RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 DDX60Q8IY21 1712 aaKnown RBP13.78□□□□□ -0.2
CLUHP3-201ENST00000254109 ABCC12Q96J65 1359 aa13.77□□□□□ -0.2
CLUHP3-201ENST00000254109 GOLGA6L22H0YM25 854 aa13.77□□□□□ -0.21
CLUHP3-201ENST00000254109 SGSM2O43147 1006 aa13.77□□□□□ -0.21
CLUHP3-201ENST00000254109 MMP10P09238 476 aa13.77□□□□□ -0.21
CLUHP3-201ENST00000254109 RABL6Q3YEC7 729 aaPredicted RBP13.77□□□□□ -0.21
CLUHP3-201ENST00000254109 TPTE2Q6XPS3 522 aa13.77□□□□□ -0.21
CLUHP3-201ENST00000254109 IL17RAQ96F46 866 aa13.77□□□□□ -0.21
CLUHP3-201ENST00000254109 DIAPH3Q9NSV4 1193 aa13.77□□□□□ -0.21
CLUHP3-201ENST00000254109 CHMP3Q9Y3E7 222 aa13.77□□□□□ -0.21
CLUHP3-201ENST00000254109 MYH3P11055 1940 aa13.77□□□□□ -0.21
CLUHP3-201ENST00000254109 PSDA5PKW4 1024 aaPredicted RBP13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 NPHP1O15259 732 aa13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 PDE8AO60658 829 aa13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 SKOR2Q2VWA4 1001 aaPredicted RBP13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 L1TD1Q5T7N2 865 aaKnown RBP13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 C3orf67Q6ZVT6 689 aa13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 PLA2G12BQ9BX93 195 aa13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 NYXQ9GZU5 481 aa13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 HSPA4P34932 840 aa13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 CTSWP56202 376 aa13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 PRR5LQ6MZQ0 368 aa13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 KLHDC4Q8TBB5 520 aa13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 EVI5LQ96CN4 794 aa13.76□□□□□ -0.21
CLUHP3-201ENST00000254109 CASZ1Q86V15 1759 aa13.75□□□□□ -0.21
CLUHP3-201ENST00000254109 SASH1O94885 1247 aa13.75□□□□□ -0.21
CLUHP3-201ENST00000254109 CWC27Q6UX04 472 aaKnown RBP13.75□□□□□ -0.21
CLUHP3-201ENST00000254109 CNBD1Q8NA66 436 aa13.75□□□□□ -0.21
CLUHP3-201ENST00000254109 TTLL11Q8NHH1 800 aa13.75□□□□□ -0.21
CLUHP3-201ENST00000254109 PALD1Q9ULE6 856 aa13.75□□□□□ -0.21
CLUHP3-201ENST00000254109 RAD50Q92878 1312 aa13.75□□□□□ -0.21
CLUHP3-201ENST00000254109 HIP1O00291 1037 aa13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 ZBTB7AO95365 584 aa13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 CSF1RP07333 972 aa13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 CLEC17AQ6ZS10 378 aa13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 SIL1Q9H173 461 aa13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 LAMB2P55268 1798 aa13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 RFX5P48382 616 aaPredicted RBP13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 SLC10A5Q5PT55 438 aa13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 EAF2Q96CJ1 260 aaPredicted RBP13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 TMX3Q96JJ7 454 aa13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 GREM2Q9H772 168 aa13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 COPRSQ9NQ92 184 aa13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 PARP3Q9Y6F1 533 aa13.74□□□□□ -0.21
CLUHP3-201ENST00000254109 ZNF594Q96JF6 807 aaPredicted RBP13.73□□□□□ -0.21
CLUHP3-201ENST00000254109 CCDC8Q9H0W5 538 aaPredicted RBP13.73□□□□□ -0.21
CLUHP3-201ENST00000254109 GZF1Q9H116 711 aaPredicted RBP13.73□□□□□ -0.21
CLUHP3-201ENST00000254109 TNRC6CQ9HCJ0 1690 aaKnown RBP13.73□□□□□ -0.21
CLUHP3-201ENST00000254109 LSG1Q9H089 658 aaKnown RBP13.72□□□□□ -0.21
CLUHP3-201ENST00000254109 IL25Q9H293 177 aa13.72□□□□□ -0.21
CLUHP3-201ENST00000254109 ATF5Q9Y2D1 282 aaPredicted RBP13.72□□□□□ -0.21
CLUHP3-201ENST00000254109 TAF1P21675 1872 aa13.72□□□□□ -0.21
CLUHP3-201ENST00000254109 NRXN2Q9P2S2 1712 aa13.72□□□□□ -0.21
CLUHP3-201ENST00000254109 GOLGA6L3A6NEY3 463 aa13.71□□□□□ -0.21
CLUHP3-201ENST00000254109 BAG4O95429 457 aaKnown RBP13.71□□□□□ -0.21
CLUHP3-201ENST00000254109 ITGA6P23229 1130 aa13.71□□□□□ -0.21
CLUHP3-201ENST00000254109 PTPN12Q05209 780 aaKnown RBP13.71□□□□□ -0.21
CLUHP3-201ENST00000254109 ZGPATQ8N5A5 531 aaKnown RBP13.71□□□□□ -0.21
CLUHP3-201ENST00000254109 SLC16A10Q8TF71 515 aa13.71□□□□□ -0.21
CLUHP3-201ENST00000254109 SEC31BQ9NQW1 1179 aa13.71□□□□□ -0.21
CLUHP3-201ENST00000254109 CYP2E1P05181 493 aaPredicted RBP13.71□□□□□ -0.22
CLUHP3-201ENST00000254109 ST5P78524 1137 aa13.71□□□□□ -0.22
CLUHP3-201ENST00000254109 CUL4AQ13619 759 aa13.71□□□□□ -0.22
CLUHP3-201ENST00000254109 CCDC57Q2TAC2 916 aa13.71□□□□□ -0.22
CLUHP3-201ENST00000254109 INTS4Q96HW7 963 aaKnown RBP13.71□□□□□ -0.22
CLUHP3-201ENST00000254109 NLRP3Q96P20 1036 aa13.71□□□□□ -0.22
CLUHP3-201ENST00000254109 COL4A1P02462 1669 aa13.7□□□□□ -0.22
CLUHP3-201ENST00000254109 ANKRD31Q8N7Z5 1873 aa13.7□□□□□ -0.22
CLUHP3-201ENST00000254109 SOCS7O14512 581 aa13.7□□□□□ -0.22
CLUHP3-201ENST00000254109 HSP90B1P14625 803 aaKnown RBP13.7□□□□□ -0.22
CLUHP3-201ENST00000254109 IFIT5Q13325 482 aaKnown RBP13.7□□□□□ -0.22
CLUHP3-201ENST00000254109 UPF3BQ9BZI7 483 aaKnown RBP13.7□□□□□ -0.22
CLUHP3-201ENST00000254109 SNX14Q9Y5W7 946 aa13.7□□□□□ -0.22
CLUHP3-201ENST00000254109 SF3B3Q15393 1217 aaKnown RBP13.69□□□□□ -0.22
CLUHP3-201ENST00000254109 CCDC152Q4G0S7 254 aa13.69□□□□□ -0.22
CLUHP3-201ENST00000254109 PUS3Q9BZE2 481 aaKnown RBP13.69□□□□□ -0.22
CLUHP3-201ENST00000254109 ANKRD18BA2A2Z9 1011 aa13.69□□□□□ -0.22
CLUHP3-201ENST00000254109 LRRC24Q50LG9 513 aa13.69□□□□□ -0.22
CLUHP3-201ENST00000254109 NOL8Q76FK4 1167 aaKnown RBP13.69□□□□□ -0.22
CLUHP3-201ENST00000254109 FSD1Q9BTV5 496 aa13.69□□□□□ -0.22
CLUHP3-201ENST00000254109 BOLA2Q9H3K6 86 aa13.69□□□□□ -0.22
CLUHP3-201ENST00000254109 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.69□□□□□ -0.22
CLUHP3-201ENST00000254109 SPEF2Q9C093 1822 aa13.68□□□□□ -0.22
CLUHP3-201ENST00000254109 TFCP2Q12800 502 aa13.68□□□□□ -0.22
CLUHP3-201ENST00000254109 TNNI3KQ59H18 835 aa13.68□□□□□ -0.22
CLUHP3-201ENST00000254109 TAF7LQ5H9L4 462 aa13.68□□□□□ -0.22
CLUHP3-201ENST00000254109 MTFR1LQ9H019 292 aa13.68□□□□□ -0.22
CLUHP3-201ENST00000254109 TLR7Q9NYK1 1049 aaKnown RBP13.68□□□□□ -0.22
CLUHP3-201ENST00000254109 ISY1Q9ULR0 285 aaKnown RBP13.68□□□□□ -0.22
CLUHP3-201ENST00000254109 FPGT-TNNI3KV9GXZ4 949 aa13.68□□□□□ -0.22
CLUHP3-201ENST00000254109 MCTP1Q6DN14 999 aa13.67□□□□□ -0.22
CLUHP3-201ENST00000254109 FSD2A1L4K1 749 aa13.67□□□□□ -0.22
CLUHP3-201ENST00000254109 ATP5JP18859 108 aa13.67□□□□□ -0.22
CLUHP3-201ENST00000254109 KCNJ4P48050 445 aa13.67□□□□□ -0.22
CLUHP3-201ENST00000254109 ATG9AQ7Z3C6 839 aa13.67□□□□□ -0.22
CLUHP3-201ENST00000254109 CELF1Q92879 486 aaKnown RBP13.67□□□□□ -0.22
CLUHP3-201ENST00000254109 BRIP1Q9BX63 1249 aa13.67□□□□□ -0.22
CLUHP3-201ENST00000254109 CCDC171Q6TFL3 1326 aa13.66□□□□□ -0.22
CLUHP3-201ENST00000254109 ZKSCAN1P17029 563 aaPredicted RBP13.66□□□□□ -0.22
CLUHP3-201ENST00000254109 PTH1RQ03431 593 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms