RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 MCMDC2Q4G0Z9 681 aa17.64■□□□□ 0.42
MBD4-201ENST00000249910 EIF5P55010 431 aaKnown RBP17.64■□□□□ 0.41
MBD4-201ENST00000249910 ME3Q16798 604 aa17.64■□□□□ 0.41
MBD4-201ENST00000249910 SMIM5Q71RC9 77 aa17.64■□□□□ 0.41
MBD4-201ENST00000249910 PLA2G12BQ9BX93 195 aa17.64■□□□□ 0.41
MBD4-201ENST00000249910 UBAP1LF5GYI3 381 aa17.63■□□□□ 0.41
MBD4-201ENST00000249910 XRCC6P12956 609 aaKnown RBP eCLIP17.63■□□□□ 0.41
MBD4-201ENST00000249910 CTSWP56202 376 aa17.63■□□□□ 0.41
MBD4-201ENST00000249910 HSP90AB3PQ58FF7 597 aa17.63■□□□□ 0.41
MBD4-201ENST00000249910 PTF1AQ7RTS3 328 aa17.63■□□□□ 0.41
MBD4-201ENST00000249910 GAS2L3Q86XJ1 694 aa17.63■□□□□ 0.41
MBD4-201ENST00000249910 NGLY1Q96IV0 654 aa17.63■□□□□ 0.41
MBD4-201ENST00000249910 GDPD2Q9HCC8 539 aa17.63■□□□□ 0.41
MBD4-201ENST00000249910 TPCN1Q9ULQ1 816 aa17.63■□□□□ 0.41
MBD4-201ENST00000249910 METTL24Q5JXM2 366 aa17.63■□□□□ 0.41
MBD4-201ENST00000249910 PANK2Q9BZ23 570 aa17.63■□□□□ 0.41
MBD4-201ENST00000249910 TM6SF1Q9BZW5 370 aa17.63■□□□□ 0.41
MBD4-201ENST00000249910 COL22A1Q8NFW1 1626 aaPredicted RBP17.63■□□□□ 0.41
MBD4-201ENST00000249910 GOLGB1Q14789 3259 aaKnown RBP17.63■□□□□ 0.41
MBD4-201ENST00000249910 A0A0G2JLW4 131 aa17.62■□□□□ 0.41
MBD4-201ENST00000249910 FSD2A1L4K1 749 aa17.62■□□□□ 0.41
MBD4-201ENST00000249910 SKOR2Q2VWA4 1001 aaPredicted RBP17.62■□□□□ 0.41
MBD4-201ENST00000249910 RNF20Q5VTR2 975 aa17.62■□□□□ 0.41
MBD4-201ENST00000249910 CNNM1Q9NRU3 951 aa17.62■□□□□ 0.41
MBD4-201ENST00000249910 CCDC87Q9NVE4 849 aa17.62■□□□□ 0.41
MBD4-201ENST00000249910 RIPOR2Q9Y4F9 1068 aa17.62■□□□□ 0.41
MBD4-201ENST00000249910 A0A0U1RQG5 324 aaPredicted RBP17.62■□□□□ 0.41
MBD4-201ENST00000249910 SNAP23O00161 211 aa17.62■□□□□ 0.41
MBD4-201ENST00000249910 CYP21A2P08686 494 aa17.62■□□□□ 0.41
MBD4-201ENST00000249910 FAM182BQ5T319 152 aa17.62■□□□□ 0.41
MBD4-201ENST00000249910 SUSD4Q5VX71 490 aa17.62■□□□□ 0.41
MBD4-201ENST00000249910 HELBQ8NG08 1087 aaPredicted RBP17.62■□□□□ 0.41
MBD4-201ENST00000249910 PHLPP1O60346 1717 aa17.61■□□□□ 0.41
MBD4-201ENST00000249910 ST3GAL1Q11201 340 aa17.61■□□□□ 0.41
MBD4-201ENST00000249910 CCDC158Q5M9N0 1113 aa17.61■□□□□ 0.41
MBD4-201ENST00000249910 TTC39AQ5SRH9 613 aa17.61■□□□□ 0.41
MBD4-201ENST00000249910 BLOC1S2Q6QNY1 142 aa17.61■□□□□ 0.41
MBD4-201ENST00000249910 ERVV-1B6SEH8 477 aa17.61■□□□□ 0.41
MBD4-201ENST00000249910 KLHL40Q2TBA0 621 aa17.61■□□□□ 0.41
MBD4-201ENST00000249910 CAVIN1Q6NZI2 390 aaKnown RBP17.61■□□□□ 0.41
MBD4-201ENST00000249910 ZNF34Q8IZ26 560 aa17.61■□□□□ 0.41
MBD4-201ENST00000249910 NSFL1CQ9UNZ2 370 aaKnown RBP17.61■□□□□ 0.41
MBD4-201ENST00000249910 ANKRD18BA2A2Z9 1011 aa17.6■□□□□ 0.41
MBD4-201ENST00000249910 TPRNQ4KMQ1 711 aa17.6■□□□□ 0.41
MBD4-201ENST00000249910 RPAP1Q9BWH6 1393 aaPredicted RBP17.6■□□□□ 0.41
MBD4-201ENST00000249910 CDHR2Q9BYE9 1310 aa17.6■□□□□ 0.41
MBD4-201ENST00000249910 SMC3Q9UQE7 1217 aa17.6■□□□□ 0.41
MBD4-201ENST00000249910 SYT1P21579 422 aa17.6■□□□□ 0.41
MBD4-201ENST00000249910 PSMA5P28066 241 aa17.6■□□□□ 0.41
MBD4-201ENST00000249910 STK3Q13188 491 aa17.6■□□□□ 0.41
MBD4-201ENST00000249910 USPL1Q5W0Q7 1092 aa17.6■□□□□ 0.41
MBD4-201ENST00000249910 GPT2Q8TD30 523 aa17.6■□□□□ 0.41
MBD4-201ENST00000249910 LRRC2Q9BYS8 371 aa17.6■□□□□ 0.41
MBD4-201ENST00000249910 AKAP2Q9Y2D5 859 aa17.6■□□□□ 0.41
MBD4-201ENST00000249910 PALLDQ8WX93 1383 aa17.59■□□□□ 0.41
MBD4-201ENST00000249910 ZAP70P43403 619 aa17.59■□□□□ 0.41
MBD4-201ENST00000249910 PDE8AO60658 829 aa17.59■□□□□ 0.41
MBD4-201ENST00000249910 GJB2P29033 226 aa17.59■□□□□ 0.41
MBD4-201ENST00000249910 RBM10P98175 930 aaKnown RBP17.59■□□□□ 0.41
MBD4-201ENST00000249910 ATP2B3Q16720 1220 aa17.59■□□□□ 0.41
MBD4-201ENST00000249910 BARGINQ6ZT62 677 aa17.59■□□□□ 0.41
MBD4-201ENST00000249910 OSBP2Q969R2 916 aa17.59■□□□□ 0.41
MBD4-201ENST00000249910 RBM27Q9P2N5 1060 aaKnown RBP17.59■□□□□ 0.41
MBD4-201ENST00000249910 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.59■□□□□ 0.41
MBD4-201ENST00000249910 PLCH1Q4KWH8 1693 aa17.59■□□□□ 0.41
MBD4-201ENST00000249910 DOT1LQ8TEK3 1739 aa17.58■□□□□ 0.41
MBD4-201ENST00000249910 RPS6KB1P23443 525 aa17.58■□□□□ 0.41
MBD4-201ENST00000249910 TOB2Q14106 344 aaPredicted RBP17.58■□□□□ 0.41
MBD4-201ENST00000249910 SEC31BQ9NQW1 1179 aa17.58■□□□□ 0.41
MBD4-201ENST00000249910 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.4
MBD4-201ENST00000249910 LRP6O75581 1613 aa17.58■□□□□ 0.4
MBD4-201ENST00000249910 ZMYM1Q5SVZ6 1142 aa17.58■□□□□ 0.4
MBD4-201ENST00000249910 CAMTA2O94983 1202 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 HSPD1P10809 573 aaKnown RBP17.57■□□□□ 0.4
MBD4-201ENST00000249910 PTMSP20962 102 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 HMG20BQ9P0W2 317 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 NIP7Q9Y221 180 aaKnown RBP eCLIP17.57■□□□□ 0.4
MBD4-201ENST00000249910 JCADQ9P266 1359 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 MAST3O60307 1309 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 SH3TC1Q8TE82 1336 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 M0R2C6 588 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 RNF113AO15541 343 aaKnown RBP17.57■□□□□ 0.4
MBD4-201ENST00000249910 STX6O43752 255 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 WASHC4Q2M389 1173 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 L1TD1Q5T7N2 865 aaKnown RBP17.57■□□□□ 0.4
MBD4-201ENST00000249910 TTLL5Q6EMB2 1281 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 STOX1Q6ZVD7 989 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 NEK1Q96PY6 1258 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 FBXO3Q9UK99 471 aa17.57■□□□□ 0.4
MBD4-201ENST00000249910 SLIT2O94813 1529 aa17.56■□□□□ 0.4
MBD4-201ENST00000249910 WDR33Q9C0J8 1336 aaKnown RBP17.56■□□□□ 0.4
MBD4-201ENST00000249910 MCAMP43121 646 aa17.56■□□□□ 0.4
MBD4-201ENST00000249910 TSGA10IPQ3SY00 556 aa17.56■□□□□ 0.4
MBD4-201ENST00000249910 VGLL2Q8N8G2 317 aa17.56■□□□□ 0.4
MBD4-201ENST00000249910 HELLSQ9NRZ9 838 aa17.56■□□□□ 0.4
MBD4-201ENST00000249910 U3KPZ7 1027 aaPredicted RBP17.56■□□□□ 0.4
MBD4-201ENST00000249910 RIC1Q4ADV7 1423 aa17.55■□□□□ 0.4
MBD4-201ENST00000249910 PDE8BO95263 885 aa17.55■□□□□ 0.4
MBD4-201ENST00000249910 GRPEL1Q9HAV7 217 aa17.55■□□□□ 0.4
MBD4-201ENST00000249910 SH2B1Q9NRF2 756 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms