RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 CCDC6Q16204 474 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 TUBB8Q3ZCM7 444 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 TUBB2BQ9BVA1 445 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 AFDNP55196 1824 aaKnown RBP5.46□□□□□ -1.54
RC3H1-201ENST00000258349 PABPN1LA6NDY0 278 aaKnown RBP5.46□□□□□ -1.54
RC3H1-201ENST00000258349 EBAG9O00559 213 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 ATL3Q6DD88 541 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 PROSER2Q86WR7 435 aaPredicted RBP5.46□□□□□ -1.54
RC3H1-201ENST00000258349 SYNCQ9H7C4 482 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 KRT86O43790 486 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 BAG3O95817 575 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 CWC25Q9NXE8 425 aaPredicted RBP5.46□□□□□ -1.54
RC3H1-201ENST00000258349 CNPY2Q9Y2B0 182 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC61Q9Y6R9 512 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 NOL3O60936 208 aaKnown RBP5.46□□□□□ -1.54
RC3H1-201ENST00000258349 SLU7O95391 586 aaKnown RBP5.46□□□□□ -1.54
RC3H1-201ENST00000258349 HCLS1P14317 486 aaPredicted RBP5.46□□□□□ -1.54
RC3H1-201ENST00000258349 IRX3P78415 501 aaPredicted RBP5.46□□□□□ -1.54
RC3H1-201ENST00000258349 SEPT6Q14141 434 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 SCLT1Q96NL6 688 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 ANAPC4Q9UJX5 808 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 FANCAO15360 1455 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 CYB5RLQ6IPT4 315 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 FAM76AQ8TAV0 307 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 NUDT16Q96DE0 195 aaKnown RBP5.46□□□□□ -1.54
RC3H1-201ENST00000258349 ZFYP08048 801 aaPredicted RBP5.46□□□□□ -1.54
RC3H1-201ENST00000258349 IARSP41252 1262 aaKnown RBP5.46□□□□□ -1.54
RC3H1-201ENST00000258349 TYRO3Q06418 890 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 NBPF11Q86T75 865 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 NAP1L3Q99457 506 aaPredicted RBP5.46□□□□□ -1.54
RC3H1-201ENST00000258349 MYD88Q99836 296 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 KAT14Q9H8E8 782 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 OGFRQ9NZT2 677 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC14Q49A88 953 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 USP48Q86UV5 1035 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 TMTC2Q8N394 836 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 AFAP1Q8N556 730 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 DDX54Q8TDD1 881 aaKnown RBP5.45□□□□□ -1.54
RC3H1-201ENST00000258349 RPGRQ92834 1020 aaKnown RBP5.45□□□□□ -1.54
RC3H1-201ENST00000258349 DISP3Q9P2K9 1392 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 CHD4Q14839 1912 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 MCM6Q14566 821 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 MRPS27Q92552 414 aaKnown RBP5.45□□□□□ -1.54
RC3H1-201ENST00000258349 ARHGAP45Q92619 1136 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 ZFP91Q96JP5 570 aaPredicted RBP5.45□□□□□ -1.54
RC3H1-201ENST00000258349 RSPH14Q9UHP6 348 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 SSX2IPQ9Y2D8 614 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 IFT74Q96LB3 600 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 PRDM11Q9NQV5 511 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 MIS18AQ9NYP9 233 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 USP16Q9Y5T5 823 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 ATP2A2P16615 1042 aaKnown RBP5.45□□□□□ -1.54
RC3H1-201ENST00000258349 GBP1P32455 592 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 MXRA7P84157 204 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC174Q6PII3 467 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 PRAG1Q86YV5 1406 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 ZGPATQ8N5A5 531 aaKnown RBP5.45□□□□□ -1.54
RC3H1-201ENST00000258349 NEK1Q96PY6 1258 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 SMC6Q96SB8 1091 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 MAP3K2Q9Y2U5 619 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 CAPN2P17655 700 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 MICU3Q86XE3 530 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 FBF1Q8TES7 1133 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 ANKRD24Q8TF21 1146 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 CPLX3Q8WVH0 158 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 ZKSCAN5Q9Y2L8 839 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 COMMD10Q9Y6G5 202 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 ALDH3A1P30838 453 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 ATP11AP98196 1134 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 FLIIQ13045 1269 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 OTUD6BQ8N6M0 293 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 PAIP2Q9BPZ3 127 aaKnown RBP5.45□□□□□ -1.54
RC3H1-201ENST00000258349 SAMD15Q9P1V8 674 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 GUCY1B3Q02153 619 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 ANKLE2Q86XL3 938 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 SLC26A6Q9BXS9 759 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 RAB3GAP1Q15042 981 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 AKR1B10O60218 316 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 RTN1Q16799 776 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 GIMAP6Q6P9H5 292 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 BRAPQ7Z569 592 aa5.45□□□□□ -1.54
RC3H1-201ENST00000258349 CPSF2Q9P2I0 782 aaKnown RBP5.45□□□□□ -1.54
RC3H1-201ENST00000258349 ORC3Q9UBD5 711 aaPredicted RBP5.45□□□□□ -1.54
RC3H1-201ENST00000258349 NOS1P29475 1434 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 KDM5CP41229 1560 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 URB2Q14146 1524 aaKnown RBP5.44□□□□□ -1.54
RC3H1-201ENST00000258349 CHD1O14646 1710 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 PSMA7O14818 248 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 PRC1O43663 620 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 TCERG1LQ5VWI1 586 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 CNGA4Q8IV77 575 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 DRC1Q96MC2 740 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 CLUL1Q15846 466 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.44□□□□□ -1.54
RC3H1-201ENST00000258349 CDC5LQ99459 802 aaKnown RBP5.44□□□□□ -1.54
RC3H1-201ENST00000258349 CRNKL1Q9BZJ0 848 aaKnown RBP5.44□□□□□ -1.54
RC3H1-201ENST00000258349 MYO1BO43795 1136 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 LACTBP83111 547 aaPredicted RBP5.44□□□□□ -1.54
RC3H1-201ENST00000258349 WTAPQ15007 396 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 BICDL1Q6ZP65 573 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms