RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 A0A0U1RQG5 324 aaPredicted RBP12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 FIBPO43427 364 aa12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 AK2P54819 239 aa12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 FAM193AP78312 1265 aa12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 FGD1P98174 961 aa12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 PLCB2Q00722 1185 aa12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 RNF20Q5VTR2 975 aa12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 CCDC8Q9H0W5 538 aaPredicted RBP12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 SIL1Q9H173 461 aa12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 DDX41Q9UJV9 622 aaKnown RBP12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 FBXO3Q9UK99 471 aa12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 DISP2A7MBM2 1401 aa12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 CCDC171Q6TFL3 1326 aa12.75□□□□□ -0.37
CHRNA1-201ENST00000261007 ATP5J2-PTCD1G3V325 749 aa12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 PTCD1O75127 700 aaKnown RBP12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 TRIM28Q13263 835 aaKnown RBP12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 RUFY3Q7L099 469 aa12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 FSD1Q9BTV5 496 aa12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 IL25Q9H293 177 aa12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 ELP1O95163 1332 aa12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 TJP1Q07157 1748 aa12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 STARD3NLO95772 234 aa12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 PSMA5P28066 241 aa12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 MAP3K11Q16584 847 aa12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 SPC24Q8NBT2 197 aa12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 CDCA7Q9BWT1 371 aaPredicted RBP12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 SH2B1Q9NRF2 756 aaPredicted RBP12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 MTMR6Q9Y217 621 aa12.74□□□□□ -0.37
CHRNA1-201ENST00000261007 CIAO1O76071 339 aa12.73□□□□□ -0.37
CHRNA1-201ENST00000261007 A1BGP04217 495 aa12.73□□□□□ -0.37
CHRNA1-201ENST00000261007 PTGS1P23219 599 aa12.73□□□□□ -0.37
CHRNA1-201ENST00000261007 IL15P40933 162 aaPredicted RBP12.73□□□□□ -0.37
CHRNA1-201ENST00000261007 PIP4K2AP48426 406 aaPredicted RBP12.73□□□□□ -0.37
CHRNA1-201ENST00000261007 FOXO4P98177 505 aa12.73□□□□□ -0.37
CHRNA1-201ENST00000261007 LMBR1LQ6UX01 489 aa12.73□□□□□ -0.37
CHRNA1-201ENST00000261007 KIF6Q6ZMV9 814 aa12.73□□□□□ -0.37
CHRNA1-201ENST00000261007 ZNF771Q7L3S4 317 aaPredicted RBP12.73□□□□□ -0.37
CHRNA1-201ENST00000261007 BTG4Q9NY30 223 aa12.73□□□□□ -0.37
CHRNA1-201ENST00000261007 HMG20BQ9P0W2 317 aa12.73□□□□□ -0.37
CHRNA1-201ENST00000261007 DNM1Q05193 864 aaKnown RBP12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 VPS53Q5VIR6 699 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 TTLL7Q6ZT98 887 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 MAP4K1Q92918 833 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 ISCA1Q9BUE6 129 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 BOLA2Q9H3K6 86 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 MED23Q9ULK4 1368 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 TNNT1P13805 278 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 TFCP2Q12800 502 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 TCIRG1Q13488 830 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 NECTIN1Q15223 517 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 PLA2G4DQ86XP0 818 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 NUP62CLQ9H1M0 184 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 CYP46A1Q9Y6A2 500 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 MRVI1Q9Y6F6 885 aa12.72□□□□□ -0.37
CHRNA1-201ENST00000261007 JCADQ9P266 1359 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 WNK3Q9BYP7 1800 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 ROBO1Q9Y6N7 1651 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 CAVIN2O95810 425 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 GJB2P29033 226 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 CDC25BP30305 580 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 KCNJ4P48050 445 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 TYRO3Q06418 890 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 NMIQ13287 307 aaPredicted RBP12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 CCDC186Q7Z3E2 898 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 CREBRFQ8IUR6 639 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 CCDC112Q8NEF3 446 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 KLHDC4Q8TBB5 520 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 HAUS7Q99871 368 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 ZSWIM6Q9HCJ5 1215 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 TLR7Q9NYK1 1049 aaKnown RBP12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 DBNLQ9UJU6 430 aaKnown RBP12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 ITGB4P16144 1822 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 SPEF2Q9C093 1822 aa12.71□□□□□ -0.37
CHRNA1-201ENST00000261007 SLFN14P0C7P3 912 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 ZNF75DP51815 510 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 KRT85P78386 507 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 KRT32Q14532 448 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 ANKRD1Q15327 319 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 ZSCAN25Q6NSZ9 544 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 RBM43Q6ZSC3 357 aaKnown RBP12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 TDRD7Q8NHU6 1098 aaKnown RBP12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 PLA2G12BQ9BX93 195 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 EYA2O00167 538 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 NEMFO60524 1076 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 PCCAP05165 728 aaPredicted RBP12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 CASTP20810 708 aaKnown RBP12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 TSGA10IPQ3SY00 556 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 PRPF40BQ6NWY9 871 aaKnown RBP12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 RASEFQ8IZ41 740 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 KIF18AQ8NI77 898 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 PIGBQ92521 554 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 ZBTB3Q9H5J0 574 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 PDRG1Q9NUG6 133 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 DDX19AQ9NUU7 478 aaKnown RBP12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 CHMP3Q9Y3E7 222 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 RBM8AQ9Y5S9 174 aaKnown RBP12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 BCL9O00512 1426 aa12.7□□□□□ -0.38
CHRNA1-201ENST00000261007 CCDC66A2RUB6 948 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms