RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 PROSER3Q2NL68 480 aa11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 STRN4Q9NRL3 753 aa11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 PAG1Q9NWQ8 432 aa11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 ZNF75DP51815 510 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 TNNI3KQ59H18 835 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 METTL24Q5JXM2 366 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 FPGT-TNNI3KV9GXZ4 949 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 KLF18A0A0U1RQI7 1052 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 TRIM22Q8IYM9 498 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 PRDM11Q9NQV5 511 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 DLC1Q96QB1 1528 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 KDRP35968 1356 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 TSPOAP1O95153 1857 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 ZNF790Q6PG37 636 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 ANKRD20A12PQ8NF67 263 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 PLEKHG1Q9ULL1 1385 aa11.73□□□□□ -0.53
SEMA6A-201ENST00000257414 CCDC69A6NI79 296 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 GTF2E1P29083 439 aaPredicted RBP11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 GPS2Q13227 327 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 SNW1Q13573 536 aaKnown RBP11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 CHRNA2Q15822 529 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 CDC42BPGQ6DT37 1551 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 TMEM87AQ8NBN3 555 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 UBXN4Q92575 508 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 MAP4K1Q92918 833 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 PYCARDQ9ULZ3 195 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 V9GYY5 206 aaPredicted RBP11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 KIF20BQ96Q89 1820 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 GCKRQ14397 625 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 GOLGA6L1Q8N7Z2 621 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 IFT172Q9UG01 1749 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 METTL22Q9BUU2 404 aaPredicted RBP11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 BCL2L12Q9HB09 334 aa11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 TLR7Q9NYK1 1049 aaKnown RBP11.72□□□□□ -0.53
SEMA6A-201ENST00000257414 CCDC66A2RUB6 948 aa11.71□□□□□ -0.53
SEMA6A-201ENST00000257414 NCOA5Q9HCD5 579 aaKnown RBP11.71□□□□□ -0.53
SEMA6A-201ENST00000257414 NR1I2O75469 434 aa11.71□□□□□ -0.54
SEMA6A-201ENST00000257414 XBP1P17861 261 aa11.71□□□□□ -0.54
SEMA6A-201ENST00000257414 IL15P40933 162 aaPredicted RBP11.71□□□□□ -0.54
SEMA6A-201ENST00000257414 LRMPQ12912 555 aa11.71□□□□□ -0.54
SEMA6A-201ENST00000257414 TTLL5Q6EMB2 1281 aa11.71□□□□□ -0.54
SEMA6A-201ENST00000257414 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.71□□□□□ -0.54
SEMA6A-201ENST00000257414 IFIT5Q13325 482 aaKnown RBP11.71□□□□□ -0.54
SEMA6A-201ENST00000257414 KCNG4Q8TDN1 519 aa11.71□□□□□ -0.54
SEMA6A-201ENST00000257414 NUP133Q8WUM0 1156 aa11.71□□□□□ -0.54
SEMA6A-201ENST00000257414 GTF3C6Q969F1 213 aa11.71□□□□□ -0.54
SEMA6A-201ENST00000257414 TTC14Q96N46 770 aa11.71□□□□□ -0.54
SEMA6A-201ENST00000257414 URI1O94763 535 aaPredicted RBP11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 TIMM10P62072 90 aa11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 SMAP1Q8IYB5 467 aaPredicted RBP11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 NCOA7Q8NI08 942 aa11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 AIDAQ96BJ3 306 aa11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 PREX1Q8TCU6 1659 aa11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 TOP1P11387 765 aaKnown RBP11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 TNNT3P45378 269 aaPredicted RBP11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 FAM160A1Q05DH4 1040 aa11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 MICU3Q86XE3 530 aa11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 VPS37DQ86XT2 251 aa11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 CCDC144CPQ8IYA2 1237 aa11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 IL25Q9H293 177 aa11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 DACH1Q9UI36 760 aa11.7□□□□□ -0.54
SEMA6A-201ENST00000257414 A0A1B0GVL5 298 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 NEURL1BA8MQ27 555 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 CCDC150Q8NCX0 1101 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 SEC62Q99442 399 aaKnown RBP11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 SPTLC2O15270 562 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 ATP5JP18859 108 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 TDO2P48775 406 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 NECTIN1Q15223 517 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 NACAP1Q9BZK3 213 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 MRVI1Q9Y6F6 885 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 TMEM131LA2VDJ0 1609 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 RNF113AO15541 343 aaKnown RBP11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 PRC1O43663 620 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 FILIP1LQ4L180 1135 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 CCDC82Q8N4S0 544 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 KBTBD3Q8NAB2 608 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 CNNM3Q8NE01 707 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 ORAI2Q96SN7 254 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 LLPHQ9BRT6 129 aaKnown RBP11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 BRMS1Q9HCU9 246 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 IGSF3O75054 1194 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 U2AF2P26368 475 aaKnown RBP eCLIP11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 LMOD1P29536 600 aaPredicted RBP11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 MARCKSP29966 332 aaPredicted RBP11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 HSP90AB3PQ58FF7 597 aa11.69□□□□□ -0.54
SEMA6A-201ENST00000257414 OVOS2A0A0J9YW53 1432 aa11.68□□□□□ -0.54
SEMA6A-201ENST00000257414 OVOS2Q6IE36 1432 aa11.68□□□□□ -0.54
SEMA6A-201ENST00000257414 ERICH4A6NGS2 130 aa11.68□□□□□ -0.54
SEMA6A-201ENST00000257414 SYKP43405 635 aa11.68□□□□□ -0.54
SEMA6A-201ENST00000257414 METAP2P50579 478 aaKnown RBP eCLIP11.68□□□□□ -0.54
SEMA6A-201ENST00000257414 ZNF589Q86UQ0 364 aaPredicted RBP11.68□□□□□ -0.54
SEMA6A-201ENST00000257414 PPFIBP1Q86W92 1011 aa11.68□□□□□ -0.54
SEMA6A-201ENST00000257414 ZNF496Q96IT1 587 aaPredicted RBP11.68□□□□□ -0.54
SEMA6A-201ENST00000257414 GOLGA8AA7E2F4 631 aa11.68□□□□□ -0.54
SEMA6A-201ENST00000257414 TMCO3Q6UWJ1 677 aa11.68□□□□□ -0.54
SEMA6A-201ENST00000257414 KIAA1524Q8TCG1 905 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms