RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
LIMD2-201ENST00000259006 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
LIMD2-201ENST00000259006 BRF1Q92994 677 aa16.3■□□□□ 0.2
LIMD2-201ENST00000259006 NECTIN1Q15223 517 aa16.3■□□□□ 0.2
LIMD2-201ENST00000259006 ELF2Q15723 593 aa16.3■□□□□ 0.2
LIMD2-201ENST00000259006 ZNF589Q86UQ0 364 aaPredicted RBP16.3■□□□□ 0.2
LIMD2-201ENST00000259006 SMTNL1A8MU46 457 aa16.3■□□□□ 0.2
LIMD2-201ENST00000259006 SKILP12757 684 aa16.3■□□□□ 0.2
LIMD2-201ENST00000259006 POLA2Q14181 598 aa16.3■□□□□ 0.2
LIMD2-201ENST00000259006 MAP3K2Q9Y2U5 619 aa16.3■□□□□ 0.2
LIMD2-201ENST00000259006 PROSER3Q2NL68 480 aa16.29■□□□□ 0.2
LIMD2-201ENST00000259006 ISM2Q6H9L7 571 aa16.29■□□□□ 0.2
LIMD2-201ENST00000259006 SLFNL1Q499Z3 407 aa16.29■□□□□ 0.2
LIMD2-201ENST00000259006 EAF2Q96CJ1 260 aaPredicted RBP16.29■□□□□ 0.2
LIMD2-201ENST00000259006 BRMS1Q9HCU9 246 aa16.29■□□□□ 0.2
LIMD2-201ENST00000259006 CCT2P78371 535 aaKnown RBP16.28■□□□□ 0.2
LIMD2-201ENST00000259006 PTPN14Q15678 1187 aa16.28■□□□□ 0.2
LIMD2-201ENST00000259006 PTPN21Q16825 1174 aa16.28■□□□□ 0.2
LIMD2-201ENST00000259006 BEND3Q5T5X7 828 aa16.28■□□□□ 0.2
LIMD2-201ENST00000259006 GOLGA6L1Q8N7Z2 621 aa16.28■□□□□ 0.2
LIMD2-201ENST00000259006 CEP170BQ9Y4F5 1589 aaPredicted RBP16.28■□□□□ 0.2
LIMD2-201ENST00000259006 GPATCH3Q96I76 525 aa16.28■□□□□ 0.2
LIMD2-201ENST00000259006 SEC62Q99442 399 aaKnown RBP16.28■□□□□ 0.2
LIMD2-201ENST00000259006 CXorf56Q9H5V9 222 aa16.28■□□□□ 0.2
LIMD2-201ENST00000259006 SUFUQ9UMX1 484 aa16.28■□□□□ 0.2
LIMD2-201ENST00000259006 SETD1BQ9UPS6 1966 aaKnown RBP16.28■□□□□ 0.2
LIMD2-201ENST00000259006 SEMA3FQ13275 785 aa16.28■□□□□ 0.2
LIMD2-201ENST00000259006 CHST3Q7LGC8 479 aa16.28■□□□□ 0.2
LIMD2-201ENST00000259006 SCAND2PQ9GZW5 306 aaPredicted RBP16.28■□□□□ 0.2
LIMD2-201ENST00000259006 AOX1Q06278 1338 aa16.27■□□□□ 0.2
LIMD2-201ENST00000259006 PIP4K2AP48426 406 aaPredicted RBP16.27■□□□□ 0.2
LIMD2-201ENST00000259006 CLSTN2Q9H4D0 955 aa16.27■□□□□ 0.2
LIMD2-201ENST00000259006 DEF6Q9H4E7 631 aa16.27■□□□□ 0.2
LIMD2-201ENST00000259006 CCDC69A6NI79 296 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 BIN1O00499 593 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 G3BP1Q13283 466 aaKnown RBP eCLIP16.26■□□□□ 0.19
LIMD2-201ENST00000259006 TOB2Q14106 344 aaPredicted RBP16.26■□□□□ 0.19
LIMD2-201ENST00000259006 ORAI2Q96SN7 254 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 PDCP20941 246 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 TEFQ10587 303 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 HSP90AB3PQ58FF7 597 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 LRRC8AQ8IWT6 810 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 ABTB2Q8N961 1025 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 EVI5LQ96CN4 794 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 NPHP3Q7Z494 1330 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 SYCP1Q15431 976 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 ZSCAN26Q16670 478 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
LIMD2-201ENST00000259006 PSMA5P28066 241 aa16.25■□□□□ 0.19
LIMD2-201ENST00000259006 PSME1Q06323 249 aa16.25■□□□□ 0.19
LIMD2-201ENST00000259006 TTC31Q49AM3 519 aaPredicted RBP16.25■□□□□ 0.19
LIMD2-201ENST00000259006 RAB11FIP4Q86YS3 637 aa16.25■□□□□ 0.19
LIMD2-201ENST00000259006 CCAR1Q8IX12 1150 aaKnown RBP16.25■□□□□ 0.19
LIMD2-201ENST00000259006 DDX17Q92841 729 aaKnown RBP16.25■□□□□ 0.19
LIMD2-201ENST00000259006 DDX19AQ9NUU7 478 aaKnown RBP16.25■□□□□ 0.19
LIMD2-201ENST00000259006 HSP90AB4PQ58FF6 505 aa16.25■□□□□ 0.19
LIMD2-201ENST00000259006 Q6ZUG5 572 aa16.25■□□□□ 0.19
LIMD2-201ENST00000259006 ARHGAP23Q9P227 1491 aa16.25■□□□□ 0.19
LIMD2-201ENST00000259006 ST5P78524 1137 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 BMS1Q14692 1282 aaKnown RBP16.24■□□□□ 0.19
LIMD2-201ENST00000259006 AOPEPQ8N6M6 819 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 NCOA5Q9HCD5 579 aaKnown RBP16.24■□□□□ 0.19
LIMD2-201ENST00000259006 DONSONQ9NYP3 566 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 SASH1O94885 1247 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 RPS6KB1P23443 525 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 TEX35Q5T0J7 233 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 PACS2Q86VP3 889 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 FAM177A1Q8N128 213 aaPredicted RBP16.24■□□□□ 0.19
LIMD2-201ENST00000259006 LRRN4CLQ8ND94 238 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 MAP4K1Q92918 833 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 SGSM3Q96HU1 749 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 DLC1Q96QB1 1528 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 KDM4FA0A1W2PPD8 638 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 BTBD11A6QL63 1104 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 ME1P48163 572 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 LRRC59Q96AG4 307 aaKnown RBP16.24■□□□□ 0.19
LIMD2-201ENST00000259006 RRP15Q9Y3B9 282 aaKnown RBP16.24■□□□□ 0.19
LIMD2-201ENST00000259006 FLT4P35916 1363 aa16.24■□□□□ 0.19
LIMD2-201ENST00000259006 MYL6BP14649 208 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 TSGA10IPQ3SY00 556 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 RNF20Q5VTR2 975 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 OTUD7BQ6GQQ9 843 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 CREBRFQ8IUR6 639 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 TXLNBQ8N3L3 684 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 BICC1Q9H694 974 aaKnown RBP16.23■□□□□ 0.19
LIMD2-201ENST00000259006 SLIT1O75093 1534 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 A0A1B0GUL7 405 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 SMC2O95347 1197 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 HOXC9P31274 260 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 ERCC6LQ2NKX8 1250 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 TDRD7Q8NHU6 1098 aaKnown RBP16.23■□□□□ 0.19
LIMD2-201ENST00000259006 TTC41PQ6P2S7 1318 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 IGSF1Q8N6C5 1336 aa16.23■□□□□ 0.19
LIMD2-201ENST00000259006 SETD1AO15047 1707 aaKnown RBP16.22■□□□□ 0.19
LIMD2-201ENST00000259006 IL17RAQ96F46 866 aa16.22■□□□□ 0.19
LIMD2-201ENST00000259006 SUCLG2Q96I99 432 aa16.22■□□□□ 0.19
LIMD2-201ENST00000259006 GOLPH3LQ9H4A5 285 aa16.22■□□□□ 0.19
LIMD2-201ENST00000259006 PAXBP1Q9Y5B6 917 aa16.22■□□□□ 0.19
LIMD2-201ENST00000259006 EIF4A1P60842 406 aaKnown RBP16.22■□□□□ 0.19
LIMD2-201ENST00000259006 SMARCE1Q969G3 411 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms