RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 CALM2P0DP24 149 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 CALM3P0DP25 149 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 CNGA1P29973 690 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 KIAA0825Q8IV33 1275 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 TESK2Q96S53 571 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 NAT10Q9H0A0 1025 aaKnown RBP7.41□□□□□ -1.22
BRIP1-201ENST00000259008 THRAP3Q9Y2W1 955 aaKnown RBP7.41□□□□□ -1.22
BRIP1-201ENST00000259008 IL16Q14005 1332 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 ABCC3O15438 1527 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 SMC2O95347 1197 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 WTAPQ15007 396 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 PUM3Q15397 648 aaKnown RBP7.41□□□□□ -1.22
BRIP1-201ENST00000259008 G2E3Q7L622 706 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 NCOA7Q8NI08 942 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 BICD1Q96G01 975 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 SLC26A6Q9BXS9 759 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 EP400NLQ6ZTU2 488 aa7.4□□□□□ -1.22
BRIP1-201ENST00000259008 CCDC191Q8NCU4 936 aa7.4□□□□□ -1.22
BRIP1-201ENST00000259008 CCDC12Q8WUD4 166 aaPredicted RBP7.4□□□□□ -1.22
BRIP1-201ENST00000259008 HOMER2Q9NSB8 354 aa7.4□□□□□ -1.22
BRIP1-201ENST00000259008 CEP131Q9UPN4 1083 aa7.4□□□□□ -1.22
BRIP1-201ENST00000259008 MAST3O60307 1309 aa7.4□□□□□ -1.22
BRIP1-201ENST00000259008 MCM2P49736 904 aa7.4□□□□□ -1.22
BRIP1-201ENST00000259008 IRX3P78415 501 aaPredicted RBP7.4□□□□□ -1.22
BRIP1-201ENST00000259008 UPF3BQ9BZI7 483 aaKnown RBP7.4□□□□□ -1.22
BRIP1-201ENST00000259008 TTF2Q9UNY4 1162 aaKnown RBP7.4□□□□□ -1.22
BRIP1-201ENST00000259008 SPATA31A3Q5VYP0 1347 aa7.4□□□□□ -1.22
BRIP1-201ENST00000259008 CLASP1Q7Z460 1538 aa7.4□□□□□ -1.22
BRIP1-201ENST00000259008 MMP10P09238 476 aa7.4□□□□□ -1.23
BRIP1-201ENST00000259008 PUS7Q96PZ0 661 aaKnown RBP7.4□□□□□ -1.23
BRIP1-201ENST00000259008 METAP2P50579 478 aaKnown RBP eCLIP7.4□□□□□ -1.23
BRIP1-201ENST00000259008 ERFEQ4G0M1 354 aa7.4□□□□□ -1.23
BRIP1-201ENST00000259008 TTLL7Q6ZT98 887 aa7.4□□□□□ -1.23
BRIP1-201ENST00000259008 LRRC2Q9BYS8 371 aa7.4□□□□□ -1.23
BRIP1-201ENST00000259008 DBNDD1Q9H9R9 158 aa7.4□□□□□ -1.23
BRIP1-201ENST00000259008 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.4□□□□□ -1.23
BRIP1-201ENST00000259008 GPCPD1Q9NPB8 672 aa7.4□□□□□ -1.23
BRIP1-201ENST00000259008 CHMP5Q9NZZ3 219 aa7.4□□□□□ -1.23
BRIP1-201ENST00000259008 MBD5Q9P267 1494 aa7.4□□□□□ -1.23
BRIP1-201ENST00000259008 PLXNC1O60486 1568 aa7.4□□□□□ -1.23
BRIP1-201ENST00000259008 ESR2Q92731 530 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 HOOK2Q96ED9 719 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 GPHNQ9NQX3 736 aaPredicted RBP7.39□□□□□ -1.23
BRIP1-201ENST00000259008 PTPRMP28827 1452 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 KDM5AP29375 1690 aaKnown RBP7.39□□□□□ -1.23
BRIP1-201ENST00000259008 POLR3AO14802 1390 aaPredicted RBP7.39□□□□□ -1.23
BRIP1-201ENST00000259008 FNBP4Q8N3X1 1017 aaPredicted RBP7.39□□□□□ -1.23
BRIP1-201ENST00000259008 KRT23Q9C075 422 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 CAMSAP1Q5T5Y3 1602 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 B4DLN1 442 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 C21orf2O43822 256 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 RAD17O75943 681 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 MRPL12P52815 198 aaKnown RBP7.39□□□□□ -1.23
BRIP1-201ENST00000259008 SKOR2Q2VWA4 1001 aaPredicted RBP7.39□□□□□ -1.23
BRIP1-201ENST00000259008 ZKSCAN3Q9BRR0 538 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 ARHGEF10LQ9HCE6 1279 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 CLRN2A0PK11 232 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 TIMM10P62072 90 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 TTC6Q86TZ1 520 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 C8orf76Q96K31 380 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 ZSCAN31Q96LW9 406 aaPredicted RBP7.39□□□□□ -1.23
BRIP1-201ENST00000259008 SPON1Q9HCB6 807 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 RNF181Q9P0P0 153 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 CCDC39Q9UFE4 941 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 PTPDC1A2A3K4 754 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 SSR1P43307 286 aaKnown RBP7.39□□□□□ -1.23
BRIP1-201ENST00000259008 FILIP1LQ4L180 1135 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 ARHGEF25Q86VW2 580 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 SH2D4AQ9H788 454 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 ARMT1Q9H993 441 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 USP40Q9NVE5 1235 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 PIM2Q9P1W9 311 aa7.39□□□□□ -1.23
BRIP1-201ENST00000259008 PALLDQ8WX93 1383 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 PRPF40AO75400 957 aaKnown RBP7.38□□□□□ -1.23
BRIP1-201ENST00000259008 MBD4O95243 580 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 HMGB1P09429 215 aaKnown RBP7.38□□□□□ -1.23
BRIP1-201ENST00000259008 NAPAP54920 295 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 RPS8P62241 208 aaKnown RBP7.38□□□□□ -1.23
BRIP1-201ENST00000259008 PPP4R3BQ5MIZ7 849 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 MFSD14BQ5SR56 506 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 FERMT3Q86UX7 667 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 MAPKAPK5Q8IW41 473 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 USP16Q9Y5T5 823 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 CTSWP56202 376 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 CCDC70Q6NSX1 233 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 SKAP1Q86WV1 359 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 TGFBRAP1Q8WUH2 860 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 XAGE2Q96GT9 111 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 SPATA32Q96LK8 384 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 RAB34Q9BZG1 259 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 DNAI2Q9GZS0 605 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 ZBTB1Q9Y2K1 713 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 A0A1B0GUL7 405 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 CCDC174Q6PII3 467 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 CPXCR1Q8N123 301 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 CDC42BPGQ6DT37 1551 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 USP19O94966 1318 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 CHST3Q7LGC8 479 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 USP48Q86UV5 1035 aa7.38□□□□□ -1.23
BRIP1-201ENST00000259008 VSIG10Q8N0Z9 540 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms