RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 SH2B1Q9NRF2 756 aaPredicted RBP22.37■■□□□ 1.17
SNX4-201ENST00000251775 CAMK4Q16566 473 aa22.37■■□□□ 1.17
SNX4-201ENST00000251775 ME3Q16798 604 aa22.37■■□□□ 1.17
SNX4-201ENST00000251775 ZNF589Q86UQ0 364 aaPredicted RBP22.37■■□□□ 1.17
SNX4-201ENST00000251775 ATP5JP18859 108 aa22.36■■□□□ 1.17
SNX4-201ENST00000251775 SYCP1Q15431 976 aa22.36■■□□□ 1.17
SNX4-201ENST00000251775 CHMP3Q9Y3E7 222 aa22.36■■□□□ 1.17
SNX4-201ENST00000251775 TAF6LQ9Y6J9 622 aa22.36■■□□□ 1.17
SNX4-201ENST00000251775 HSPA2P54652 639 aa22.35■■□□□ 1.17
SNX4-201ENST00000251775 C16orf45Q96MC5 204 aaPredicted RBP22.35■■□□□ 1.17
SNX4-201ENST00000251775 SMTNL1A8MU46 457 aa22.35■■□□□ 1.17
SNX4-201ENST00000251775 BRINP3Q76B58 766 aa22.35■■□□□ 1.17
SNX4-201ENST00000251775 CBX8Q9HC52 389 aa22.35■■□□□ 1.17
SNX4-201ENST00000251775 OGFRQ9NZT2 677 aa22.35■■□□□ 1.17
SNX4-201ENST00000251775 NRBP1Q9UHY1 535 aa22.35■■□□□ 1.17
SNX4-201ENST00000251775 TPCN1Q9ULQ1 816 aa22.35■■□□□ 1.17
SNX4-201ENST00000251775 NDUFB9Q9Y6M9 179 aa22.35■■□□□ 1.17
SNX4-201ENST00000251775 IGSF3O75054 1194 aa22.34■■□□□ 1.17
SNX4-201ENST00000251775 KRT85P78386 507 aa22.34■■□□□ 1.17
SNX4-201ENST00000251775 NECAB1Q8N987 351 aa22.34■■□□□ 1.17
SNX4-201ENST00000251775 ELP1O95163 1332 aa22.34■■□□□ 1.17
SNX4-201ENST00000251775 JCADQ9P266 1359 aa22.34■■□□□ 1.17
SNX4-201ENST00000251775 CTNNA3Q9UI47 895 aa22.34■■□□□ 1.17
SNX4-201ENST00000251775 WDR17Q8IZU2 1322 aa22.34■■□□□ 1.17
SNX4-201ENST00000251775 UBR2Q8IWV8 1755 aa22.34■■□□□ 1.17
SNX4-201ENST00000251775 ANO6Q4KMQ2 910 aa22.33■■□□□ 1.17
SNX4-201ENST00000251775 LMBR1LQ6UX01 489 aa22.33■■□□□ 1.17
SNX4-201ENST00000251775 ZCRB1Q8TBF4 217 aaKnown RBP22.33■■□□□ 1.17
SNX4-201ENST00000251775 DBNDD2Q9BQY9 259 aa22.33■■□□□ 1.17
SNX4-201ENST00000251775 FAM173BQ6P4H8 233 aa22.33■■□□□ 1.17
SNX4-201ENST00000251775 TTLL7Q6ZT98 887 aa22.33■■□□□ 1.17
SNX4-201ENST00000251775 TOM1L2Q6ZVM7 507 aa22.33■■□□□ 1.17
SNX4-201ENST00000251775 CDC37L1Q7L3B6 337 aa22.33■■□□□ 1.17
SNX4-201ENST00000251775 PLA2G4DQ86XP0 818 aa22.33■■□□□ 1.17
SNX4-201ENST00000251775 CKAP2LQ8IYA6 745 aa22.33■■□□□ 1.17
SNX4-201ENST00000251775 PRDM11Q9NQV5 511 aa22.33■■□□□ 1.17
SNX4-201ENST00000251775 PSMA5P28066 241 aa22.32■■□□□ 1.16
SNX4-201ENST00000251775 LARP1BQ659C4 914 aaKnown RBP22.32■■□□□ 1.16
SNX4-201ENST00000251775 ZSCAN25Q6NSZ9 544 aa22.32■■□□□ 1.16
SNX4-201ENST00000251775 NUP188Q5SRE5 1749 aa22.32■■□□□ 1.16
SNX4-201ENST00000251775 PCDH11XQ9BZA7 1347 aa22.32■■□□□ 1.16
SNX4-201ENST00000251775 PCDH11YQ9BZA8 1340 aa22.32■■□□□ 1.16
SNX4-201ENST00000251775 TAF5LO75529 589 aa22.32■■□□□ 1.16
SNX4-201ENST00000251775 ZNF75DP51815 510 aa22.32■■□□□ 1.16
SNX4-201ENST00000251775 FOXO4P98177 505 aa22.32■■□□□ 1.16
SNX4-201ENST00000251775 FERMT3Q86UX7 667 aa22.32■■□□□ 1.16
SNX4-201ENST00000251775 TCEANC2Q96MN5 208 aa22.32■■□□□ 1.16
SNX4-201ENST00000251775 H7C1W4 665 aa22.31■■□□□ 1.16
SNX4-201ENST00000251775 CHGBP05060 677 aa22.31■■□□□ 1.16
SNX4-201ENST00000251775 TNNT1P13805 278 aa22.31■■□□□ 1.16
SNX4-201ENST00000251775 RNF20Q5VTR2 975 aa22.31■■□□□ 1.16
SNX4-201ENST00000251775 DRC7Q8IY82 874 aa22.31■■□□□ 1.16
SNX4-201ENST00000251775 TNMDQ9H2S6 317 aa22.31■■□□□ 1.16
SNX4-201ENST00000251775 DACT1Q9NYF0 836 aa22.31■■□□□ 1.16
SNX4-201ENST00000251775 TJP1Q07157 1748 aa22.3■■□□□ 1.16
SNX4-201ENST00000251775 A1BGP04217 495 aa22.3■■□□□ 1.16
SNX4-201ENST00000251775 NAA30Q147X3 362 aaPredicted RBP22.3■■□□□ 1.16
SNX4-201ENST00000251775 BLOC1S2Q6QNY1 142 aa22.3■■□□□ 1.16
SNX4-201ENST00000251775 TRIM5Q9C035 493 aa22.3■■□□□ 1.16
SNX4-201ENST00000251775 KCPQ6ZWJ8 1503 aa22.29■■□□□ 1.16
SNX4-201ENST00000251775 A0A0U1RQG5 324 aaPredicted RBP22.29■■□□□ 1.16
SNX4-201ENST00000251775 RPS6KB1P23443 525 aa22.29■■□□□ 1.16
SNX4-201ENST00000251775 RBM43Q6ZSC3 357 aaKnown RBP22.29■■□□□ 1.16
SNX4-201ENST00000251775 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.29■■□□□ 1.16
SNX4-201ENST00000251775 TDRD7Q8NHU6 1098 aaKnown RBP22.29■■□□□ 1.16
SNX4-201ENST00000251775 DNAJC2Q99543 621 aaKnown RBP22.29■■□□□ 1.16
SNX4-201ENST00000251775 ZNF609O15014 1411 aa22.29■■□□□ 1.16
SNX4-201ENST00000251775 ERVV-2B6SEH9 535 aa22.28■■□□□ 1.16
SNX4-201ENST00000251775 TSGA10IPQ3SY00 556 aa22.28■■□□□ 1.16
SNX4-201ENST00000251775 USPL1Q5W0Q7 1092 aa22.28■■□□□ 1.16
SNX4-201ENST00000251775 HAUS7Q99871 368 aa22.28■■□□□ 1.16
SNX4-201ENST00000251775 PAXBP1Q9Y5B6 917 aa22.28■■□□□ 1.16
SNX4-201ENST00000251775 COL5A2P05997 1499 aaPredicted RBP22.28■■□□□ 1.16
SNX4-201ENST00000251775 DDX41Q9UJV9 622 aaKnown RBP22.28■■□□□ 1.16
SNX4-201ENST00000251775 PAPPAQ13219 1627 aa22.28■■□□□ 1.16
SNX4-201ENST00000251775 TOB2Q14106 344 aaPredicted RBP22.27■■□□□ 1.16
SNX4-201ENST00000251775 CCDC129Q6ZRS4 1044 aa22.27■■□□□ 1.16
SNX4-201ENST00000251775 CACTINQ8WUQ7 758 aaKnown RBP22.27■■□□□ 1.16
SNX4-201ENST00000251775 SEC62Q99442 399 aaKnown RBP22.27■■□□□ 1.16
SNX4-201ENST00000251775 CWC25Q9NXE8 425 aaPredicted RBP22.27■■□□□ 1.16
SNX4-201ENST00000251775 HMG20BQ9P0W2 317 aa22.27■■□□□ 1.16
SNX4-201ENST00000251775 CGNQ9P2M7 1197 aaKnown RBP22.27■■□□□ 1.16
SNX4-201ENST00000251775 SHANK3Q9BYB0 1731 aa22.27■■□□□ 1.16
SNX4-201ENST00000251775 ATG9AQ7Z3C6 839 aa22.27■■□□□ 1.16
SNX4-201ENST00000251775 ALDH8A1Q9H2A2 487 aaPredicted RBP22.27■■□□□ 1.16
SNX4-201ENST00000251775 DDX19AQ9NUU7 478 aaKnown RBP22.27■■□□□ 1.16
SNX4-201ENST00000251775 CCDC9Q9Y3X0 531 aaKnown RBP22.27■■□□□ 1.16
SNX4-201ENST00000251775 PDIA4P13667 645 aaKnown RBP22.26■■□□□ 1.15
SNX4-201ENST00000251775 DDX46Q7L014 1031 aaKnown RBP22.26■■□□□ 1.15
SNX4-201ENST00000251775 CCDC112Q8NEF3 446 aa22.26■■□□□ 1.15
SNX4-201ENST00000251775 CLSTN2Q9H4D0 955 aa22.26■■□□□ 1.15
SNX4-201ENST00000251775 ZBTB3Q9H5J0 574 aa22.26■■□□□ 1.15
SNX4-201ENST00000251775 RFX7Q2KHR2 1363 aa22.26■■□□□ 1.15
SNX4-201ENST00000251775 NKX1-1Q15270 411 aaPredicted RBP22.26■■□□□ 1.15
SNX4-201ENST00000251775 CCDC144BQ3MJ40 725 aa22.26■■□□□ 1.15
SNX4-201ENST00000251775 CCDC144CPQ8IYA2 1237 aa22.26■■□□□ 1.15
SNX4-201ENST00000251775 ANKRD1Q15327 319 aa22.25■■□□□ 1.15
SNX4-201ENST00000251775 SCAND2PQ9GZW5 306 aaPredicted RBP22.25■■□□□ 1.15
SNX4-201ENST00000251775 PDCP20941 246 aa22.25■■□□□ 1.15
SNX4-201ENST00000251775 GABPB1Q06547 395 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms