RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 ANO2Q9NQ90 1003 aa10.39□□□□□ -0.75
CXCR4-201ENST00000241393 MYOM2P54296 1465 aa10.39□□□□□ -0.75
CXCR4-201ENST00000241393 BLMP54132 1417 aaPredicted RBP10.39□□□□□ -0.75
CXCR4-201ENST00000241393 SYNMO15061 1565 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 EIF3AQ14152 1382 aaKnown RBP10.38□□□□□ -0.75
CXCR4-201ENST00000241393 NPR3P17342 541 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 AAMPQ13685 434 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.38□□□□□ -0.75
CXCR4-201ENST00000241393 NOM1Q5C9Z4 860 aaKnown RBP10.38□□□□□ -0.75
CXCR4-201ENST00000241393 COX20Q5RI15 118 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 ZNF295-AS1Q8N0V1 137 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 QTRT2Q9H974 415 aaKnown RBP10.38□□□□□ -0.75
CXCR4-201ENST00000241393 SENP2Q9HC62 589 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 TIMMDC1Q9NPL8 285 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 PARP3Q9Y6F1 533 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 MROH1Q8NDA8 1641 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 SOS2Q07890 1332 aaPredicted RBP10.38□□□□□ -0.75
CXCR4-201ENST00000241393 NPC1L1Q9UHC9 1359 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 NDUFB5O43674 189 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 POU4F2Q12837 409 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 BICDL1Q6ZP65 573 aa10.38□□□□□ -0.75
CXCR4-201ENST00000241393 ZSCAN29Q8IWY8 852 aaPredicted RBP10.38□□□□□ -0.75
CXCR4-201ENST00000241393 ASXL2Q76L83 1435 aa10.37□□□□□ -0.75
CXCR4-201ENST00000241393 BMP1P13497 986 aa10.37□□□□□ -0.75
CXCR4-201ENST00000241393 CAPN12Q6ZSI9 719 aa10.37□□□□□ -0.75
CXCR4-201ENST00000241393 KIFC2Q96AC6 838 aa10.37□□□□□ -0.75
CXCR4-201ENST00000241393 IRX2Q9BZI1 471 aaPredicted RBP10.37□□□□□ -0.75
CXCR4-201ENST00000241393 PANK3Q9H999 370 aa10.37□□□□□ -0.75
CXCR4-201ENST00000241393 EFCAB6Q5THR3 1501 aa10.37□□□□□ -0.75
CXCR4-201ENST00000241393 CFAP74Q9C0B2 1584 aa10.36□□□□□ -0.75
CXCR4-201ENST00000241393 ZNF518AQ6AHZ1 1483 aa10.36□□□□□ -0.75
CXCR4-201ENST00000241393 MAN1A2O60476 641 aa10.36□□□□□ -0.75
CXCR4-201ENST00000241393 PCSK2P16519 638 aa10.36□□□□□ -0.75
CXCR4-201ENST00000241393 PHKA2P46019 1235 aa10.36□□□□□ -0.75
CXCR4-201ENST00000241393 TRIM46Q7Z4K8 759 aa10.36□□□□□ -0.75
CXCR4-201ENST00000241393 ZFP42Q96MM3 310 aa10.36□□□□□ -0.75
CXCR4-201ENST00000241393 DCTN4Q9UJW0 460 aa10.36□□□□□ -0.75
CXCR4-201ENST00000241393 DGKZQ13574 1117 aa10.35□□□□□ -0.75
CXCR4-201ENST00000241393 CNGB1Q14028 1251 aaPredicted RBP10.35□□□□□ -0.75
CXCR4-201ENST00000241393 PGBD3Q8N328 593 aa10.35□□□□□ -0.75
CXCR4-201ENST00000241393 CITED4Q96RK1 184 aa10.35□□□□□ -0.75
CXCR4-201ENST00000241393 BRPF3Q9ULD4 1205 aa10.35□□□□□ -0.75
CXCR4-201ENST00000241393 GJA3Q9Y6H8 435 aa10.35□□□□□ -0.75
CXCR4-201ENST00000241393 MAPK1P28482 360 aa10.34□□□□□ -0.75
CXCR4-201ENST00000241393 TTC16Q8NEE8 873 aa10.34□□□□□ -0.75
CXCR4-201ENST00000241393 IFT43Q96FT9 208 aa10.34□□□□□ -0.75
CXCR4-201ENST00000241393 SAP130Q9H0E3 1048 aa10.34□□□□□ -0.75
CXCR4-201ENST00000241393 ATP13A2Q9NQ11 1180 aa10.34□□□□□ -0.75
CXCR4-201ENST00000241393 KIDINS220Q9ULH0 1771 aa10.34□□□□□ -0.75
CXCR4-201ENST00000241393 MAP3K4Q9Y6R4 1608 aa10.34□□□□□ -0.75
CXCR4-201ENST00000241393 FIGNL2A6NMB9 653 aa10.34□□□□□ -0.75
CXCR4-201ENST00000241393 KIF3BO15066 747 aa10.34□□□□□ -0.75
CXCR4-201ENST00000241393 RPLP1P05386 114 aaKnown RBP10.34□□□□□ -0.75
CXCR4-201ENST00000241393 MPSTP25325 297 aa10.34□□□□□ -0.75
CXCR4-201ENST00000241393 ARSJQ5FYB0 599 aaPredicted RBP10.34□□□□□ -0.75
CXCR4-201ENST00000241393 BCL11AQ9H165 835 aa10.34□□□□□ -0.75
CXCR4-201ENST00000241393 NRXN1Q9ULB1 1477 aa10.34□□□□□ -0.75
CXCR4-201ENST00000241393 TXLNAP40222 546 aa10.33□□□□□ -0.76
CXCR4-201ENST00000241393 USP5P45974 858 aa10.33□□□□□ -0.76
CXCR4-201ENST00000241393 MTMR3Q13615 1198 aa10.33□□□□□ -0.76
CXCR4-201ENST00000241393 SH3PXD2AQ5TCZ1 1133 aa10.33□□□□□ -0.76
CXCR4-201ENST00000241393 DYRK1BQ9Y463 629 aa10.33□□□□□ -0.76
CXCR4-201ENST00000241393 SBNO2Q9Y2G9 1366 aa10.33□□□□□ -0.76
CXCR4-201ENST00000241393 PIK3C2GO75747 1445 aa10.33□□□□□ -0.76
CXCR4-201ENST00000241393 MLH3Q9UHC1 1453 aa10.32□□□□□ -0.76
CXCR4-201ENST00000241393 ASXL1Q8IXJ9 1541 aa10.32□□□□□ -0.76
CXCR4-201ENST00000241393 KIF1BO60333 1816 aa10.32□□□□□ -0.76
CXCR4-201ENST00000241393 RRP1P56182 461 aaKnown RBP10.32□□□□□ -0.76
CXCR4-201ENST00000241393 IER5Q5VY09 327 aa10.32□□□□□ -0.76
CXCR4-201ENST00000241393 KNSTRNQ9Y448 316 aa10.32□□□□□ -0.76
CXCR4-201ENST00000241393 IFT172Q9UG01 1749 aa10.32□□□□□ -0.76
CXCR4-201ENST00000241393 TNFRSF10BO14763 440 aa10.31□□□□□ -0.76
CXCR4-201ENST00000241393 RHOQP17081 205 aa10.31□□□□□ -0.76
CXCR4-201ENST00000241393 EIF1AXP47813 144 aaKnown RBP10.31□□□□□ -0.76
CXCR4-201ENST00000241393 CCDC136Q96JN2 1154 aa10.31□□□□□ -0.76
CXCR4-201ENST00000241393 AAASQ9NRG9 546 aa10.31□□□□□ -0.76
CXCR4-201ENST00000241393 RCAN3Q9UKA8 241 aa10.31□□□□□ -0.76
CXCR4-201ENST00000241393 SETBP1Q9Y6X0 1596 aa10.31□□□□□ -0.76
CXCR4-201ENST00000241393 MYO3AQ8NEV4 1616 aa10.31□□□□□ -0.76
CXCR4-201ENST00000241393 PPRC1Q5VV67 1664 aaKnown RBP10.31□□□□□ -0.76
CXCR4-201ENST00000241393 TGFBR3LH3BV60 316 aa10.31□□□□□ -0.76
CXCR4-201ENST00000241393 MSX1P28360 303 aa10.31□□□□□ -0.76
CXCR4-201ENST00000241393 CC2D1BQ5T0F9 858 aaKnown RBP10.31□□□□□ -0.76
CXCR4-201ENST00000241393 LRFN2Q9ULH4 789 aa10.31□□□□□ -0.76
CXCR4-201ENST00000241393 AMOTL2Q9Y2J4 779 aa10.31□□□□□ -0.76
CXCR4-201ENST00000241393 POGZQ7Z3K3 1410 aa10.3□□□□□ -0.76
CXCR4-201ENST00000241393 ADGRB3O60242 1522 aa10.3□□□□□ -0.76
CXCR4-201ENST00000241393 ABCA6Q8N139 1617 aa10.3□□□□□ -0.76
CXCR4-201ENST00000241393 KDM5AP29375 1690 aaKnown RBP10.3□□□□□ -0.76
CXCR4-201ENST00000241393 F11P03951 625 aa10.3□□□□□ -0.76
CXCR4-201ENST00000241393 ARHGAP4P98171 946 aa10.3□□□□□ -0.76
CXCR4-201ENST00000241393 LBRQ14739 615 aaKnown RBP10.3□□□□□ -0.76
CXCR4-201ENST00000241393 EFHC2Q5JST6 749 aa10.3□□□□□ -0.76
CXCR4-201ENST00000241393 RGS22Q8NE09 1264 aa10.3□□□□□ -0.76
CXCR4-201ENST00000241393 KLK14Q9P0G3 267 aa10.3□□□□□ -0.76
CXCR4-201ENST00000241393 MYOM1P52179 1685 aa10.3□□□□□ -0.76
CXCR4-201ENST00000241393 EPB42P16452 691 aa10.29□□□□□ -0.76
CXCR4-201ENST00000241393 PPP2R1AP30153 589 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 NLRP8Q86W28 1048 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 SUSD3Q96L08 255 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms