RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 TAF3Q5VWG9 929 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 LIG1P18858 919 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 KIAA0753Q2KHM9 967 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 UVSSAQ2YD98 709 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 GLT8D2Q9H1C3 349 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 PUF60Q9UHX1 559 aaKnown RBP8.38□□□□□ -1.07
SSR1-201ENST00000244763 PSMA7O14818 248 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 CKAP4Q07065 602 aaKnown RBP8.38□□□□□ -1.07
SSR1-201ENST00000244763 TTC6Q86TZ1 520 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 RRP36Q96EU6 259 aaKnown RBP8.38□□□□□ -1.07
SSR1-201ENST00000244763 MACROD2A1Z1Q3 448 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 CAMK4Q16566 473 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 TFCP2L1Q9NZI6 479 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 TRIM27P14373 513 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 MAST3O60307 1309 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 SYCE3A1L190 88 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 RHPN1Q8TCX5 695 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 ASXL1Q8IXJ9 1541 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 GJB2P29033 226 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 HS2ST1Q7LGA3 356 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 LMBR1Q8WVP7 490 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 RBM17Q96I25 401 aaKnown RBP8.37□□□□□ -1.07
SSR1-201ENST00000244763 RBM28Q9NW13 759 aaKnown RBP8.37□□□□□ -1.07
SSR1-201ENST00000244763 PLCH2O75038 1416 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 PDE6BP35913 854 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 COPS6Q7L5N1 327 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 C8orf37Q96NL8 207 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 BABAM1Q9NWV8 329 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 CLIP2Q9UDT6 1046 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 CCDC117Q8IWD4 279 aaPredicted RBP8.37□□□□□ -1.07
SSR1-201ENST00000244763 PARP10Q53GL7 1025 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 CCDC155Q8N6L0 562 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 SIRT1Q96EB6 747 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 SYKP43405 635 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 ZSCAN30Q86W11 494 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 TRIM47Q96LD4 638 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 PLCD4Q9BRC7 762 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 ALG1Q9BT22 464 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 HLTFQ14527 1009 aaKnown RBP eCLIP8.37□□□□□ -1.07
SSR1-201ENST00000244763 SUPT20HQ8NEM7 779 aa8.37□□□□□ -1.07
SSR1-201ENST00000244763 URB2Q14146 1524 aaKnown RBP8.36□□□□□ -1.07
SSR1-201ENST00000244763 PPIP5K1Q6PFW1 1433 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 CCDC175P0C221 793 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 CHRNA2Q15822 529 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 KIAA1524Q8TCG1 905 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 SPAG5Q96R06 1193 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 TMOD4Q9NZQ9 345 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 ATP2A1O14983 1001 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 SPECC1LQ69YQ0 1117 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 LINS1Q8NG48 757 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 XAGE3Q8WTP9 111 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 TCHPQ9BT92 498 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 DENND2AQ9ULE3 1009 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 TTC41PQ6P2S7 1318 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 PCDH11XQ9BZA7 1347 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 PCDH11YQ9BZA8 1340 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 BICDL2A1A5D9 508 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 C6orf163Q5TEZ5 329 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 FLT4P35916 1363 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 LDHBP07195 334 aaKnown RBP8.36□□□□□ -1.07
SSR1-201ENST00000244763 NAPAP54920 295 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 HDAC1Q13547 482 aaPredicted RBP8.36□□□□□ -1.07
SSR1-201ENST00000244763 KRT79Q5XKE5 535 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 MBIPQ9NS73 344 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 KLF18A0A0U1RQI7 1052 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 TUBB4AP04350 444 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 TRAPPC3LQ5T215 181 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 RIMS2Q9UQ26 1411 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 CCDC14Q49A88 953 aa8.36□□□□□ -1.07
SSR1-201ENST00000244763 ESPNB1AK53 854 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 SNX16P57768 344 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 CA8P35219 290 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 PRPF4BQ13523 1007 aaKnown RBP8.35□□□□□ -1.07
SSR1-201ENST00000244763 KCNG1Q9UIX4 513 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 POLR3GO15318 223 aaPredicted RBP8.35□□□□□ -1.07
SSR1-201ENST00000244763 TTC22Q5TAA0 569 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 ATL3Q6DD88 541 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 HEATR3Q7Z4Q2 680 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 SNRKQ9NRH2 765 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 STK32BQ9NY57 414 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 NSFL1CQ9UNZ2 370 aaKnown RBP8.35□□□□□ -1.07
SSR1-201ENST00000244763 N4BP3O15049 544 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 GAS8O95995 478 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 SLC9C2Q5TAH2 1124 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 LMBR1LQ6UX01 489 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 RASAL2Q9UJF2 1139 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 CCDC144CPQ8IYA2 1237 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 HAUS2Q9NVX0 235 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 BCCIPQ9P287 314 aaKnown RBP eCLIP8.35□□□□□ -1.07
SSR1-201ENST00000244763 CHPF2Q9P2E5 772 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 ZFYVE9O95405 1425 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 ABCC10Q5T3U5 1492 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 BIVM-ERCC5R4GMW8 1640 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 CTTNBP2Q8WZ74 1663 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 SLU7O95391 586 aaKnown RBP8.35□□□□□ -1.07
SSR1-201ENST00000244763 ARHGEF10LQ9HCE6 1279 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 USP25Q9UHP3 1055 aa8.35□□□□□ -1.07
SSR1-201ENST00000244763 UQCRHLA0A096LP55 91 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 UQCRHP07919 91 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms