RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 MAP4K1Q92918 833 aa14.03□□□□□ -0.16
USHBP1-201ENST00000252597 CLSTN2Q9H4D0 955 aa14.03□□□□□ -0.16
USHBP1-201ENST00000252597 PHF8Q9UPP1 1060 aa14.03□□□□□ -0.16
USHBP1-201ENST00000252597 RXRAP19793 462 aa14.03□□□□□ -0.16
USHBP1-201ENST00000252597 USP28Q96RU2 1077 aa14.03□□□□□ -0.16
USHBP1-201ENST00000252597 ST7Q9NRC1 585 aa14.03□□□□□ -0.16
USHBP1-201ENST00000252597 SPTLC3Q9NUV7 552 aa14.03□□□□□ -0.16
USHBP1-201ENST00000252597 TTC21AQ8NDW8 1320 aa14.03□□□□□ -0.16
USHBP1-201ENST00000252597 ARHGEF10O15013 1369 aa14.03□□□□□ -0.16
USHBP1-201ENST00000252597 CPLX1O14810 134 aa14.03□□□□□ -0.16
USHBP1-201ENST00000252597 ZBTB22O15209 634 aa14.03□□□□□ -0.16
USHBP1-201ENST00000252597 LMOD1P29536 600 aaPredicted RBP14.03□□□□□ -0.16
USHBP1-201ENST00000252597 PROSER2Q86WR7 435 aaPredicted RBP14.03□□□□□ -0.16
USHBP1-201ENST00000252597 CFAP45Q9UL16 551 aa14.03□□□□□ -0.16
USHBP1-201ENST00000252597 MARCKSP29966 332 aaPredicted RBP14.02□□□□□ -0.16
USHBP1-201ENST00000252597 GOLGA8FQ08AF8 430 aa14.02□□□□□ -0.16
USHBP1-201ENST00000252597 GOLGA8DPQ0D2H9 430 aa14.02□□□□□ -0.16
USHBP1-201ENST00000252597 TTLL5Q6EMB2 1281 aa14.02□□□□□ -0.16
USHBP1-201ENST00000252597 A0A087WZG4 1122 aa14.02□□□□□ -0.17
USHBP1-201ENST00000252597 PTPDC1A2A3K4 754 aa14.02□□□□□ -0.17
USHBP1-201ENST00000252597 POLR3GO15318 223 aaPredicted RBP14.02□□□□□ -0.17
USHBP1-201ENST00000252597 APPP05067 770 aa14.02□□□□□ -0.17
USHBP1-201ENST00000252597 PDILTQ8N807 584 aa14.02□□□□□ -0.17
USHBP1-201ENST00000252597 GTF3C6Q969F1 213 aa14.02□□□□□ -0.17
USHBP1-201ENST00000252597 ZFP91Q96JP5 570 aaPredicted RBP14.02□□□□□ -0.17
USHBP1-201ENST00000252597 AOX1Q06278 1338 aa14.02□□□□□ -0.17
USHBP1-201ENST00000252597 DLG5Q8TDM6 1919 aa14.02□□□□□ -0.17
USHBP1-201ENST00000252597 HIP1O00291 1037 aa14.02□□□□□ -0.17
USHBP1-201ENST00000252597 CCDC82Q8N4S0 544 aa14.02□□□□□ -0.17
USHBP1-201ENST00000252597 NFATC2IPQ8NCF5 419 aa14.02□□□□□ -0.17
USHBP1-201ENST00000252597 TOPAZ1Q8N9V7 1692 aa14.01□□□□□ -0.17
USHBP1-201ENST00000252597 CYP21A2P08686 494 aa14.01□□□□□ -0.17
USHBP1-201ENST00000252597 CDK11BP21127 795 aaKnown RBP14.01□□□□□ -0.17
USHBP1-201ENST00000252597 SCRN1Q12765 414 aa14.01□□□□□ -0.17
USHBP1-201ENST00000252597 SYT10Q6XYQ8 523 aa14.01□□□□□ -0.17
USHBP1-201ENST00000252597 TOMM22Q9NS69 142 aa14.01□□□□□ -0.17
USHBP1-201ENST00000252597 CEP57L1Q8IYX8 460 aa14□□□□□ -0.17
USHBP1-201ENST00000252597 TTC5Q8N0Z6 440 aa14□□□□□ -0.17
USHBP1-201ENST00000252597 SMTNL1A8MU46 457 aa14□□□□□ -0.17
USHBP1-201ENST00000252597 LINS1Q8NG48 757 aa14□□□□□ -0.17
USHBP1-201ENST00000252597 ZNF594Q96JF6 807 aaPredicted RBP14□□□□□ -0.17
USHBP1-201ENST00000252597 ORAI2Q96SN7 254 aa14□□□□□ -0.17
USHBP1-201ENST00000252597 ZSWIM4Q9H7M6 989 aa14□□□□□ -0.17
USHBP1-201ENST00000252597 IFNKQ9P0W0 207 aa14□□□□□ -0.17
USHBP1-201ENST00000252597 DBNLQ9UJU6 430 aaKnown RBP14□□□□□ -0.17
USHBP1-201ENST00000252597 GIGYF1O75420 1035 aaPredicted RBP14□□□□□ -0.17
USHBP1-201ENST00000252597 TAF5LO75529 589 aa14□□□□□ -0.17
USHBP1-201ENST00000252597 XRN1Q8IZH2 1706 aaKnown RBP14□□□□□ -0.17
USHBP1-201ENST00000252597 LMBR1LQ6UX01 489 aa13.99□□□□□ -0.17
USHBP1-201ENST00000252597 HDAC5Q9UQL6 1122 aa13.99□□□□□ -0.17
USHBP1-201ENST00000252597 STX1AQ16623 288 aa13.99□□□□□ -0.17
USHBP1-201ENST00000252597 SYNE3Q6ZMZ3 975 aa13.99□□□□□ -0.17
USHBP1-201ENST00000252597 CABLES1Q8TDN4 633 aa13.99□□□□□ -0.17
USHBP1-201ENST00000252597 RAPGEF4Q8WZA2 1011 aa13.99□□□□□ -0.17
USHBP1-201ENST00000252597 CHMP4CQ96CF2 233 aa13.99□□□□□ -0.17
USHBP1-201ENST00000252597 TM6SF1Q9BZW5 370 aa13.99□□□□□ -0.17
USHBP1-201ENST00000252597 GOLPH3LQ9H4A5 285 aa13.99□□□□□ -0.17
USHBP1-201ENST00000252597 ADCY9O60503 1353 aa13.99□□□□□ -0.17
USHBP1-201ENST00000252597 NPHP4O75161 1426 aaPredicted RBP13.99□□□□□ -0.17
USHBP1-201ENST00000252597 ERCC6LQ2NKX8 1250 aa13.98□□□□□ -0.17
USHBP1-201ENST00000252597 LRRC8AQ8IWT6 810 aa13.98□□□□□ -0.17
USHBP1-201ENST00000252597 KIF18AQ8NI77 898 aa13.98□□□□□ -0.17
USHBP1-201ENST00000252597 NRKQ7Z2Y5 1582 aa13.98□□□□□ -0.17
USHBP1-201ENST00000252597 ADAMTSL3P82987 1691 aa13.98□□□□□ -0.17
USHBP1-201ENST00000252597 USP31Q70CQ4 1352 aa13.98□□□□□ -0.17
USHBP1-201ENST00000252597 RNMTO43148 476 aaKnown RBP13.98□□□□□ -0.17
USHBP1-201ENST00000252597 SERPINC1P01008 464 aa13.98□□□□□ -0.17
USHBP1-201ENST00000252597 TAF7LQ5H9L4 462 aa13.98□□□□□ -0.17
USHBP1-201ENST00000252597 ZBTB3Q9H5J0 574 aa13.98□□□□□ -0.17
USHBP1-201ENST00000252597 URI1O94763 535 aaPredicted RBP13.98□□□□□ -0.17
USHBP1-201ENST00000252597 ANKRD24Q8TF21 1146 aa13.98□□□□□ -0.17
USHBP1-201ENST00000252597 NRDCO43847 1150 aa13.97□□□□□ -0.17
USHBP1-201ENST00000252597 DNAI1Q9UI46 699 aa13.97□□□□□ -0.17
USHBP1-201ENST00000252597 SNW1Q13573 536 aaKnown RBP13.97□□□□□ -0.17
USHBP1-201ENST00000252597 SKIDA1Q1XH10 827 aa13.97□□□□□ -0.17
USHBP1-201ENST00000252597 ANO10Q9NW15 660 aa13.97□□□□□ -0.17
USHBP1-201ENST00000252597 VGLL3A8MV65 326 aa13.97□□□□□ -0.17
USHBP1-201ENST00000252597 SFPQP23246 707 aaKnown RBP eCLIP13.97□□□□□ -0.17
USHBP1-201ENST00000252597 CFAP100Q494V2 611 aa13.97□□□□□ -0.17
USHBP1-201ENST00000252597 SPECC1Q5M775 1068 aa13.97□□□□□ -0.17
USHBP1-201ENST00000252597 ANKRD13DQ6ZTN6 518 aa13.97□□□□□ -0.17
USHBP1-201ENST00000252597 MNS1Q8NEH6 495 aa13.97□□□□□ -0.17
USHBP1-201ENST00000252597 KAZALD1Q96I82 304 aa13.97□□□□□ -0.17
USHBP1-201ENST00000252597 IGKV5-2P06315 115 aa13.96□□□□□ -0.17
USHBP1-201ENST00000252597 KRT32Q14532 448 aa13.96□□□□□ -0.17
USHBP1-201ENST00000252597 CHRNA2Q15822 529 aa13.96□□□□□ -0.17
USHBP1-201ENST00000252597 MCMDC2Q4G0Z9 681 aa13.96□□□□□ -0.17
USHBP1-201ENST00000252597 EPC1Q9H2F5 836 aa13.96□□□□□ -0.17
USHBP1-201ENST00000252597 PEAK1Q9H792 1746 aa13.96□□□□□ -0.17
USHBP1-201ENST00000252597 DPCR1Q3MIW9 517 aa13.96□□□□□ -0.18
USHBP1-201ENST00000252597 TNNI3KQ59H18 835 aa13.96□□□□□ -0.18
USHBP1-201ENST00000252597 AKAP4Q5JQC9 854 aa13.96□□□□□ -0.18
USHBP1-201ENST00000252597 ZNF396Q96N95 335 aaPredicted RBP13.96□□□□□ -0.18
USHBP1-201ENST00000252597 FPGT-TNNI3KV9GXZ4 949 aa13.96□□□□□ -0.18
USHBP1-201ENST00000252597 ANKARQ7Z5J8 1434 aa13.96□□□□□ -0.18
USHBP1-201ENST00000252597 ALDH1L1O75891 902 aa13.95□□□□□ -0.18
USHBP1-201ENST00000252597 XPO4Q9C0E2 1151 aaKnown RBP13.95□□□□□ -0.18
USHBP1-201ENST00000252597 NAT10Q9H0A0 1025 aaKnown RBP13.95□□□□□ -0.18
USHBP1-201ENST00000252597 RESTQ13127 1097 aa13.95□□□□□ -0.18
USHBP1-201ENST00000252597 C8orf76Q96K31 380 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms