RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 GYS2P54840 703 aa8.59□□□□□ -1.04
RIF1-201ENST00000243326 EZRP15311 586 aaKnown RBP8.58□□□□□ -1.04
RIF1-201ENST00000243326 USO1O60763 962 aaKnown RBP8.58□□□□□ -1.04
RIF1-201ENST00000243326 CWF19L2Q2TBE0 894 aaKnown RBP8.58□□□□□ -1.04
RIF1-201ENST00000243326 GNL3LQ9NVN8 582 aaKnown RBP8.58□□□□□ -1.04
RIF1-201ENST00000243326 PTPDC1A2A3K4 754 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 HSPA4P34932 840 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 AKR1B10O60218 316 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 NEMFO60524 1076 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 A0A1W2PRG0 241 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 MYRIPQ8NFW9 859 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 CCDC194A0A1B0GVG4 234 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 HELBQ8NG08 1087 aaPredicted RBP8.58□□□□□ -1.04
RIF1-201ENST00000243326 CCDC121Q6ZUS5 278 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 NCKAP5LQ9HCH0 1330 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 F8W031 263 aaPredicted RBP8.58□□□□□ -1.04
RIF1-201ENST00000243326 MCM7P33993 719 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 CCDC102BQ68D86 513 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 MICALCLQ6ZW33 695 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 PHACTR3Q96KR7 559 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 DIDO1Q9BTC0 2240 aaKnown RBP8.58□□□□□ -1.04
RIF1-201ENST00000243326 PTPRKQ15262 1439 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 ZNF75DP51815 510 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 UBXN1Q04323 297 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 DPH6Q7L8W6 267 aa8.58□□□□□ -1.04
RIF1-201ENST00000243326 CTNNA2P26232 953 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 ERCC5P28715 1186 aaPredicted RBP8.57□□□□□ -1.04
RIF1-201ENST00000243326 ANAPC15P60006 121 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 MIGA1Q8NAN2 632 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 MGARPQ8TDB4 240 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 STAT6P42226 847 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 ZNF174Q15697 407 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 WASF1Q92558 559 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 EVI5LQ96CN4 794 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 BMP2KQ9NSY1 1161 aaPredicted RBP8.57□□□□□ -1.04
RIF1-201ENST00000243326 ZSCAN25Q6NSZ9 544 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 FAM227BQ96M60 508 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 ABCC5O15440 1437 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 MYCNP04198 464 aaPredicted RBP8.57□□□□□ -1.04
RIF1-201ENST00000243326 ALDH1L2Q3SY69 923 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 WDR78Q5VTH9 848 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 CCDC97Q96F63 343 aaPredicted RBP8.57□□□□□ -1.04
RIF1-201ENST00000243326 PKD2L1Q9P0L9 805 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 A0A1B0GUL7 405 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 HDAC1Q13547 482 aaPredicted RBP8.57□□□□□ -1.04
RIF1-201ENST00000243326 EXOC1Q9NV70 894 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 CLGNO14967 610 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 SMC5Q8IY18 1101 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 ALS2CR12Q96Q35 445 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 CHRNA2Q15822 529 aa8.57□□□□□ -1.04
RIF1-201ENST00000243326 UAP1Q16222 522 aaPredicted RBP8.56□□□□□ -1.04
RIF1-201ENST00000243326 PLEKHH2Q8IVE3 1493 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 MTX1Q13505 466 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 SEC63Q9UGP8 760 aaKnown RBP8.56□□□□□ -1.04
RIF1-201ENST00000243326 ZBTB22O15209 634 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 NEBLO76041 1014 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 CD2BP2O95400 341 aaKnown RBP8.56□□□□□ -1.04
RIF1-201ENST00000243326 VIMP08670 466 aaKnown RBP8.56□□□□□ -1.04
RIF1-201ENST00000243326 GPT2Q8TD30 523 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 IRX5P78411 483 aaPredicted RBP8.56□□□□□ -1.04
RIF1-201ENST00000243326 JAK2O60674 1132 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 CTCFLQ8NI51 663 aaPredicted RBP8.56□□□□□ -1.04
RIF1-201ENST00000243326 ATP1A2P50993 1020 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 FBXO31Q5XUX0 539 aaPredicted RBP8.56□□□□□ -1.04
RIF1-201ENST00000243326 TRMT112Q9UI30 125 aaKnown RBP8.56□□□□□ -1.04
RIF1-201ENST00000243326 GBP6Q6ZN66 633 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 CDC37L1Q7L3B6 337 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 BEND3Q5T5X7 828 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 RPGRQ92834 1020 aaKnown RBP8.56□□□□□ -1.04
RIF1-201ENST00000243326 MRVI1Q9Y6F6 885 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 POLA1P09884 1462 aaPredicted RBP8.56□□□□□ -1.04
RIF1-201ENST00000243326 SPTLC2O15270 562 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 RAD51AP2Q09MP3 1159 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 TFCP2Q12800 502 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 ANKRD44Q8N8A2 993 aa8.56□□□□□ -1.04
RIF1-201ENST00000243326 TRIM21P19474 475 aaKnown RBP8.55□□□□□ -1.04
RIF1-201ENST00000243326 GUCY2FP51841 1108 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 ERCC6LQ2NKX8 1250 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 CREB3L3Q68CJ9 461 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 UHMK1Q8TAS1 419 aaKnown RBP8.55□□□□□ -1.04
RIF1-201ENST00000243326 ZBTB21Q9ULJ3 1066 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 CHMLP26374 656 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 SEC62Q99442 399 aaKnown RBP8.55□□□□□ -1.04
RIF1-201ENST00000243326 LIG3P49916 1009 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 CPLX4Q7Z7G2 160 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 NOS1P29475 1434 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 CTAGE5O15320 804 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 ADKP55263 362 aaKnown RBP8.55□□□□□ -1.04
RIF1-201ENST00000243326 SNX21Q969T3 373 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 PHAXQ9H814 394 aaKnown RBP8.55□□□□□ -1.04
RIF1-201ENST00000243326 PPP1R14CQ8TAE6 165 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 POTEB2H3BUK9 544 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 FGFR1OPO95684 399 aaKnown RBP8.55□□□□□ -1.04
RIF1-201ENST00000243326 AFAP1L1Q8TED9 768 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 UTP14CQ5TAP6 766 aaKnown RBP8.55□□□□□ -1.04
RIF1-201ENST00000243326 FAM76AQ8TAV0 307 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 SLF1Q9BQI6 1058 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 STK38LQ9Y2H1 464 aa8.55□□□□□ -1.04
RIF1-201ENST00000243326 ASIC1P78348 528 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 IFIT5Q13325 482 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms