RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 C1orf167Q5SNV9 1468 aa13.36□□□□□ -0.27
PDE6B-201ENST00000255622 GIMAP6Q6P9H5 292 aa13.36□□□□□ -0.27
PDE6B-201ENST00000255622 UBE3BQ7Z3V4 1068 aa13.36□□□□□ -0.27
PDE6B-201ENST00000255622 TM6SF1Q9BZW5 370 aa13.36□□□□□ -0.27
PDE6B-201ENST00000255622 USP25Q9UHP3 1055 aa13.36□□□□□ -0.27
PDE6B-201ENST00000255622 RSPH14Q9UHP6 348 aa13.36□□□□□ -0.27
PDE6B-201ENST00000255622 CSB-PGBD3P0DP91 1061 aa13.35□□□□□ -0.27
PDE6B-201ENST00000255622 STK3Q13188 491 aa13.35□□□□□ -0.27
PDE6B-201ENST00000255622 METTL22Q9BUU2 404 aaPredicted RBP13.35□□□□□ -0.27
PDE6B-201ENST00000255622 DBNLQ9UJU6 430 aaKnown RBP13.35□□□□□ -0.27
PDE6B-201ENST00000255622 CHMP3Q9Y3E7 222 aa13.35□□□□□ -0.27
PDE6B-201ENST00000255622 COL15A1P39059 1388 aa13.35□□□□□ -0.27
PDE6B-201ENST00000255622 TFCP2Q12800 502 aa13.35□□□□□ -0.27
PDE6B-201ENST00000255622 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
PDE6B-201ENST00000255622 CDC37L1Q7L3B6 337 aa13.35□□□□□ -0.27
PDE6B-201ENST00000255622 LRP10Q7Z4F1 713 aa13.35□□□□□ -0.27
PDE6B-201ENST00000255622 SCN11AQ9UI33 1791 aa13.35□□□□□ -0.27
PDE6B-201ENST00000255622 SH2B1Q9NRF2 756 aaPredicted RBP13.35□□□□□ -0.27
PDE6B-201ENST00000255622 CCDC39Q9UFE4 941 aa13.35□□□□□ -0.27
PDE6B-201ENST00000255622 TATP17735 454 aaPredicted RBP13.34□□□□□ -0.27
PDE6B-201ENST00000255622 CCDC129Q6ZRS4 1044 aa13.34□□□□□ -0.27
PDE6B-201ENST00000255622 PDCL2Q8N4E4 241 aa13.34□□□□□ -0.27
PDE6B-201ENST00000255622 MED23Q9ULK4 1368 aa13.34□□□□□ -0.27
PDE6B-201ENST00000255622 CYP27B1O15528 508 aa13.34□□□□□ -0.27
PDE6B-201ENST00000255622 SEC62Q99442 399 aaKnown RBP13.34□□□□□ -0.27
PDE6B-201ENST00000255622 PTPN12Q05209 780 aaKnown RBP13.33□□□□□ -0.27
PDE6B-201ENST00000255622 DNAJC21Q5F1R6 531 aaKnown RBP13.33□□□□□ -0.27
PDE6B-201ENST00000255622 ZSCAN31Q96LW9 406 aaPredicted RBP13.33□□□□□ -0.27
PDE6B-201ENST00000255622 ARID4AP29374 1257 aaPredicted RBP13.33□□□□□ -0.28
PDE6B-201ENST00000255622 TOB2Q14106 344 aaPredicted RBP13.33□□□□□ -0.28
PDE6B-201ENST00000255622 SLFNL1Q499Z3 407 aa13.33□□□□□ -0.28
PDE6B-201ENST00000255622 LARP1BQ659C4 914 aaKnown RBP13.33□□□□□ -0.28
PDE6B-201ENST00000255622 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
PDE6B-201ENST00000255622 TTC5Q8N0Z6 440 aa13.33□□□□□ -0.28
PDE6B-201ENST00000255622 HIP1O00291 1037 aa13.33□□□□□ -0.28
PDE6B-201ENST00000255622 RFX5P48382 616 aaPredicted RBP13.33□□□□□ -0.28
PDE6B-201ENST00000255622 CSPP1Q1MSJ5 1256 aa13.33□□□□□ -0.28
PDE6B-201ENST00000255622 ATP6V1DQ9Y5K8 247 aa13.33□□□□□ -0.28
PDE6B-201ENST00000255622 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.33□□□□□ -0.28
PDE6B-201ENST00000255622 TNNI3KQ59H18 835 aa13.32□□□□□ -0.28
PDE6B-201ENST00000255622 FPGT-TNNI3KV9GXZ4 949 aa13.32□□□□□ -0.28
PDE6B-201ENST00000255622 ALS2Q96Q42 1657 aa13.32□□□□□ -0.28
PDE6B-201ENST00000255622 TAF5LO75529 589 aa13.32□□□□□ -0.28
PDE6B-201ENST00000255622 RPS6KB1P23443 525 aa13.32□□□□□ -0.28
PDE6B-201ENST00000255622 MAP2K1Q02750 393 aaPredicted RBP13.32□□□□□ -0.28
PDE6B-201ENST00000255622 IFNL2Q8IZJ0 200 aa13.32□□□□□ -0.28
PDE6B-201ENST00000255622 ZNF710Q8N1W2 664 aa13.32□□□□□ -0.28
PDE6B-201ENST00000255622 DBNDD2Q9BQY9 259 aa13.32□□□□□ -0.28
PDE6B-201ENST00000255622 SNRKQ9NRH2 765 aa13.32□□□□□ -0.28
PDE6B-201ENST00000255622 A0A087WZG4 1122 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
PDE6B-201ENST00000255622 PLCB2Q00722 1185 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 SATB1Q01826 763 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 C19orf44Q9H6X5 657 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 CALCOCO1Q9P1Z2 691 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 AFDNP55196 1824 aaKnown RBP13.31□□□□□ -0.28
PDE6B-201ENST00000255622 MRC1P22897 1456 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 CCDC172P0C7W6 258 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 PSMA5P28066 241 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 DDX46Q7L014 1031 aaKnown RBP13.31□□□□□ -0.28
PDE6B-201ENST00000255622 TTC6Q86TZ1 520 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 FAM212AQ96EL1 285 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 CALR3Q96L12 384 aaKnown RBP13.31□□□□□ -0.28
PDE6B-201ENST00000255622 TSPYL1Q9H0U9 437 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 ADCY5O95622 1261 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 EFCC1Q9HA90 598 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 COPRSQ9NQ92 184 aa13.31□□□□□ -0.28
PDE6B-201ENST00000255622 RNF20Q5VTR2 975 aa13.3□□□□□ -0.28
PDE6B-201ENST00000255622 ZNF609O15014 1411 aa13.3□□□□□ -0.28
PDE6B-201ENST00000255622 JAK2O60674 1132 aa13.3□□□□□ -0.28
PDE6B-201ENST00000255622 TDO2P48775 406 aa13.3□□□□□ -0.28
PDE6B-201ENST00000255622 CAMK4Q16566 473 aa13.3□□□□□ -0.28
PDE6B-201ENST00000255622 C17orf53Q8N3J3 647 aaPredicted RBP13.3□□□□□ -0.28
PDE6B-201ENST00000255622 ZNF513Q8N8E2 541 aaPredicted RBP13.3□□□□□ -0.28
PDE6B-201ENST00000255622 FUCA2Q9BTY2 467 aa13.3□□□□□ -0.28
PDE6B-201ENST00000255622 LRRC2Q9BYS8 371 aa13.3□□□□□ -0.28
PDE6B-201ENST00000255622 AP5Z1O43299 807 aa13.3□□□□□ -0.28
PDE6B-201ENST00000255622 PIK3R5Q8WYR1 880 aa13.3□□□□□ -0.28
PDE6B-201ENST00000255622 TFIP11Q9UBB9 837 aaKnown RBP13.3□□□□□ -0.28
PDE6B-201ENST00000255622 FEZ2Q9UHY8 353 aaPredicted RBP13.3□□□□□ -0.28
PDE6B-201ENST00000255622 ATP5JP18859 108 aa13.29□□□□□ -0.28
PDE6B-201ENST00000255622 NBPF20Q3BBV1 942 aa13.29□□□□□ -0.28
PDE6B-201ENST00000255622 FMNL2Q96PY5 1086 aa13.29□□□□□ -0.28
PDE6B-201ENST00000255622 TTC12Q9H892 705 aaPredicted RBP13.29□□□□□ -0.28
PDE6B-201ENST00000255622 ADAMTSL3P82987 1691 aa13.29□□□□□ -0.28
PDE6B-201ENST00000255622 KIF1AQ12756 1690 aa13.29□□□□□ -0.28
PDE6B-201ENST00000255622 LIG1P18858 919 aa13.29□□□□□ -0.28
PDE6B-201ENST00000255622 CABP4P57796 275 aa13.29□□□□□ -0.28
PDE6B-201ENST00000255622 LMBR1LQ6UX01 489 aa13.29□□□□□ -0.28
PDE6B-201ENST00000255622 FAM184AQ8NB25 1140 aa13.29□□□□□ -0.28
PDE6B-201ENST00000255622 DCAF5Q96JK2 942 aa13.29□□□□□ -0.28
PDE6B-201ENST00000255622 ARFGEF2Q9Y6D5 1785 aa13.29□□□□□ -0.28
PDE6B-201ENST00000255622 JCADQ9P266 1359 aa13.28□□□□□ -0.28
PDE6B-201ENST00000255622 NCAPGQ9BPX3 1015 aa13.28□□□□□ -0.28
PDE6B-201ENST00000255622 LMTK3Q96Q04 1460 aa13.28□□□□□ -0.28
PDE6B-201ENST00000255622 ATF3P18847 181 aa13.28□□□□□ -0.28
PDE6B-201ENST00000255622 DDX11Q96FC9 970 aa13.28□□□□□ -0.28
PDE6B-201ENST00000255622 RABL6Q3YEC7 729 aaPredicted RBP13.28□□□□□ -0.28
PDE6B-201ENST00000255622 COL18A1P39060 1754 aa13.27□□□□□ -0.28
PDE6B-201ENST00000255622 A0A0G2JLW4 131 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms