RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 ZSCAN26Q16670 478 aa23.85■■□□□ 1.41
RARA-201ENST00000254066 CREB3L3Q68CJ9 461 aa23.85■■□□□ 1.41
RARA-201ENST00000254066 NEK11Q8NG66 645 aa23.85■■□□□ 1.41
RARA-201ENST00000254066 TRERF1Q96PN7 1200 aa23.85■■□□□ 1.41
RARA-201ENST00000254066 HIP1O00291 1037 aa23.85■■□□□ 1.41
RARA-201ENST00000254066 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
RARA-201ENST00000254066 SNRKQ9NRH2 765 aa23.85■■□□□ 1.41
RARA-201ENST00000254066 RSPH14Q9UHP6 348 aa23.85■■□□□ 1.41
RARA-201ENST00000254066 NOP2P46087 812 aaKnown RBP23.84■■□□□ 1.41
RARA-201ENST00000254066 MAP4K1Q92918 833 aa23.84■■□□□ 1.41
RARA-201ENST00000254066 EXOC4Q96A65 974 aa23.84■■□□□ 1.41
RARA-201ENST00000254066 MYO1CO00159 1063 aa23.84■■□□□ 1.41
RARA-201ENST00000254066 CASQ1P31415 396 aa23.84■■□□□ 1.41
RARA-201ENST00000254066 ATL3Q6DD88 541 aa23.84■■□□□ 1.41
RARA-201ENST00000254066 PPP1R42Q7Z4L9 355 aa23.84■■□□□ 1.41
RARA-201ENST00000254066 NBPF11Q86T75 865 aa23.84■■□□□ 1.41
RARA-201ENST00000254066 FBXO18Q8NFZ0 1043 aa23.83■■□□□ 1.41
RARA-201ENST00000254066 SMARCE1Q969G3 411 aa23.83■■□□□ 1.41
RARA-201ENST00000254066 BPIFA3Q9BQP9 254 aa23.83■■□□□ 1.41
RARA-201ENST00000254066 TADA3O75528 432 aa23.83■■□□□ 1.41
RARA-201ENST00000254066 BLOC1S2Q6QNY1 142 aa23.83■■□□□ 1.41
RARA-201ENST00000254066 NFATC2IPQ8NCF5 419 aa23.83■■□□□ 1.41
RARA-201ENST00000254066 MNS1Q8NEH6 495 aa23.83■■□□□ 1.41
RARA-201ENST00000254066 AMOTL2Q9Y2J4 779 aa23.83■■□□□ 1.41
RARA-201ENST00000254066 RBM8AQ9Y5S9 174 aaKnown RBP23.83■■□□□ 1.41
RARA-201ENST00000254066 POLR3GO15318 223 aaPredicted RBP23.82■■□□□ 1.4
RARA-201ENST00000254066 SFPQP23246 707 aaKnown RBP eCLIP23.82■■□□□ 1.4
RARA-201ENST00000254066 GEMIN8Q9NWZ8 242 aaKnown RBP23.82■■□□□ 1.4
RARA-201ENST00000254066 ZRANB1Q9UGI0 708 aa23.82■■□□□ 1.4
RARA-201ENST00000254066 LRRFIP1Q32MZ4 808 aaKnown RBP23.82■■□□□ 1.4
RARA-201ENST00000254066 DNAI1Q9UI46 699 aa23.82■■□□□ 1.4
RARA-201ENST00000254066 RCOR1Q9UKL0 485 aa23.82■■□□□ 1.4
RARA-201ENST00000254066 EVI5LQ96CN4 794 aa23.81■■□□□ 1.4
RARA-201ENST00000254066 RPS6KB1P23443 525 aa23.81■■□□□ 1.4
RARA-201ENST00000254066 OAS2P29728 719 aaKnown RBP23.81■■□□□ 1.4
RARA-201ENST00000254066 CCDC73Q6ZRK6 1079 aa23.81■■□□□ 1.4
RARA-201ENST00000254066 LRRN4CLQ8ND94 238 aa23.81■■□□□ 1.4
RARA-201ENST00000254066 SMC1AQ14683 1233 aaKnown RBP23.8■■□□□ 1.4
RARA-201ENST00000254066 TSGA10IPQ3SY00 556 aa23.8■■□□□ 1.4
RARA-201ENST00000254066 GPR161Q8N6U8 529 aaKnown RBP23.8■■□□□ 1.4
RARA-201ENST00000254066 CCDC191Q8NCU4 936 aa23.8■■□□□ 1.4
RARA-201ENST00000254066 RBM33Q96EV2 1170 aaKnown RBP23.8■■□□□ 1.4
RARA-201ENST00000254066 GPATCH3Q96I76 525 aa23.8■■□□□ 1.4
RARA-201ENST00000254066 MED1Q15648 1581 aaPredicted RBP23.8■■□□□ 1.4
RARA-201ENST00000254066 AKAP12Q02952 1782 aa23.8■■□□□ 1.4
RARA-201ENST00000254066 PTPRUQ92729 1446 aa23.8■■□□□ 1.4
RARA-201ENST00000254066 TBC1D8O95759 1140 aa23.8■■□□□ 1.4
RARA-201ENST00000254066 MAPK8IP2Q13387 824 aaPredicted RBP23.8■■□□□ 1.4
RARA-201ENST00000254066 GOLGA6L1Q8N7Z2 621 aa23.8■■□□□ 1.4
RARA-201ENST00000254066 C19orf44Q9H6X5 657 aa23.8■■□□□ 1.4
RARA-201ENST00000254066 ATG3Q9NT62 314 aa23.8■■□□□ 1.4
RARA-201ENST00000254066 SLC27A2O14975 620 aa23.79■■□□□ 1.4
RARA-201ENST00000254066 KINO60870 393 aaKnown RBP23.79■■□□□ 1.4
RARA-201ENST00000254066 ST5P78524 1137 aa23.79■■□□□ 1.4
RARA-201ENST00000254066 CADPS2Q86UW7 1296 aa23.79■■□□□ 1.4
RARA-201ENST00000254066 CCAR1Q8IX12 1150 aaKnown RBP23.79■■□□□ 1.4
RARA-201ENST00000254066 SLAIN2Q9P270 581 aa23.79■■□□□ 1.4
RARA-201ENST00000254066 ROBO1Q9Y6N7 1651 aa23.79■■□□□ 1.4
RARA-201ENST00000254066 DHX16O60231 1041 aaKnown RBP23.79■■□□□ 1.4
RARA-201ENST00000254066 ARMCX5Q6P1M9 558 aa23.79■■□□□ 1.4
RARA-201ENST00000254066 CC2D1AQ6P1N0 951 aaPredicted RBP23.79■■□□□ 1.4
RARA-201ENST00000254066 SRLQ86TD4 932 aa23.79■■□□□ 1.4
RARA-201ENST00000254066 HMG20BQ9P0W2 317 aa23.79■■□□□ 1.4
RARA-201ENST00000254066 FAM160A1Q05DH4 1040 aa23.78■■□□□ 1.4
RARA-201ENST00000254066 FCHSD1Q86WN1 690 aa23.78■■□□□ 1.4
RARA-201ENST00000254066 HOMER1Q86YM7 354 aa23.78■■□□□ 1.4
RARA-201ENST00000254066 AOPEPQ8N6M6 819 aa23.78■■□□□ 1.4
RARA-201ENST00000254066 BRMS1Q9HCU9 246 aa23.78■■□□□ 1.4
RARA-201ENST00000254066 ECHDC1Q9NTX5 307 aa23.78■■□□□ 1.4
RARA-201ENST00000254066 MIS18AQ9NYP9 233 aa23.78■■□□□ 1.4
RARA-201ENST00000254066 WASLO00401 505 aaPredicted RBP23.78■■□□□ 1.4
RARA-201ENST00000254066 PSME1Q06323 249 aa23.78■■□□□ 1.4
RARA-201ENST00000254066 TOB2Q14106 344 aaPredicted RBP23.78■■□□□ 1.4
RARA-201ENST00000254066 NOM1Q5C9Z4 860 aaKnown RBP23.78■■□□□ 1.4
RARA-201ENST00000254066 ENGASEQ8NFI3 743 aa23.78■■□□□ 1.4
RARA-201ENST00000254066 DCCP43146 1447 aa23.77■■□□□ 1.4
RARA-201ENST00000254066 JAKMIP3Q5VZ66 844 aa23.77■■□□□ 1.4
RARA-201ENST00000254066 LRRC37A3O60309 1634 aa23.77■■□□□ 1.4
RARA-201ENST00000254066 SRGAP3O43295 1099 aa23.76■■□□□ 1.39
RARA-201ENST00000254066 IVLP07476 585 aa23.76■■□□□ 1.39
RARA-201ENST00000254066 BABAM1Q9NWV8 329 aa23.76■■□□□ 1.39
RARA-201ENST00000254066 DTNBO60941 627 aa23.76■■□□□ 1.39
RARA-201ENST00000254066 CLASRPQ8N2M8 674 aaKnown RBP23.76■■□□□ 1.39
RARA-201ENST00000254066 REXO1L1PQ8IX06 675 aa23.75■■□□□ 1.39
RARA-201ENST00000254066 ARFGAP3Q9NP61 516 aa23.75■■□□□ 1.39
RARA-201ENST00000254066 MYH15Q9Y2K3 1946 aa23.75■■□□□ 1.39
RARA-201ENST00000254066 METP08581 1390 aa23.75■■□□□ 1.39
RARA-201ENST00000254066 ATF3P18847 181 aa23.75■■□□□ 1.39
RARA-201ENST00000254066 TRIM65Q6PJ69 517 aa23.75■■□□□ 1.39
RARA-201ENST00000254066 TICAM2Q86XR7 235 aa23.75■■□□□ 1.39
RARA-201ENST00000254066 MPHOSPH8Q99549 860 aa23.75■■□□□ 1.39
RARA-201ENST00000254066 H3BQV1 296 aa23.74■■□□□ 1.39
RARA-201ENST00000254066 ACTN2P35609 894 aa23.74■■□□□ 1.39
RARA-201ENST00000254066 ADD1P35611 737 aaKnown RBP23.74■■□□□ 1.39
RARA-201ENST00000254066 IFFO2Q5TF58 517 aa23.74■■□□□ 1.39
RARA-201ENST00000254066 ICE2Q659A1 982 aa23.74■■□□□ 1.39
RARA-201ENST00000254066 NAA16Q6N069 864 aaPredicted RBP23.74■■□□□ 1.39
RARA-201ENST00000254066 C10orf67Q8IYJ2 551 aa23.74■■□□□ 1.39
RARA-201ENST00000254066 MSL3Q8N5Y2 521 aaKnown RBP23.74■■□□□ 1.39
RARA-201ENST00000254066 BRF1Q92994 677 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms