RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 PKD1L3Q7Z443 1732 aa13.47□□□□□ -0.25
SLC3A1-201ENST00000260649 PTMAP06454 111 aaKnown RBP13.47□□□□□ -0.25
SLC3A1-201ENST00000260649 CCT2P78371 535 aaKnown RBP13.47□□□□□ -0.25
SLC3A1-201ENST00000260649 CEBPZQ03701 1054 aaKnown RBP13.47□□□□□ -0.25
SLC3A1-201ENST00000260649 HLFQ16534 295 aa13.47□□□□□ -0.25
SLC3A1-201ENST00000260649 CAMK4Q16566 473 aa13.47□□□□□ -0.25
SLC3A1-201ENST00000260649 HAND2P61296 217 aa13.46□□□□□ -0.25
SLC3A1-201ENST00000260649 TCIRG1Q13488 830 aa13.46□□□□□ -0.25
SLC3A1-201ENST00000260649 WASHC4Q2M389 1173 aa13.46□□□□□ -0.25
SLC3A1-201ENST00000260649 CCDC183Q5T5S1 534 aa13.46□□□□□ -0.25
SLC3A1-201ENST00000260649 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.25
SLC3A1-201ENST00000260649 HMG20BQ9P0W2 317 aa13.46□□□□□ -0.25
SLC3A1-201ENST00000260649 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.25
SLC3A1-201ENST00000260649 ANKRD1Q15327 319 aa13.46□□□□□ -0.26
SLC3A1-201ENST00000260649 TTC39AQ5SRH9 613 aa13.46□□□□□ -0.26
SLC3A1-201ENST00000260649 ZSCAN30Q86W11 494 aa13.46□□□□□ -0.26
SLC3A1-201ENST00000260649 APOBRQ0VD83 1088 aa13.45□□□□□ -0.26
SLC3A1-201ENST00000260649 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
SLC3A1-201ENST00000260649 TTC6Q86TZ1 520 aa13.45□□□□□ -0.26
SLC3A1-201ENST00000260649 PHF14O94880 888 aa13.45□□□□□ -0.26
SLC3A1-201ENST00000260649 SCARF1Q14162 830 aa13.45□□□□□ -0.26
SLC3A1-201ENST00000260649 RAB11FIP4Q86YS3 637 aa13.45□□□□□ -0.26
SLC3A1-201ENST00000260649 NCOA5Q9HCD5 579 aaKnown RBP13.45□□□□□ -0.26
SLC3A1-201ENST00000260649 ATG3Q9NT62 314 aa13.45□□□□□ -0.26
SLC3A1-201ENST00000260649 USP25Q9UHP3 1055 aa13.45□□□□□ -0.26
SLC3A1-201ENST00000260649 TBC1D2BQ9UPU7 963 aa13.45□□□□□ -0.26
SLC3A1-201ENST00000260649 GLI3P10071 1580 aa13.45□□□□□ -0.26
SLC3A1-201ENST00000260649 USPL1Q5W0Q7 1092 aa13.44□□□□□ -0.26
SLC3A1-201ENST00000260649 XIRP1Q702N8 1843 aaKnown RBP13.44□□□□□ -0.26
SLC3A1-201ENST00000260649 KCPQ6ZWJ8 1503 aa13.44□□□□□ -0.26
SLC3A1-201ENST00000260649 M0R2C6 588 aa13.44□□□□□ -0.26
SLC3A1-201ENST00000260649 KRT32Q14532 448 aa13.44□□□□□ -0.26
SLC3A1-201ENST00000260649 TMEM87AQ8NBN3 555 aa13.44□□□□□ -0.26
SLC3A1-201ENST00000260649 XAGE2Q96GT9 111 aa13.44□□□□□ -0.26
SLC3A1-201ENST00000260649 GUCY1B3Q02153 619 aa13.44□□□□□ -0.26
SLC3A1-201ENST00000260649 GPHNQ9NQX3 736 aaPredicted RBP13.44□□□□□ -0.26
SLC3A1-201ENST00000260649 MAST3O60307 1309 aa13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 H3BQV1 296 aa13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 HSPD1P10809 573 aaKnown RBP13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 KRT85P78386 507 aa13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 IFIT5Q13325 482 aaKnown RBP13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 IFFO2Q5TF58 517 aa13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 FAM184AQ8NB25 1140 aa13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 OSBP2Q969R2 916 aa13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 ISCA1Q9BUE6 129 aa13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 GOLGA6L4A6NEF3 574 aa13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 LIG1P18858 919 aa13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 SCRN1Q12765 414 aa13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 CCDC158Q5M9N0 1113 aa13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 PDLIM2Q96JY6 352 aa13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 ZNF830Q96NB3 372 aaPredicted RBP13.43□□□□□ -0.26
SLC3A1-201ENST00000260649 RNF113AO15541 343 aaKnown RBP13.42□□□□□ -0.26
SLC3A1-201ENST00000260649 STARD3NLO95772 234 aa13.42□□□□□ -0.26
SLC3A1-201ENST00000260649 ZAP70P43403 619 aa13.42□□□□□ -0.26
SLC3A1-201ENST00000260649 HELBQ8NG08 1087 aaPredicted RBP13.42□□□□□ -0.26
SLC3A1-201ENST00000260649 GTF3C6Q969F1 213 aa13.42□□□□□ -0.26
SLC3A1-201ENST00000260649 GREM2Q9H772 168 aa13.42□□□□□ -0.26
SLC3A1-201ENST00000260649 ZBTB1Q9Y2K1 713 aa13.42□□□□□ -0.26
SLC3A1-201ENST00000260649 PDCP20941 246 aa13.42□□□□□ -0.26
SLC3A1-201ENST00000260649 METTL24Q5JXM2 366 aa13.42□□□□□ -0.26
SLC3A1-201ENST00000260649 CKAP2LQ8IYA6 745 aa13.42□□□□□ -0.26
SLC3A1-201ENST00000260649 SPATA32Q96LK8 384 aa13.42□□□□□ -0.26
SLC3A1-201ENST00000260649 SLC4A9Q96Q91 983 aa13.42□□□□□ -0.26
SLC3A1-201ENST00000260649 TSGA10IPQ3SY00 556 aa13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 ZMYM1Q5SVZ6 1142 aa13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 LDHAL6AQ6ZMR3 332 aa13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 CNNM1Q9NRU3 951 aa13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 PARP4Q9UKK3 1724 aaKnown RBP13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 E7EWF7 191 aa13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 CSPP1Q1MSJ5 1256 aa13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 SH3TC1Q8TE82 1336 aa13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 LAMB4A4D0S4 1761 aa13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 KDM4AO75164 1064 aa13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 ITGA6P23229 1130 aa13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 FTOQ9C0B1 505 aaKnown RBP eCLIP13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 HELLSQ9NRZ9 838 aa13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.41□□□□□ -0.26
SLC3A1-201ENST00000260649 JCADQ9P266 1359 aa13.4□□□□□ -0.26
SLC3A1-201ENST00000260649 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
SLC3A1-201ENST00000260649 SNAP23O00161 211 aa13.4□□□□□ -0.26
SLC3A1-201ENST00000260649 ADAMTS2O95450 1211 aa13.4□□□□□ -0.26
SLC3A1-201ENST00000260649 DHX32Q7L7V1 743 aaKnown RBP13.4□□□□□ -0.26
SLC3A1-201ENST00000260649 ACSBG1Q96GR2 724 aa13.4□□□□□ -0.26
SLC3A1-201ENST00000260649 DNAJC5Q9H3Z4 198 aa13.4□□□□□ -0.26
SLC3A1-201ENST00000260649 ABCC6O95255 1503 aa13.39□□□□□ -0.27
SLC3A1-201ENST00000260649 PCCAP05165 728 aaPredicted RBP13.39□□□□□ -0.27
SLC3A1-201ENST00000260649 ZBTB38Q8NAP3 1195 aaPredicted RBP13.39□□□□□ -0.27
SLC3A1-201ENST00000260649 BICD2Q8TD16 824 aa13.39□□□□□ -0.27
SLC3A1-201ENST00000260649 PUS7LQ9H0K6 701 aaKnown RBP13.39□□□□□ -0.27
SLC3A1-201ENST00000260649 GPR108Q9NPR9 543 aa13.39□□□□□ -0.27
SLC3A1-201ENST00000260649 DACT1Q9NYF0 836 aa13.39□□□□□ -0.27
SLC3A1-201ENST00000260649 ATP2B3Q16720 1220 aa13.39□□□□□ -0.27
SLC3A1-201ENST00000260649 MAP3K15Q6ZN16 1313 aa13.39□□□□□ -0.27
SLC3A1-201ENST00000260649 PALLDQ8WX93 1383 aa13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 IRS4O14654 1257 aaPredicted RBP13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 CIAO1O76071 339 aa13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 ADCY5O95622 1261 aa13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 GIGYF2Q6Y7W6 1299 aaKnown RBP13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 NLRP10Q86W26 655 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms