RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 DBNDD2Q9BQY9 259 aa28.29■■■□□ 2.12
SYNGR3-201ENST00000248121 SSFA2P28290 1259 aa28.28■■■□□ 2.12
SYNGR3-201ENST00000248121 NFIXQ14938 502 aa28.28■■■□□ 2.12
SYNGR3-201ENST00000248121 RAD50Q92878 1312 aa28.28■■■□□ 2.12
SYNGR3-201ENST00000248121 GYS1P13807 737 aa28.28■■■□□ 2.12
SYNGR3-201ENST00000248121 DIAPH3Q9NSV4 1193 aa28.28■■■□□ 2.12
SYNGR3-201ENST00000248121 HSPA4P34932 840 aa28.27■■■□□ 2.12
SYNGR3-201ENST00000248121 ANAPC15P60006 121 aa28.27■■■□□ 2.12
SYNGR3-201ENST00000248121 AKT1S1Q96B36 256 aa28.27■■■□□ 2.12
SYNGR3-201ENST00000248121 ATP5JP18859 108 aa28.27■■■□□ 2.12
SYNGR3-201ENST00000248121 MCCP23508 829 aa28.27■■■□□ 2.12
SYNGR3-201ENST00000248121 TIMM10P62072 90 aa28.27■■■□□ 2.12
SYNGR3-201ENST00000248121 NBPF5PQ86XG9 351 aaPredicted RBP28.27■■■□□ 2.12
SYNGR3-201ENST00000248121 RIPOR2Q9Y4F9 1068 aa28.27■■■□□ 2.12
SYNGR3-201ENST00000248121 LDHAL6AQ6ZMR3 332 aa28.25■■■□□ 2.11
SYNGR3-201ENST00000248121 ST18O60284 1047 aa28.24■■■□□ 2.11
SYNGR3-201ENST00000248121 EDC3Q96F86 508 aaKnown RBP28.24■■■□□ 2.11
SYNGR3-201ENST00000248121 GPR108Q9NPR9 543 aa28.24■■■□□ 2.11
SYNGR3-201ENST00000248121 FOXD4L1Q9NU39 408 aa28.24■■■□□ 2.11
SYNGR3-201ENST00000248121 TFCP2L1Q9NZI6 479 aa28.23■■■□□ 2.11
SYNGR3-201ENST00000248121 A0A1B0GUL6 1792 aa28.23■■■□□ 2.11
SYNGR3-201ENST00000248121 GTF2E1P29083 439 aaPredicted RBP28.23■■■□□ 2.11
SYNGR3-201ENST00000248121 EN1Q05925 392 aaPredicted RBP28.23■■■□□ 2.11
SYNGR3-201ENST00000248121 EZH2Q15910 746 aaKnown RBP28.23■■■□□ 2.11
SYNGR3-201ENST00000248121 CCDC152Q4G0S7 254 aa28.23■■■□□ 2.11
SYNGR3-201ENST00000248121 NEUROD6Q96NK8 337 aa28.23■■■□□ 2.11
SYNGR3-201ENST00000248121 NDUFB9Q9Y6M9 179 aa28.23■■■□□ 2.11
SYNGR3-201ENST00000248121 A0A1B0GUL7 405 aa28.22■■■□□ 2.11
SYNGR3-201ENST00000248121 RUFY2Q8WXA3 655 aa28.22■■■□□ 2.11
SYNGR3-201ENST00000248121 FAM227BQ96M60 508 aa28.22■■■□□ 2.11
SYNGR3-201ENST00000248121 CNNM1Q9NRU3 951 aa28.22■■■□□ 2.11
SYNGR3-201ENST00000248121 CARMIL3Q8ND23 1372 aa28.22■■■□□ 2.11
SYNGR3-201ENST00000248121 NEK4P51957 841 aa28.22■■■□□ 2.11
SYNGR3-201ENST00000248121 CEP126Q9P2H0 1117 aa28.22■■■□□ 2.11
SYNGR3-201ENST00000248121 FBXO3Q9UK99 471 aa28.22■■■□□ 2.11
SYNGR3-201ENST00000248121 VGLL2Q8N8G2 317 aa28.21■■■□□ 2.11
SYNGR3-201ENST00000248121 NYXQ9GZU5 481 aa28.21■■■□□ 2.11
SYNGR3-201ENST00000248121 RTL9Q8NET4 1388 aa28.21■■■□□ 2.11
SYNGR3-201ENST00000248121 ADORA1P30542 326 aa28.2■■■□□ 2.11
SYNGR3-201ENST00000248121 PTH1RQ03431 593 aa28.2■■■□□ 2.11
SYNGR3-201ENST00000248121 NMIQ13287 307 aaPredicted RBP28.2■■■□□ 2.11
SYNGR3-201ENST00000248121 COL23A1Q86Y22 540 aaPredicted RBP28.2■■■□□ 2.11
SYNGR3-201ENST00000248121 FSD1Q9BTV5 496 aa28.2■■■□□ 2.11
SYNGR3-201ENST00000248121 HSP90AA1P07900 732 aaKnown RBP28.2■■■□□ 2.1
SYNGR3-201ENST00000248121 METTL24Q5JXM2 366 aa28.2■■■□□ 2.1
SYNGR3-201ENST00000248121 SLC10A5Q5PT55 438 aa28.2■■■□□ 2.1
SYNGR3-201ENST00000248121 ANO8Q9HCE9 1232 aaPredicted RBP28.2■■■□□ 2.1
SYNGR3-201ENST00000248121 HELBQ8NG08 1087 aaPredicted RBP28.19■■■□□ 2.1
SYNGR3-201ENST00000248121 SNRKQ9NRH2 765 aa28.19■■■□□ 2.1
SYNGR3-201ENST00000248121 HIP1O00291 1037 aa28.19■■■□□ 2.1
SYNGR3-201ENST00000248121 KIAA1211Q6ZU35 1233 aa28.19■■■□□ 2.1
SYNGR3-201ENST00000248121 HAUS7Q99871 368 aa28.19■■■□□ 2.1
SYNGR3-201ENST00000248121 CIZ1Q9ULV3 898 aaPredicted RBP28.19■■■□□ 2.1
SYNGR3-201ENST00000248121 A0A0D9SFI3 127 aa28.18■■■□□ 2.1
SYNGR3-201ENST00000248121 SF3B3Q15393 1217 aaKnown RBP28.18■■■□□ 2.1
SYNGR3-201ENST00000248121 TPTE2Q6XPS3 522 aa28.18■■■□□ 2.1
SYNGR3-201ENST00000248121 CAMKK2Q96RR4 588 aa28.18■■■□□ 2.1
SYNGR3-201ENST00000248121 DDR1Q08345 913 aa28.17■■■□□ 2.1
SYNGR3-201ENST00000248121 RASEFQ8IZ41 740 aa28.17■■■□□ 2.1
SYNGR3-201ENST00000248121 SNX14Q9Y5W7 946 aa28.17■■■□□ 2.1
SYNGR3-201ENST00000248121 SNAP23O00161 211 aa28.17■■■□□ 2.1
SYNGR3-201ENST00000248121 ARAP2Q8WZ64 1704 aa28.16■■■□□ 2.1
SYNGR3-201ENST00000248121 PNPLA7Q6ZV29 1317 aa28.16■■■□□ 2.1
SYNGR3-201ENST00000248121 HSP90B1P14625 803 aaKnown RBP28.15■■■□□ 2.1
SYNGR3-201ENST00000248121 TM4SF1P30408 202 aa28.15■■■□□ 2.1
SYNGR3-201ENST00000248121 PRR5LQ6MZQ0 368 aa28.15■■■□□ 2.1
SYNGR3-201ENST00000248121 UPF3BQ9BZI7 483 aaKnown RBP28.15■■■□□ 2.1
SYNGR3-201ENST00000248121 MED23Q9ULK4 1368 aa28.15■■■□□ 2.1
SYNGR3-201ENST00000248121 CCDC171Q6TFL3 1326 aa28.14■■■□□ 2.1
SYNGR3-201ENST00000248121 TAF5LO75529 589 aa28.14■■■□□ 2.1
SYNGR3-201ENST00000248121 DEFB132Q7Z7B7 95 aa28.14■■■□□ 2.1
SYNGR3-201ENST00000248121 CNBD1Q8NA66 436 aa28.14■■■□□ 2.1
SYNGR3-201ENST00000248121 CELF1Q92879 486 aaKnown RBP28.14■■■□□ 2.1
SYNGR3-201ENST00000248121 XAGE2Q96GT9 111 aa28.14■■■□□ 2.1
SYNGR3-201ENST00000248121 DNAJC2Q99543 621 aaKnown RBP28.14■■■□□ 2.1
SYNGR3-201ENST00000248121 MPHOSPH8Q99549 860 aa28.14■■■□□ 2.1
SYNGR3-201ENST00000248121 NPHP1O15259 732 aa28.14■■■□□ 2.09
SYNGR3-201ENST00000248121 SLC51AQ86UW1 340 aa28.14■■■□□ 2.09
SYNGR3-201ENST00000248121 ATP2B3Q16720 1220 aa28.13■■■□□ 2.09
SYNGR3-201ENST00000248121 PDE8BO95263 885 aa28.12■■■□□ 2.09
SYNGR3-201ENST00000248121 RAB3GAP1Q15042 981 aa28.12■■■□□ 2.09
SYNGR3-201ENST00000248121 NLRP3Q96P20 1036 aa28.12■■■□□ 2.09
SYNGR3-201ENST00000248121 CHGBP05060 677 aa28.12■■■□□ 2.09
SYNGR3-201ENST00000248121 SERPINB2P05120 415 aa28.12■■■□□ 2.09
SYNGR3-201ENST00000248121 IGHMBP2P38935 993 aaKnown RBP28.12■■■□□ 2.09
SYNGR3-201ENST00000248121 RFX7Q2KHR2 1363 aa28.11■■■□□ 2.09
SYNGR3-201ENST00000248121 POLRMTO00411 1230 aaKnown RBP28.11■■■□□ 2.09
SYNGR3-201ENST00000248121 ZNF589Q86UQ0 364 aaPredicted RBP28.11■■■□□ 2.09
SYNGR3-201ENST00000248121 KCNB2Q92953 911 aa28.11■■■□□ 2.09
SYNGR3-201ENST00000248121 AKAP2Q9Y2D5 859 aa28.11■■■□□ 2.09
SYNGR3-201ENST00000248121 ANKRD31Q8N7Z5 1873 aa28.11■■■□□ 2.09
SYNGR3-201ENST00000248121 AKAP11Q9UKA4 1901 aa28.11■■■□□ 2.09
SYNGR3-201ENST00000248121 NECTIN1Q15223 517 aa28.11■■■□□ 2.09
SYNGR3-201ENST00000248121 DDX46Q7L014 1031 aaKnown RBP28.11■■■□□ 2.09
SYNGR3-201ENST00000248121 MAP4K1Q92918 833 aa28.11■■■□□ 2.09
SYNGR3-201ENST00000248121 TMX3Q96JJ7 454 aa28.11■■■□□ 2.09
SYNGR3-201ENST00000248121 MROH5Q6ZUA9 1318 aa28.1■■■□□ 2.09
SYNGR3-201ENST00000248121 MCM2P49736 904 aa28.09■■■□□ 2.09
SYNGR3-201ENST00000248121 ZGPATQ8N5A5 531 aaKnown RBP28.09■■■□□ 2.09
SYNGR3-201ENST00000248121 TNPO1Q92973 898 aaKnown RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms