RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 CWF19L2Q2TBE0 894 aaKnown RBP18.5■□□□□ 0.55
SLC6A8-201ENST00000253122 CCDC34Q96HJ3 373 aa18.5■□□□□ 0.55
SLC6A8-201ENST00000253122 TRIM34Q9BYJ4 488 aa18.5■□□□□ 0.55
SLC6A8-201ENST00000253122 TOMM22Q9NS69 142 aa18.5■□□□□ 0.55
SLC6A8-201ENST00000253122 TTC41PQ6P2S7 1318 aa18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 MPRIPQ6WCQ1 1025 aa18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 FLT4P35916 1363 aa18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 AOX1Q06278 1338 aa18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 A0A1B0GVL5 298 aa18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 CCDC144BQ3MJ40 725 aa18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 HSP90B2PQ58FF3 399 aa18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 MON2Q7Z3U7 1717 aa18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 CCDC144CPQ8IYA2 1237 aa18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 ANKRD7Q92527 254 aa18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 TULP1O00294 542 aaPredicted RBP18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 PES1O00541 588 aaKnown RBP18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 CHST3Q7LGC8 479 aa18.49■□□□□ 0.55
SLC6A8-201ENST00000253122 LMAN1P49257 510 aa18.48■□□□□ 0.55
SLC6A8-201ENST00000253122 LEKR1Q6ZMV7 388 aa18.48■□□□□ 0.55
SLC6A8-201ENST00000253122 TTC14Q96N46 770 aa18.48■□□□□ 0.55
SLC6A8-201ENST00000253122 USP27XA6NNY8 438 aa18.48■□□□□ 0.55
SLC6A8-201ENST00000253122 FBXO38Q6PIJ6 1188 aa18.48■□□□□ 0.55
SLC6A8-201ENST00000253122 EDC3Q96F86 508 aaKnown RBP18.48■□□□□ 0.55
SLC6A8-201ENST00000253122 NDUFB9Q9Y6M9 179 aa18.48■□□□□ 0.55
SLC6A8-201ENST00000253122 MAP2P11137 1827 aaKnown RBP18.48■□□□□ 0.55
SLC6A8-201ENST00000253122 OVOS2A0A0J9YW53 1432 aa18.48■□□□□ 0.55
SLC6A8-201ENST00000253122 OVOS2Q6IE36 1432 aa18.48■□□□□ 0.55
SLC6A8-201ENST00000253122 APPP05067 770 aa18.47■□□□□ 0.55
SLC6A8-201ENST00000253122 RPS6KB1P23443 525 aa18.47■□□□□ 0.55
SLC6A8-201ENST00000253122 GNG11P61952 73 aa18.47■□□□□ 0.55
SLC6A8-201ENST00000253122 RALYLQ86SE5 291 aaKnown RBP18.47■□□□□ 0.55
SLC6A8-201ENST00000253122 ORAI2Q96SN7 254 aa18.47■□□□□ 0.55
SLC6A8-201ENST00000253122 TERF2Q15554 542 aa18.47■□□□□ 0.55
SLC6A8-201ENST00000253122 TDRD7Q8NHU6 1098 aaKnown RBP18.47■□□□□ 0.55
SLC6A8-201ENST00000253122 CHMP4CQ96CF2 233 aa18.47■□□□□ 0.55
SLC6A8-201ENST00000253122 TOP1P11387 765 aaKnown RBP18.47■□□□□ 0.55
SLC6A8-201ENST00000253122 C11orf57Q6ZUT1 292 aaPredicted RBP18.47■□□□□ 0.55
SLC6A8-201ENST00000253122 DDX46Q7L014 1031 aaKnown RBP18.47■□□□□ 0.55
SLC6A8-201ENST00000253122 AKAP12Q02952 1782 aa18.46■□□□□ 0.55
SLC6A8-201ENST00000253122 KLHDC4Q8TBB5 520 aa18.46■□□□□ 0.55
SLC6A8-201ENST00000253122 SBNO1A3KN83 1393 aa18.46■□□□□ 0.55
SLC6A8-201ENST00000253122 PI4K2BQ8TCG2 481 aa18.46■□□□□ 0.55
SLC6A8-201ENST00000253122 TM6SF1Q9BZW5 370 aa18.46■□□□□ 0.55
SLC6A8-201ENST00000253122 KMT5BQ4FZB7 885 aa18.46■□□□□ 0.55
SLC6A8-201ENST00000253122 KCNH5Q8NCM2 988 aa18.46■□□□□ 0.55
SLC6A8-201ENST00000253122 CCDC150Q8NCX0 1101 aa18.46■□□□□ 0.55
SLC6A8-201ENST00000253122 FTOQ9C0B1 505 aaKnown RBP eCLIP18.46■□□□□ 0.552e-16■■□□□ 12.1
SLC6A8-201ENST00000253122 ST7Q9NRC1 585 aa18.46■□□□□ 0.55
SLC6A8-201ENST00000253122 EPB41L2O43491 1005 aaKnown RBP18.45■□□□□ 0.54
SLC6A8-201ENST00000253122 TRIM29Q14134 588 aa18.45■□□□□ 0.54
SLC6A8-201ENST00000253122 CPLX2Q6PUV4 134 aaKnown RBP18.45■□□□□ 0.54
SLC6A8-201ENST00000253122 CCDC129Q6ZRS4 1044 aa18.45■□□□□ 0.54
SLC6A8-201ENST00000253122 APOBRQ0VD83 1088 aa18.45■□□□□ 0.54
SLC6A8-201ENST00000253122 TAF7LQ5H9L4 462 aa18.45■□□□□ 0.54
SLC6A8-201ENST00000253122 MRPS27Q92552 414 aaKnown RBP18.45■□□□□ 0.54
SLC6A8-201ENST00000253122 C8orf76Q96K31 380 aa18.45■□□□□ 0.54
SLC6A8-201ENST00000253122 NCOA5Q9HCD5 579 aaKnown RBP18.44■□□□□ 0.54
SLC6A8-201ENST00000253122 HMG20BQ9P0W2 317 aa18.44■□□□□ 0.54
SLC6A8-201ENST00000253122 CASQ1P31415 396 aa18.44■□□□□ 0.54
SLC6A8-201ENST00000253122 KRT28Q7Z3Y7 464 aa18.44■□□□□ 0.54
SLC6A8-201ENST00000253122 CARD6Q9BX69 1037 aa18.44■□□□□ 0.54
SLC6A8-201ENST00000253122 CTIFO43310 598 aaKnown RBP18.44■□□□□ 0.54
SLC6A8-201ENST00000253122 UBASH3AP57075 661 aa18.44■□□□□ 0.54
SLC6A8-201ENST00000253122 CADPS2Q86UW7 1296 aa18.44■□□□□ 0.54
SLC6A8-201ENST00000253122 NEK11Q8NG66 645 aa18.44■□□□□ 0.54
SLC6A8-201ENST00000253122 UTP14AQ9BVJ6 771 aaKnown RBP18.44■□□□□ 0.54
SLC6A8-201ENST00000253122 DBF4Q9UBU7 674 aaPredicted RBP18.44■□□□□ 0.54
SLC6A8-201ENST00000253122 A0A0D9SFI3 127 aa18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 USP31Q70CQ4 1352 aa18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 CBFA2T2O43439 604 aa18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 TMEM94Q12767 1356 aa18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 TRDNQ13061 729 aa18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 NFXL1Q6ZNB6 911 aa18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 C10orf67Q8IYJ2 551 aa18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 CCDC102AQ96A19 550 aa18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 PTPDC1A2A3K4 754 aa18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 ZSCAN12O43309 604 aa18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 MCM6Q14566 821 aa18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 OTUD7BQ6GQQ9 843 aa18.43■□□□□ 0.54
SLC6A8-201ENST00000253122 NOM1Q5C9Z4 860 aaKnown RBP18.42■□□□□ 0.54
SLC6A8-201ENST00000253122 CHD2O14647 1828 aaKnown RBP18.42■□□□□ 0.54
SLC6A8-201ENST00000253122 MARCKSP29966 332 aaPredicted RBP18.42■□□□□ 0.54
SLC6A8-201ENST00000253122 XPO4Q9C0E2 1151 aaKnown RBP18.42■□□□□ 0.54
SLC6A8-201ENST00000253122 TOPAZ1Q8N9V7 1692 aa18.42■□□□□ 0.54
SLC6A8-201ENST00000253122 HAND2P61296 217 aa18.42■□□□□ 0.54
SLC6A8-201ENST00000253122 FAM160A1Q05DH4 1040 aa18.42■□□□□ 0.54
SLC6A8-201ENST00000253122 FKBP4Q02790 459 aaKnown RBP eCLIP18.41■□□□□ 0.54
SLC6A8-201ENST00000253122 CPLX3Q8WVH0 158 aa18.41■□□□□ 0.54
SLC6A8-201ENST00000253122 ARFGAP3Q9NP61 516 aa18.41■□□□□ 0.54
SLC6A8-201ENST00000253122 EVCP57679 992 aa18.41■□□□□ 0.54
SLC6A8-201ENST00000253122 CSB-PGBD3P0DP91 1061 aa18.41■□□□□ 0.54
SLC6A8-201ENST00000253122 KRBA2Q6ZNG9 492 aa18.41■□□□□ 0.54
SLC6A8-201ENST00000253122 MRFAP1L1Q96HT8 127 aa18.41■□□□□ 0.54
SLC6A8-201ENST00000253122 PGBD1Q96JS3 809 aa18.41■□□□□ 0.54
SLC6A8-201ENST00000253122 USP28Q96RU2 1077 aa18.41■□□□□ 0.54
SLC6A8-201ENST00000253122 FUCA2Q9BTY2 467 aa18.41■□□□□ 0.54
SLC6A8-201ENST00000253122 ELP1O95163 1332 aa18.4■□□□□ 0.54
SLC6A8-201ENST00000253122 DHX16O60231 1041 aaKnown RBP18.4■□□□□ 0.54
SLC6A8-201ENST00000253122 TPM1P09493 284 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms