RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 SMIM5Q71RC9 77 aa13.45□□□□□ -0.26
SOX9-201ENST00000245479 NUP133Q8WUM0 1156 aa13.45□□□□□ -0.26
SOX9-201ENST00000245479 SKILP12757 684 aa13.45□□□□□ -0.26
SOX9-201ENST00000245479 DNAJC25Q9H1X3 360 aa13.45□□□□□ -0.26
SOX9-201ENST00000245479 ATP7BP35670 1465 aa13.44□□□□□ -0.26
SOX9-201ENST00000245479 ARHGAP31Q2M1Z3 1444 aa13.44□□□□□ -0.26
SOX9-201ENST00000245479 ATP10DQ9P241 1426 aa13.44□□□□□ -0.26
SOX9-201ENST00000245479 CCP110O43303 1012 aa13.44□□□□□ -0.26
SOX9-201ENST00000245479 IGKV5-2P06315 115 aa13.44□□□□□ -0.26
SOX9-201ENST00000245479 LSG1Q9H089 658 aaKnown RBP13.44□□□□□ -0.26
SOX9-201ENST00000245479 RAD50Q92878 1312 aa13.44□□□□□ -0.26
SOX9-201ENST00000245479 COL3A1P02461 1466 aaPredicted RBP13.44□□□□□ -0.26
SOX9-201ENST00000245479 LIG1P18858 919 aa13.44□□□□□ -0.26
SOX9-201ENST00000245479 LDHAL6AQ6ZMR3 332 aa13.44□□□□□ -0.26
SOX9-201ENST00000245479 MYL10Q9BUA6 226 aa13.44□□□□□ -0.26
SOX9-201ENST00000245479 ACBD3Q9H3P7 528 aa13.44□□□□□ -0.26
SOX9-201ENST00000245479 DBNLQ9UJU6 430 aaKnown RBP13.44□□□□□ -0.26
SOX9-201ENST00000245479 VWDEQ8N2E2 1590 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 PTPRUQ92729 1446 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 ARAP3Q8WWN8 1544 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 NEURL1BA8MQ27 555 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 SNW1Q13573 536 aaKnown RBP13.43□□□□□ -0.26
SOX9-201ENST00000245479 MICU3Q86XE3 530 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 GTF3C6Q969F1 213 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 PDLIM2Q96JY6 352 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 ZKSCAN3Q9BRR0 538 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 CDK12Q9NYV4 1490 aaPredicted RBP13.43□□□□□ -0.26
SOX9-201ENST00000245479 SERPINC1P01008 464 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 MARCKSP29966 332 aaPredicted RBP13.43□□□□□ -0.26
SOX9-201ENST00000245479 INTS4Q96HW7 963 aaKnown RBP13.43□□□□□ -0.26
SOX9-201ENST00000245479 DEF6Q9H4E7 631 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 TRMT112Q9UI30 125 aaKnown RBP13.43□□□□□ -0.26
SOX9-201ENST00000245479 MYO5BQ9ULV0 1848 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 NEMFO60524 1076 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 TYRO3Q06418 890 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 TRDNQ13061 729 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 CCDC158Q5M9N0 1113 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 ARHGEF25Q86VW2 580 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 DDX19AQ9NUU7 478 aaKnown RBP13.43□□□□□ -0.26
SOX9-201ENST00000245479 CRB1P82279 1406 aa13.43□□□□□ -0.26
SOX9-201ENST00000245479 RAD21O60216 631 aa13.42□□□□□ -0.26
SOX9-201ENST00000245479 SLU7O95391 586 aaKnown RBP13.42□□□□□ -0.26
SOX9-201ENST00000245479 PDIA4P13667 645 aaKnown RBP13.42□□□□□ -0.26
SOX9-201ENST00000245479 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
SOX9-201ENST00000245479 PES1O00541 588 aaKnown RBP13.42□□□□□ -0.26
SOX9-201ENST00000245479 STK38Q15208 465 aa13.42□□□□□ -0.26
SOX9-201ENST00000245479 ATP2B3Q16720 1220 aa13.42□□□□□ -0.26
SOX9-201ENST00000245479 SIGLEC1Q9BZZ2 1709 aa13.42□□□□□ -0.26
SOX9-201ENST00000245479 TMOD3Q9NYL9 352 aa13.42□□□□□ -0.26
SOX9-201ENST00000245479 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
SOX9-201ENST00000245479 SETBP1Q9Y6X0 1596 aa13.42□□□□□ -0.26
SOX9-201ENST00000245479 ARHGEF10O15013 1369 aa13.42□□□□□ -0.26
SOX9-201ENST00000245479 NOC3LQ8WTT2 800 aaKnown RBP13.42□□□□□ -0.26
SOX9-201ENST00000245479 SLC52A2Q9HAB3 445 aa13.42□□□□□ -0.26
SOX9-201ENST00000245479 MINDY4BA8MYZ0 360 aa13.41□□□□□ -0.26
SOX9-201ENST00000245479 TAF5LO75529 589 aa13.41□□□□□ -0.26
SOX9-201ENST00000245479 CMTR1Q8N1G2 835 aaKnown RBP13.41□□□□□ -0.26
SOX9-201ENST00000245479 CCDC34Q96HJ3 373 aa13.41□□□□□ -0.26
SOX9-201ENST00000245479 CFAP45Q9UL16 551 aa13.41□□□□□ -0.26
SOX9-201ENST00000245479 LMAN1P49257 510 aa13.41□□□□□ -0.26
SOX9-201ENST00000245479 IRX3P78415 501 aaPredicted RBP13.41□□□□□ -0.26
SOX9-201ENST00000245479 TNNI3KQ59H18 835 aa13.41□□□□□ -0.26
SOX9-201ENST00000245479 VPS37DQ86XT2 251 aa13.41□□□□□ -0.26
SOX9-201ENST00000245479 FPGT-TNNI3KV9GXZ4 949 aa13.41□□□□□ -0.26
SOX9-201ENST00000245479 H0YHG0 523 aa13.41□□□□□ -0.26
SOX9-201ENST00000245479 ANAPC15P60006 121 aa13.41□□□□□ -0.26
SOX9-201ENST00000245479 ZCRB1Q8TBF4 217 aaKnown RBP13.41□□□□□ -0.26
SOX9-201ENST00000245479 hCG_1642624A0A1W2PR95 340 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 TPM1P09493 284 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 ADORA1P30542 326 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 PAXIP1Q6ZW49 1069 aaPredicted RBP13.4□□□□□ -0.26
SOX9-201ENST00000245479 DNAJC10Q8IXB1 793 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 INCENPQ9NQS7 918 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 CWC25Q9NXE8 425 aaPredicted RBP13.4□□□□□ -0.26
SOX9-201ENST00000245479 PYCARDQ9ULZ3 195 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 LMTK2Q8IWU2 1503 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 CYP27B1O15528 508 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 ANKRD1Q15327 319 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 SPECC1Q5M775 1068 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 KIF6Q6ZMV9 814 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 C19orf44Q9H6X5 657 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 SH2B1Q9NRF2 756 aaPredicted RBP13.4□□□□□ -0.26
SOX9-201ENST00000245479 CLTCQ00610 1675 aaKnown RBP13.4□□□□□ -0.26
SOX9-201ENST00000245479 A0A1B0GUL7 405 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.26
SOX9-201ENST00000245479 TTC6Q86TZ1 520 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 MIGA1Q8NAN2 632 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 PRDM4Q9UKN5 801 aa13.4□□□□□ -0.26
SOX9-201ENST00000245479 CEP170BQ9Y4F5 1589 aaPredicted RBP13.4□□□□□ -0.27
SOX9-201ENST00000245479 NPHP3Q7Z494 1330 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 C10orf67Q8IYJ2 551 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 CCDC102AQ96A19 550 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 GOLGA8BA8MQT2 603 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 IFIT5Q13325 482 aaKnown RBP13.39□□□□□ -0.27
SOX9-201ENST00000245479 FAM182BQ5T319 152 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 ASAP1Q9ULH1 1129 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 PPLO60437 1756 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 A0A1B0GVL5 298 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 ALDH1L1O75891 902 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms