RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 PTF1AQ7RTS3 328 aa18.44■□□□□ 0.54
CTSD-201ENST00000236671 SPTLC3Q9NUV7 552 aa18.44■□□□□ 0.54
CTSD-201ENST00000236671 HMG20BQ9P0W2 317 aa18.44■□□□□ 0.54
CTSD-201ENST00000236671 EXOC5O00471 708 aa18.44■□□□□ 0.54
CTSD-201ENST00000236671 CCDC192P0DO97 292 aa18.44■□□□□ 0.54
CTSD-201ENST00000236671 FAM173BQ6P4H8 233 aa18.44■□□□□ 0.54
CTSD-201ENST00000236671 ZCRB1Q8TBF4 217 aaKnown RBP18.44■□□□□ 0.54
CTSD-201ENST00000236671 KDM6AO15550 1401 aaPredicted RBP18.44■□□□□ 0.54
CTSD-201ENST00000236671 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
CTSD-201ENST00000236671 VSIG10Q8N0Z9 540 aa18.43■□□□□ 0.54
CTSD-201ENST00000236671 COL15A1P39059 1388 aa18.43■□□□□ 0.54
CTSD-201ENST00000236671 TAF5LO75529 589 aa18.43■□□□□ 0.54
CTSD-201ENST00000236671 LIG1P18858 919 aa18.43■□□□□ 0.54
CTSD-201ENST00000236671 NEXNQ0ZGT2 675 aa18.43■□□□□ 0.54
CTSD-201ENST00000236671 SLC39A6Q13433 755 aa18.43■□□□□ 0.54
CTSD-201ENST00000236671 USPL1Q5W0Q7 1092 aa18.43■□□□□ 0.54
CTSD-201ENST00000236671 C17orf53Q8N3J3 647 aaPredicted RBP18.43■□□□□ 0.54
CTSD-201ENST00000236671 XAGE3Q8WTP9 111 aa18.43■□□□□ 0.54
CTSD-201ENST00000236671 SCN11AQ9UI33 1791 aa18.42■□□□□ 0.54
CTSD-201ENST00000236671 MYL6BP14649 208 aa18.42■□□□□ 0.54
CTSD-201ENST00000236671 MYRIPQ8NFW9 859 aa18.42■□□□□ 0.54
CTSD-201ENST00000236671 EDC3Q96F86 508 aaKnown RBP18.42■□□□□ 0.54
CTSD-201ENST00000236671 METTL22Q9BUU2 404 aaPredicted RBP18.42■□□□□ 0.54
CTSD-201ENST00000236671 DNTTIP2Q5QJE6 756 aaKnown RBP18.41■□□□□ 0.54
CTSD-201ENST00000236671 MYD88Q99836 296 aa18.41■□□□□ 0.54
CTSD-201ENST00000236671 NUP62CLQ9H1M0 184 aa18.41■□□□□ 0.54
CTSD-201ENST00000236671 SLC52A2Q9HAB3 445 aa18.41■□□□□ 0.54
CTSD-201ENST00000236671 COPRSQ9NQ92 184 aa18.41■□□□□ 0.54
CTSD-201ENST00000236671 RFX5P48382 616 aaPredicted RBP18.41■□□□□ 0.54
CTSD-201ENST00000236671 PLCB2Q00722 1185 aa18.41■□□□□ 0.54
CTSD-201ENST00000236671 MAP3K11Q16584 847 aa18.41■□□□□ 0.54
CTSD-201ENST00000236671 KRT27Q7Z3Y8 459 aa18.41■□□□□ 0.54
CTSD-201ENST00000236671 FAM200AQ8TCP9 573 aa18.41■□□□□ 0.54
CTSD-201ENST00000236671 ACSBG1Q96GR2 724 aa18.41■□□□□ 0.54
CTSD-201ENST00000236671 PRIMPOLQ96LW4 560 aa18.41■□□□□ 0.54
CTSD-201ENST00000236671 DBNLQ9UJU6 430 aaKnown RBP18.41■□□□□ 0.54
CTSD-201ENST00000236671 TOGARAM1Q9Y4F4 1720 aa18.4■□□□□ 0.54
CTSD-201ENST00000236671 ATP5JP18859 108 aa18.4■□□□□ 0.54
CTSD-201ENST00000236671 COPS6Q7L5N1 327 aa18.4■□□□□ 0.54
CTSD-201ENST00000236671 LRP10Q7Z4F1 713 aa18.4■□□□□ 0.54
CTSD-201ENST00000236671 KCNF1Q9H3M0 494 aa18.4■□□□□ 0.54
CTSD-201ENST00000236671 MRVI1Q9Y6F6 885 aa18.4■□□□□ 0.54
CTSD-201ENST00000236671 RFX7Q2KHR2 1363 aa18.4■□□□□ 0.54
CTSD-201ENST00000236671 SCAND2PQ9GZW5 306 aaPredicted RBP18.4■□□□□ 0.54
CTSD-201ENST00000236671 CHMP3Q9Y3E7 222 aa18.4■□□□□ 0.54
CTSD-201ENST00000236671 TYRO3Q06418 890 aa18.39■□□□□ 0.53
CTSD-201ENST00000236671 STK3Q13188 491 aa18.39■□□□□ 0.53
CTSD-201ENST00000236671 TNNI3KQ59H18 835 aa18.39■□□□□ 0.53
CTSD-201ENST00000236671 MTERF4Q7Z6M4 381 aaKnown RBP18.39■□□□□ 0.53
CTSD-201ENST00000236671 FPGT-TNNI3KV9GXZ4 949 aa18.39■□□□□ 0.53
CTSD-201ENST00000236671 DOT1LQ8TEK3 1739 aa18.39■□□□□ 0.53
CTSD-201ENST00000236671 KCNQ2O43526 872 aa18.38■□□□□ 0.53
CTSD-201ENST00000236671 PTPN12Q05209 780 aaKnown RBP18.38■□□□□ 0.53
CTSD-201ENST00000236671 KRT32Q14532 448 aa18.38■□□□□ 0.53
CTSD-201ENST00000236671 CAMK4Q16566 473 aa18.38■□□□□ 0.53
CTSD-201ENST00000236671 LEO1Q8WVC0 666 aaPredicted RBP18.38■□□□□ 0.53
CTSD-201ENST00000236671 GTF3C6Q969F1 213 aa18.38■□□□□ 0.53
CTSD-201ENST00000236671 ZNF609O15014 1411 aa18.38■□□□□ 0.53
CTSD-201ENST00000236671 PHKG2P15735 406 aa18.38■□□□□ 0.53
CTSD-201ENST00000236671 HMGN5P82970 282 aaKnown RBP18.38■□□□□ 0.53
CTSD-201ENST00000236671 TFCP2Q12800 502 aa18.38■□□□□ 0.53
CTSD-201ENST00000236671 KIAA1524Q8TCG1 905 aa18.38■□□□□ 0.53
CTSD-201ENST00000236671 SPATA32Q96LK8 384 aa18.38■□□□□ 0.53
CTSD-201ENST00000236671 DACT1Q9NYF0 836 aa18.38■□□□□ 0.53
CTSD-201ENST00000236671 SBF2Q86WG5 1849 aa18.38■□□□□ 0.53
CTSD-201ENST00000236671 JAK2O60674 1132 aa18.37■□□□□ 0.53
CTSD-201ENST00000236671 TPM3P06753 285 aa18.37■□□□□ 0.53
CTSD-201ENST00000236671 RABL6Q3YEC7 729 aaPredicted RBP18.37■□□□□ 0.53
CTSD-201ENST00000236671 RBM43Q6ZSC3 357 aaKnown RBP18.37■□□□□ 0.53
CTSD-201ENST00000236671 NFATC2IPQ8NCF5 419 aa18.37■□□□□ 0.53
CTSD-201ENST00000236671 ZNF496Q96IT1 587 aaPredicted RBP18.37■□□□□ 0.53
CTSD-201ENST00000236671 GTF2F1P35269 517 aaKnown RBP eCLIP18.37■□□□□ 0.535e-6■■■■□ 24.4
CTSD-201ENST00000236671 TFIP11Q9UBB9 837 aaKnown RBP18.37■□□□□ 0.53
CTSD-201ENST00000236671 PYCARDQ9ULZ3 195 aa18.37■□□□□ 0.53
CTSD-201ENST00000236671 PCDH11XQ9BZA7 1347 aa18.37■□□□□ 0.53
CTSD-201ENST00000236671 PCDH11YQ9BZA8 1340 aa18.37■□□□□ 0.53
CTSD-201ENST00000236671 GOLGB1Q14789 3259 aaKnown RBP18.36■□□□□ 0.53
CTSD-201ENST00000236671 ANKRD13DQ6ZTN6 518 aa18.36■□□□□ 0.53
CTSD-201ENST00000236671 SPC24Q8NBT2 197 aa18.36■□□□□ 0.53
CTSD-201ENST00000236671 JARID2Q92833 1246 aaPredicted RBP18.36■□□□□ 0.53
CTSD-201ENST00000236671 NEK1Q96PY6 1258 aa18.36■□□□□ 0.53
CTSD-201ENST00000236671 CDCA7Q9BWT1 371 aaPredicted RBP18.36■□□□□ 0.53
CTSD-201ENST00000236671 TNMDQ9H2S6 317 aa18.36■□□□□ 0.53
CTSD-201ENST00000236671 DDX19AQ9NUU7 478 aaKnown RBP18.36■□□□□ 0.53
CTSD-201ENST00000236671 NDUFB9Q9Y6M9 179 aa18.36■□□□□ 0.53
CTSD-201ENST00000236671 ITGB4P16144 1822 aa18.36■□□□□ 0.53
CTSD-201ENST00000236671 CHGBP05060 677 aa18.35■□□□□ 0.53
CTSD-201ENST00000236671 RESTQ13127 1097 aa18.35■□□□□ 0.53
CTSD-201ENST00000236671 CKAP2LQ8IYA6 745 aa18.35■□□□□ 0.53
CTSD-201ENST00000236671 SYTL4Q96C24 671 aaPredicted RBP18.35■□□□□ 0.53
CTSD-201ENST00000236671 CLSTN2Q9H4D0 955 aa18.35■□□□□ 0.53
CTSD-201ENST00000236671 AFDNP55196 1824 aaKnown RBP18.35■□□□□ 0.53
CTSD-201ENST00000236671 CCDC129Q6ZRS4 1044 aa18.35■□□□□ 0.53
CTSD-201ENST00000236671 LUZP1Q86V48 1076 aa18.35■□□□□ 0.53
CTSD-201ENST00000236671 PGBD1Q96JS3 809 aa18.35■□□□□ 0.53
CTSD-201ENST00000236671 U3KPZ7 1027 aaPredicted RBP18.35■□□□□ 0.53
CTSD-201ENST00000236671 ARFGEF2Q9Y6D5 1785 aa18.34■□□□□ 0.53
CTSD-201ENST00000236671 GOLGA6L4A6NEF3 574 aa18.34■□□□□ 0.53
CTSD-201ENST00000236671 GOLGA6L6A8MZA4 724 aa18.34■□□□□ 0.53
CTSD-201ENST00000236671 ANO6Q4KMQ2 910 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms