RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 CABS1Q96KC9 395 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 PRAM1Q96QH2 718 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 GUCA1BQ9UMX6 200 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 ZMYM3Q14202 1370 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 ASXL1Q8IXJ9 1541 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 EIF3CLB5ME19 914 aaKnown RBP11.64□□□□□ -0.55
TRPM1-201ENST00000256552 RRS1Q15050 365 aaKnown RBP11.64□□□□□ -0.55
TRPM1-201ENST00000256552 MUM1L1Q5H9M0 696 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 CPLX4Q7Z7G2 160 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 EIF3CQ99613 913 aaKnown RBP11.64□□□□□ -0.55
TRPM1-201ENST00000256552 IMPACTQ9P2X3 320 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 DESP17661 470 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 CCDC6Q16204 474 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 ECHDC1Q9NTX5 307 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 GOLGA8BA8MQT2 603 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 PER1O15534 1290 aaPredicted RBP11.63□□□□□ -0.55
TRPM1-201ENST00000256552 BUB1BO60566 1050 aaPredicted RBP11.63□□□□□ -0.55
TRPM1-201ENST00000256552 MPHOSPH8Q99549 860 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 NSRP1Q9H0G5 558 aaKnown RBP11.63□□□□□ -0.55
TRPM1-201ENST00000256552 BLMP54132 1417 aaPredicted RBP11.63□□□□□ -0.55
TRPM1-201ENST00000256552 SLFNL1Q499Z3 407 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 TDRD12Q587J7 1177 aaKnown RBP11.63□□□□□ -0.55
TRPM1-201ENST00000256552 SEPT14Q6ZU15 432 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 TADA2BQ86TJ2 420 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 TCHPQ9BT92 498 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRPM1-201ENST00000256552 RBM8AQ9Y5S9 174 aaKnown RBP11.63□□□□□ -0.55
TRPM1-201ENST00000256552 RAD21O60216 631 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 SEC31AO94979 1220 aaKnown RBP11.63□□□□□ -0.55
TRPM1-201ENST00000256552 CHMLP26374 656 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 SLC8A1P32418 973 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 FAM173BQ6P4H8 233 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 HMG20BQ9P0W2 317 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 DMRT2Q9Y5R5 561 aa11.63□□□□□ -0.55
TRPM1-201ENST00000256552 PRG4Q92954 1404 aaPredicted RBP11.62□□□□□ -0.55
TRPM1-201ENST00000256552 HECW1Q76N89 1606 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 KRT18P05783 430 aaKnown RBP11.62□□□□□ -0.55
TRPM1-201ENST00000256552 UBE4AQ14139 1066 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 LRRC8AQ8IWT6 810 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 CTAGE1Q96RT6 745 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 UBAC1Q9BSL1 405 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 CDK19Q9BWU1 502 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 CCDC129Q6ZRS4 1044 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 OTUD7AQ8TE49 926 aaPredicted RBP11.62□□□□□ -0.55
TRPM1-201ENST00000256552 ORC3Q9UBD5 711 aaPredicted RBP11.62□□□□□ -0.55
TRPM1-201ENST00000256552 CD2BP2O95400 341 aaKnown RBP11.62□□□□□ -0.55
TRPM1-201ENST00000256552 CHRM1P11229 460 aaPredicted RBP11.62□□□□□ -0.55
TRPM1-201ENST00000256552 CPA1P15085 419 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 EP400NLQ6ZTU2 488 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 FAM210AQ96ND0 272 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 BRD3Q15059 726 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 CCDC96Q2M329 555 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 GRIPAP1Q4V328 841 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 LRRC23Q53EV4 343 aaPredicted RBP11.62□□□□□ -0.55
TRPM1-201ENST00000256552 ARFGAP2Q8N6H7 521 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 LRRC2Q9BYS8 371 aa11.62□□□□□ -0.55
TRPM1-201ENST00000256552 GNL3LQ9NVN8 582 aaKnown RBP11.62□□□□□ -0.55
TRPM1-201ENST00000256552 TRIM66O15016 1216 aa11.61□□□□□ -0.55
TRPM1-201ENST00000256552 SPATS2Q86XZ4 545 aaKnown RBP11.61□□□□□ -0.55
TRPM1-201ENST00000256552 MICAL1Q8TDZ2 1067 aa11.61□□□□□ -0.55
TRPM1-201ENST00000256552 SPTLC3Q9NUV7 552 aa11.61□□□□□ -0.55
TRPM1-201ENST00000256552 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.61□□□□□ -0.55
TRPM1-201ENST00000256552 EFCAB8A8MWE9 144 aa11.61□□□□□ -0.55
TRPM1-201ENST00000256552 MARCKSP29966 332 aaPredicted RBP11.61□□□□□ -0.55
TRPM1-201ENST00000256552 NRBP1Q9UHY1 535 aa11.61□□□□□ -0.55
TRPM1-201ENST00000256552 CYLC1P35663 651 aaPredicted RBP11.61□□□□□ -0.55
TRPM1-201ENST00000256552 TAOK3Q9H2K8 898 aa11.61□□□□□ -0.55
TRPM1-201ENST00000256552 PDCD2Q16342 344 aaPredicted RBP11.61□□□□□ -0.55
TRPM1-201ENST00000256552 CFAP58Q5T655 872 aa11.61□□□□□ -0.55
TRPM1-201ENST00000256552 FBXO38Q6PIJ6 1188 aa11.61□□□□□ -0.55
TRPM1-201ENST00000256552 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRPM1-201ENST00000256552 ZBTB7BO15156 539 aaPredicted RBP11.61□□□□□ -0.55
TRPM1-201ENST00000256552 CEP85Q6P2H3 762 aa11.61□□□□□ -0.55
TRPM1-201ENST00000256552 SAAL1Q96ER3 474 aa11.61□□□□□ -0.55
TRPM1-201ENST00000256552 NAPGQ99747 312 aaPredicted RBP11.61□□□□□ -0.55
TRPM1-201ENST00000256552 GYS2P54840 703 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 FAM160A1Q05DH4 1040 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 CCDC57Q2TAC2 916 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 KANK3Q6NY19 840 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 VPS37DQ86XT2 251 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 ZHX3Q9H4I2 956 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 USP19O94966 1318 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 SPTLC2O15270 562 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 FANCCQ00597 558 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 DZIP1Q86YF9 867 aaKnown RBP11.6□□□□□ -0.55
TRPM1-201ENST00000256552 RAB11FIP4Q86YS3 637 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 RHPN1Q8TCX5 695 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 IFT81Q8WYA0 676 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 DDX12PQ92771 950 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 CAMSAP2Q08AD1 1489 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 CDK13Q14004 1512 aaKnown RBP11.6□□□□□ -0.55
TRPM1-201ENST00000256552 CCDC160A6NGH7 325 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 MTIF2P46199 727 aaKnown RBP11.6□□□□□ -0.55
TRPM1-201ENST00000256552 SH3BGRP55822 239 aaPredicted RBP11.6□□□□□ -0.55
TRPM1-201ENST00000256552 MYL5Q02045 173 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 WHAMMP3Q1A5X7 153 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 PPP1R42Q7Z4L9 355 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 PDE11AQ9HCR9 933 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 MMP14P50281 582 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms