RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 SETDB2Q96T68 719 aa11.26□□□□□ -0.61
EXOSC9-201ENST00000243498 BICC1Q9H694 974 aaKnown RBP11.26□□□□□ -0.61
EXOSC9-201ENST00000243498 TFCP2L1Q9NZI6 479 aa11.26□□□□□ -0.61
EXOSC9-201ENST00000243498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 PNMA6EA0A0J9YXQ4 647 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 PHF14O94880 888 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 NUCB1Q02818 461 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 OS9Q13438 667 aaPredicted RBP11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 CHD1LQ86WJ1 897 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 PCDHGA4Q9Y5G9 962 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 USP42Q9H9J4 1324 aaKnown RBP11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 MYH3P11055 1940 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 PDE8AO60658 829 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 NUDT7P0C024 238 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 TPTE2Q6XPS3 522 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 KIF1BPQ96EK5 621 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 LRRCC1Q9C099 1032 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 STK32BQ9NY57 414 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 NOP58Q9Y2X3 529 aaKnown RBP11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 CHMP3Q9Y3E7 222 aa11.25□□□□□ -0.61
EXOSC9-201ENST00000243498 C4AP0C0L4 1744 aa11.24□□□□□ -0.61
EXOSC9-201ENST00000243498 IRS4O14654 1257 aaPredicted RBP11.24□□□□□ -0.61
EXOSC9-201ENST00000243498 NPHP1O15259 732 aa11.24□□□□□ -0.61
EXOSC9-201ENST00000243498 CCDC57Q2TAC2 916 aa11.24□□□□□ -0.61
EXOSC9-201ENST00000243498 SUSD4Q5VX71 490 aa11.24□□□□□ -0.61
EXOSC9-201ENST00000243498 LMBR1LQ6UX01 489 aa11.24□□□□□ -0.61
EXOSC9-201ENST00000243498 FAM89AQ96GI7 184 aa11.24□□□□□ -0.61
EXOSC9-201ENST00000243498 KAZALD1Q96I82 304 aa11.24□□□□□ -0.61
EXOSC9-201ENST00000243498 RGS3P49796 1198 aa11.23□□□□□ -0.61
EXOSC9-201ENST00000243498 FOXO4P98177 505 aa11.23□□□□□ -0.61
EXOSC9-201ENST00000243498 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
EXOSC9-201ENST00000243498 RTL5Q5HYW3 569 aaPredicted RBP11.23□□□□□ -0.61
EXOSC9-201ENST00000243498 NLGN1Q8N2Q7 840 aa11.23□□□□□ -0.61
EXOSC9-201ENST00000243498 CAMKK2Q96RR4 588 aa11.23□□□□□ -0.61
EXOSC9-201ENST00000243498 COPRSQ9NQ92 184 aa11.23□□□□□ -0.61
EXOSC9-201ENST00000243498 UBN2Q6ZU65 1347 aa11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 ANKRD18BA2A2Z9 1011 aa11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 CSF1RP07333 972 aa11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 IFIT5Q13325 482 aaKnown RBP11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 EZH2Q15910 746 aaKnown RBP11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 TAF7LQ5H9L4 462 aa11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 TBC1D9BQ66K14 1250 aa11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 BICDL1Q6ZP65 573 aa11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 NBPF5PQ86XG9 351 aaPredicted RBP11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 CLASRPQ8N2M8 674 aaKnown RBP11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 LNPKQ9C0E8 428 aa11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 SRP68Q9UHB9 627 aaKnown RBP11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 EXOC6BQ9Y2D4 811 aa11.22□□□□□ -0.61
EXOSC9-201ENST00000243498 CARMIL3Q8ND23 1372 aa11.21□□□□□ -0.61
EXOSC9-201ENST00000243498 FAM177BA6PVY3 158 aa11.21□□□□□ -0.61
EXOSC9-201ENST00000243498 NTSR2O95665 410 aa11.21□□□□□ -0.61
EXOSC9-201ENST00000243498 FOXK1P85037 733 aa11.21□□□□□ -0.61
EXOSC9-201ENST00000243498 EPHA10Q5JZY3 1008 aa11.21□□□□□ -0.61
EXOSC9-201ENST00000243498 SLC10A5Q5PT55 438 aa11.21□□□□□ -0.61
EXOSC9-201ENST00000243498 RHPN1Q8TCX5 695 aa11.21□□□□□ -0.61
EXOSC9-201ENST00000243498 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
EXOSC9-201ENST00000243498 GPHNQ9NQX3 736 aaPredicted RBP11.21□□□□□ -0.61
EXOSC9-201ENST00000243498 LAMB2P55268 1798 aa11.21□□□□□ -0.62
EXOSC9-201ENST00000243498 QSER1Q2KHR3 1735 aa11.21□□□□□ -0.62
EXOSC9-201ENST00000243498 PTGER2P43116 358 aa11.2□□□□□ -0.62
EXOSC9-201ENST00000243498 CTSWP56202 376 aa11.2□□□□□ -0.62
EXOSC9-201ENST00000243498 SLC15A2Q16348 729 aa11.2□□□□□ -0.62
EXOSC9-201ENST00000243498 CCDC152Q4G0S7 254 aa11.2□□□□□ -0.62
EXOSC9-201ENST00000243498 NLRP3Q96P20 1036 aa11.2□□□□□ -0.62
EXOSC9-201ENST00000243498 APBB1O00213 710 aa11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 EIF5BO60841 1220 aaKnown RBP11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 CIAO1O76071 339 aa11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 GYS1P13807 737 aa11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 IL15P40933 162 aaPredicted RBP11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 ST5P78524 1137 aa11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 TTLL11Q8NHH1 800 aa11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 COL24A1Q17RW2 1714 aa11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 EYA2O00167 538 aa11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 PBX2P40425 430 aa11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 PTPN12Q05209 780 aaKnown RBP11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 NFIXQ14938 502 aa11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 ZNF827Q17R98 1081 aa11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 GPATCH3Q96I76 525 aa11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 CDC5LQ99459 802 aaKnown RBP11.19□□□□□ -0.62
EXOSC9-201ENST00000243498 ITGA6P23229 1130 aa11.18□□□□□ -0.62
EXOSC9-201ENST00000243498 IGHMBP2P38935 993 aaKnown RBP11.18□□□□□ -0.62
EXOSC9-201ENST00000243498 SF3B3Q15393 1217 aaKnown RBP11.18□□□□□ -0.62
EXOSC9-201ENST00000243498 COL23A1Q86Y22 540 aaPredicted RBP11.18□□□□□ -0.62
EXOSC9-201ENST00000243498 NUTM1Q86Y26 1132 aa11.18□□□□□ -0.62
EXOSC9-201ENST00000243498 PLPP6Q8IY26 295 aa11.18□□□□□ -0.62
EXOSC9-201ENST00000243498 CNBD1Q8NA66 436 aa11.18□□□□□ -0.62
EXOSC9-201ENST00000243498 PTCD2Q8WV60 388 aaKnown RBP11.18□□□□□ -0.62
EXOSC9-201ENST00000243498 RNF166Q96A37 237 aaPredicted RBP11.18□□□□□ -0.62
EXOSC9-201ENST00000243498 LHX6Q9UPM6 363 aa11.18□□□□□ -0.62
EXOSC9-201ENST00000243498 DDX60Q8IY21 1712 aaKnown RBP11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 RTL9Q8NET4 1388 aa11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 PSDA5PKW4 1024 aaPredicted RBP11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 SERPINB2P05120 415 aa11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 IFIT2P09913 472 aaKnown RBP11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 HCLS1P14317 486 aaPredicted RBP11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 TM4SF1P30408 202 aa11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 ERFEQ4G0M1 354 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms