RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 MEIS3Q99687 375 aa12.52□□□□□ -0.41
URB2-201ENST00000258243 CNNM2Q9H8M5 875 aa12.52□□□□□ -0.41
URB2-201ENST00000258243 SAMD9Q5K651 1589 aa12.52□□□□□ -0.41
URB2-201ENST00000258243 NEBLO76041 1014 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 ESR2Q92731 530 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 UBA5Q9GZZ9 404 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 SLC52A2Q9HAB3 445 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 USP25Q9UHP3 1055 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 MCM5P33992 734 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 UPF3BQ9BZI7 483 aaKnown RBP12.51□□□□□ -0.41
URB2-201ENST00000258243 CPSF2Q9P2I0 782 aaKnown RBP12.51□□□□□ -0.41
URB2-201ENST00000258243 SAMM50Q9Y512 469 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 IARSP41252 1262 aaKnown RBP12.51□□□□□ -0.41
URB2-201ENST00000258243 CCDC150Q8NCX0 1101 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 PLBD2Q8NHP8 589 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
URB2-201ENST00000258243 DYNC1I1O14576 645 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 ATP8B2P98198 1209 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 KLHL40Q2TBA0 621 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 METAP2P50579 478 aaKnown RBP eCLIP12.51□□□□□ -0.41
URB2-201ENST00000258243 WTAPQ15007 396 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 MAP3K11Q16584 847 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 SLC9C2Q5TAH2 1124 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 BABAM1Q9NWV8 329 aa12.51□□□□□ -0.41
URB2-201ENST00000258243 PLEKHG1Q9ULL1 1385 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 ANKRD62A6NC57 917 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 KIF20AO95235 890 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 GNAT2P19087 354 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 GBP2P32456 591 aaPredicted RBP12.5□□□□□ -0.41
URB2-201ENST00000258243 CCDC183Q5T5S1 534 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 HELBQ8NG08 1087 aaPredicted RBP12.5□□□□□ -0.41
URB2-201ENST00000258243 GGA1Q9UJY5 639 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 SH3TC1Q8TE82 1336 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 IFIT1BQ5T764 474 aaKnown RBP12.5□□□□□ -0.41
URB2-201ENST00000258243 CCDC144CPQ8IYA2 1237 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 USP16Q9Y5T5 823 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 EFCAB6Q5THR3 1501 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 CCT2P78371 535 aaKnown RBP12.5□□□□□ -0.41
URB2-201ENST00000258243 CWF19L2Q2TBE0 894 aaKnown RBP12.5□□□□□ -0.41
URB2-201ENST00000258243 NEK1Q96PY6 1258 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 KDM5DQ9BY66 1539 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 UGGT1Q9NYU2 1555 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 LIG1P18858 919 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 PLS1Q14651 629 aa12.5□□□□□ -0.41
URB2-201ENST00000258243 FAM177A1Q8N128 213 aaPredicted RBP12.5□□□□□ -0.41
URB2-201ENST00000258243 PZPP20742 1482 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 TESK2Q96S53 571 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 DENND2AQ9ULE3 1009 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 CHD1O14646 1710 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 TMTC2Q8N394 836 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 CALML4Q96GE6 196 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 GPR162Q16538 588 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 SKIDA1Q1XH10 827 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 DPP8Q6V1X1 898 aaPredicted RBP12.49□□□□□ -0.41
URB2-201ENST00000258243 MICU3Q86XE3 530 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 CARD14Q9BXL6 1004 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 LIMCH1Q9UPQ0 1083 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 PDE6BP35913 854 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 GNAQP50148 359 aa12.49□□□□□ -0.41
URB2-201ENST00000258243 POLR3GO15318 223 aaPredicted RBP12.48□□□□□ -0.41
URB2-201ENST00000258243 GUCY1B3Q02153 619 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 SMTNL1A8MU46 457 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 CAMK4Q16566 473 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 PAG1Q9NWQ8 432 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 ERVV-2B6SEH9 535 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 PDE8AO60658 829 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 STAMBPO95630 424 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 TCP11L1Q9NUJ3 509 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 RBM27Q9P2N5 1060 aaKnown RBP12.48□□□□□ -0.41
URB2-201ENST00000258243 MAST3O60307 1309 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 ALDH1B1P30837 517 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 SARNPP82979 210 aaKnown RBP12.48□□□□□ -0.41
URB2-201ENST00000258243 EIF5P55010 431 aaKnown RBP12.48□□□□□ -0.41
URB2-201ENST00000258243 FERMT3Q86UX7 667 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 PHACTR3Q96KR7 559 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 SLC26A6Q9BXS9 759 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 ARHGEF5Q12774 1597 aa12.48□□□□□ -0.41
URB2-201ENST00000258243 MCMDC2Q4G0Z9 681 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 TTC22Q5TAA0 569 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 STXBP4Q6ZWJ1 553 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 DHX37Q8IY37 1157 aaKnown RBP12.47□□□□□ -0.41
URB2-201ENST00000258243 CGNQ9P2M7 1197 aaKnown RBP12.47□□□□□ -0.41
URB2-201ENST00000258243 ZSCAN23Q3MJ62 389 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 UBXN4Q92575 508 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 BEGAINQ9BUH8 593 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 MCM9Q9NXL9 1143 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 FAM184BQ9ULE4 1060 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 ABCA8O94911 1581 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 FGFR1OPO95684 399 aaKnown RBP12.47□□□□□ -0.41
URB2-201ENST00000258243 IL13P35225 146 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 PTPN14Q15678 1187 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 TSHZ3Q63HK5 1081 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 MAGEB6Q8N7X4 407 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 HOOK2Q96ED9 719 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 SH2D4AQ9H788 454 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 ZNF408Q9H9D4 720 aa12.47□□□□□ -0.41
URB2-201ENST00000258243 PA2G4Q9UQ80 394 aaKnown RBP12.47□□□□□ -0.41
URB2-201ENST00000258243 CCDC148Q8NFR7 591 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms