00000261366 SYCP1Q15431 976 aa18.63■□□□□ 0.57
LMNB1-201ENST00000261366 NYAP1Q6ZVC0 841 aa18.63■□□□□ 0.57
LMNB1-201ENST00000261366 A0A0G2JLW4 131 aa18.62■□□□□ 0.57
LMNB1-201ENST00000261366 CYP21A2P08686 494 aa18.62■□□□□ 0.57
LMNB1-201ENST00000261366 PIK3C2AO00443 1686 aa18.62■□□□□ 0.57
LMNB1-201ENST00000261366 MTX1Q13505 466 aa18.62■□□□□ 0.57
LMNB1-201ENST00000261366 LMOD2Q6P5Q4 547 aa18.62■□□□□ 0.57
LMNB1-201ENST00000261366 KSR2Q6VAB6 950 aa18.62■□□□□ 0.57
LMNB1-201ENST00000261366 TMC6Q7Z403 805 aa18.62■□□□□ 0.57
LMNB1-201ENST00000261366 RAB11FIP4Q86YS3 637 aa18.62■□□□□ 0.57
LMNB1-201ENST00000261366 MRFAP1L1Q96HT8 127 aa18.62■□□□□ 0.57
LMNB1-201ENST00000261366 COL15A1P39059 1388 aa18.62■□□□□ 0.57
LMNB1-201ENST00000261366 SLU7O95391 586 aaKnown RBP18.61■□□□□ 0.57
LMNB1-201ENST00000261366 ORAI2Q96SN7 254 aa18.61■□□□□ 0.57
LMNB1-201ENST00000261366 SNW1Q13573 536 aaKnown RBP18.61■□□□□ 0.57
LMNB1-201ENST00000261366 PTPDC1A2A3K4 754 aa18.6■□□□□ 0.57
LMNB1-201ENST00000261366 ZRSR1Q15695 479 aaKnown RBP18.6■□□□□ 0.57
LMNB1-201ENST00000261366 EPHA10Q5JZY3 1008 aa18.6■□□□□ 0.57
LMNB1-201ENST00000261366 RIC3Q7Z5B4 369 aa18.6■□□□□ 0.57
LMNB1-201ENST00000261366 CEP57L1Q8IYX8 460 aa18.6■□□□□ 0.57
LMNB1-201ENST00000261366 ZNF446Q9NWS9 450 aa18.6■□□□□ 0.57
LMNB1-201ENST00000261366 HOMER1Q86YM7 354 aa18.6■□□□□ 0.57
LMNB1-201ENST00000261366 ERO1AQ96HE7 468 aa18.6■□□□□ 0.57
LMNB1-201ENST00000261366 CDC25BP30305 580 aa18.6■□□□□ 0.57
LMNB1-201ENST00000261366 FAM177A1Q8N128 213 aaPredicted RBP18.6■□□□□ 0.57
LMNB1-201ENST00000261366 ANO10Q9NW15 660 aa18.6■□□□□ 0.57
LMNB1-201ENST00000261366 IFNKQ9P0W0 207 aa18.6■□□□□ 0.57
LMNB1-201ENST00000261366 POLR3DP05423 398 aaPredicted RBP18.59■□□□□ 0.57
LMNB1-201ENST00000261366 ADD1P35611 737 aaKnown RBP18.59■□□□□ 0.57
LMNB1-201ENST00000261366 DPCR1Q3MIW9 517 aa18.59■□□□□ 0.57
LMNB1-201ENST00000261366 STOX1Q6ZVD7 989 aa18.59■□□□□ 0.57
LMNB1-201ENST00000261366 TMX1Q9H3N1 280 aa18.59■□□□□ 0.57
LMNB1-201ENST00000261366 ERBB3P21860 1342 aa18.59■□□□□ 0.57
LMNB1-201ENST00000261366 MED23Q9ULK4 1368 aa18.59■□□□□ 0.57
LMNB1-201ENST00000261366 SARM1Q6SZW1 724 aa18.59■□□□□ 0.57
LMNB1-201ENST00000261366 XPO4Q9C0E2 1151 aaKnown RBP18.59■□□□□ 0.57
LMNB1-201ENST00000261366 ZSCAN16Q9H4T2 348 aaPredicted RBP18.59■□□□□ 0.57
LMNB1-201ENST00000261366 HMG20BQ9P0W2 317 aa18.58■□□□□ 0.57
LMNB1-201ENST00000261366 DBNLQ9UJU6 430 aaKnown RBP18.58■□□□□ 0.57
LMNB1-201ENST00000261366 FMN2Q9NZ56 1722 aa18.58■□□□□ 0.56
LMNB1-201ENST00000261366 GOLGA8FQ08AF8 430 aa18.58■□□□□ 0.56
LMNB1-201ENST00000261366 GOLGA8DPQ0D2H9 430 aa18.58■□□□□ 0.56
LMNB1-201ENST00000261366 TFCP2Q12800 502 aa18.58■□□□□ 0.56
LMNB1-201ENST00000261366 E4F1Q66K89 784 aaPredicted RBP18.58■□□□□ 0.56
LMNB1-201ENST00000261366 NSUN7Q8NE18 718 aaKnown RBP18.58■□□□□ 0.56
LMNB1-201ENST00000261366 ALDH1L1O75891 902 aa18.57■□□□□ 0.56
LMNB1-201ENST00000261366 SLC39A6Q13433 755 aa18.57■□□□□ 0.56
LMNB1-201ENST00000261366 SF3A1Q15459 793 aaKnown RBP18.57■□□□□ 0.56
LMNB1-201ENST00000261366 NBPF11Q86T75 865 aa18.57■□□□□ 0.56
LMNB1-201ENST00000261366 GJB4Q9NTQ9 266 aa18.57■□□□□ 0.56
LMNB1-201ENST00000261366 BABAM1Q9NWV8 329 aa18.57■□□□□ 0.56
LMNB1-201ENST00000261366 POLR3GO15318 223 aaPredicted RBP18.57■□□□□ 0.56
LMNB1-201ENST00000261366 CTDNEP1O95476 244 aa18.57■□□□□ 0.56
LMNB1-201ENST00000261366 NEMFO60524 1076 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 GIGYF1O75420 1035 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-201ENST00000261366 PDIA4P13667 645 aaKnown RBP18.56■□□□□ 0.56
LMNB1-201ENST00000261366 FAM160A1Q05DH4 1040 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 DBNDD2Q9BQY9 259 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 GPHNQ9NQX3 736 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-201ENST00000261366 LMOD1P29536 600 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-201ENST00000261366 KRT32Q14532 448 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 ARHGAP29Q52LW3 1261 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 KLHL34Q8N239 644 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 LINS1Q8NG48 757 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 PPP1R13BQ96KQ4 1090 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 EPC1Q9H2F5 836 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 NDUFA8P51970 172 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 MYD88Q99836 296 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 RCOR1Q9UKL0 485 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 PCDHA7Q9UN72 937 aa18.56■□□□□ 0.56
LMNB1-201ENST00000261366 CAVIN2O95810 425 aa18.55■□□□□ 0.56
LMNB1-201ENST00000261366 IGKV5-2P06315 115 aa18.55■□□□□ 0.56
LMNB1-201ENST00000261366 HSP90AA4PQ58FG1 418 aa18.55■□□□□ 0.56
LMNB1-201ENST00000261366 ARMCX5Q6P1M9 558 aa18.55■□□□□ 0.56
LMNB1-201ENST00000261366 DNAI1Q9UI46 699 aa18.55■□□□□ 0.56
LMNB1-201ENST00000261366 CTAGE5O15320 804 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms