RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 NGLY1Q96IV0 654 aa17.29■□□□□ 0.36
PRKAB1-201ENST00000229328 BCL9LQ86UU0 1499 aa17.29■□□□□ 0.36
PRKAB1-201ENST00000229328 FAM177BA6PVY3 158 aa17.29■□□□□ 0.36
PRKAB1-201ENST00000229328 SUSD4Q5VX71 490 aa17.29■□□□□ 0.36
PRKAB1-201ENST00000229328 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
PRKAB1-201ENST00000229328 LDHAL6AQ6ZMR3 332 aa17.29■□□□□ 0.36
PRKAB1-201ENST00000229328 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
PRKAB1-201ENST00000229328 PDE8AO60658 829 aa17.28■□□□□ 0.36
PRKAB1-201ENST00000229328 PTMSP20962 102 aa17.28■□□□□ 0.36
PRKAB1-201ENST00000229328 SCARF1Q14162 830 aa17.28■□□□□ 0.36
PRKAB1-201ENST00000229328 SKOR2Q2VWA4 1001 aaPredicted RBP17.28■□□□□ 0.36
PRKAB1-201ENST00000229328 TCEANC2Q96MN5 208 aa17.28■□□□□ 0.36
PRKAB1-201ENST00000229328 LMBRD1Q9NUN5 540 aa17.28■□□□□ 0.36
PRKAB1-201ENST00000229328 AKAP2Q9Y2D5 859 aa17.28■□□□□ 0.36
PRKAB1-201ENST00000229328 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
PRKAB1-201ENST00000229328 METTL24Q5JXM2 366 aa17.28■□□□□ 0.36
PRKAB1-201ENST00000229328 RNF20Q5VTR2 975 aa17.28■□□□□ 0.36
PRKAB1-201ENST00000229328 CAMTA2O94983 1202 aa17.27■□□□□ 0.36
PRKAB1-201ENST00000229328 FKBP4Q02790 459 aaKnown RBP eCLIP17.27■□□□□ 0.36
PRKAB1-201ENST00000229328 GORABQ5T7V8 394 aa17.27■□□□□ 0.36
PRKAB1-201ENST00000229328 SH3TC1Q8TE82 1336 aa17.27■□□□□ 0.36
PRKAB1-201ENST00000229328 HCLS1P14317 486 aaPredicted RBP17.27■□□□□ 0.35
PRKAB1-201ENST00000229328 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.35
PRKAB1-201ENST00000229328 TTC39AQ5SRH9 613 aa17.27■□□□□ 0.35
PRKAB1-201ENST00000229328 MYH3P11055 1940 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 ST3GAL1Q11201 340 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 FSD2A1L4K1 749 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 PSMA5P28066 241 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 KCNQ4P56696 695 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 VPS72Q15906 364 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 ME3Q16798 604 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 TSGA10IPQ3SY00 556 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 ZMYM1Q5SVZ6 1142 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 PTF1AQ7RTS3 328 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 CCDC83Q8IWF9 413 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 BRPF3Q9ULD4 1205 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 RREB1Q92766 1687 aa17.26■□□□□ 0.35
PRKAB1-201ENST00000229328 ATP2B3Q16720 1220 aa17.25■□□□□ 0.35
PRKAB1-201ENST00000229328 BLOC1S2Q6QNY1 142 aa17.25■□□□□ 0.35
PRKAB1-201ENST00000229328 PI16Q6UXB8 463 aa17.25■□□□□ 0.35
PRKAB1-201ENST00000229328 VGLL2Q8N8G2 317 aa17.25■□□□□ 0.35
PRKAB1-201ENST00000229328 HMG20BQ9P0W2 317 aa17.25■□□□□ 0.35
PRKAB1-201ENST00000229328 TPCN1Q9ULQ1 816 aa17.25■□□□□ 0.35
PRKAB1-201ENST00000229328 DDX49Q9Y6V7 483 aaKnown RBP17.25■□□□□ 0.35
PRKAB1-201ENST00000229328 PRPF40AO75400 957 aaKnown RBP17.25■□□□□ 0.35
PRKAB1-201ENST00000229328 RPS6KB1P23443 525 aa17.25■□□□□ 0.35
PRKAB1-201ENST00000229328 HELLSQ9NRZ9 838 aa17.25■□□□□ 0.35
PRKAB1-201ENST00000229328 RNF113AO15541 343 aaKnown RBP17.24■□□□□ 0.35
PRKAB1-201ENST00000229328 CYP21A2P08686 494 aa17.24■□□□□ 0.35
PRKAB1-201ENST00000229328 NECAB1Q8N987 351 aa17.24■□□□□ 0.35
PRKAB1-201ENST00000229328 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
PRKAB1-201ENST00000229328 GOLGA6L3A6NEY3 463 aa17.24■□□□□ 0.35
PRKAB1-201ENST00000229328 SMARCC1Q92922 1105 aaPredicted RBP17.24■□□□□ 0.35
PRKAB1-201ENST00000229328 ZAP70P43403 619 aa17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 KLHL40Q2TBA0 621 aa17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 UBE2Q2Q8WVN8 375 aa17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 MAST3O60307 1309 aa17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 CICQ96RK0 1608 aaPredicted RBP17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 M0R2C6 588 aa17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 TOB2Q14106 344 aaPredicted RBP17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 FOXD4L6Q3SYB3 417 aaPredicted RBP17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 FOXD4L3Q6VB84 417 aaPredicted RBP17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 LINC00116Q8NCU8 138 aa17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 ZSCAN31Q96LW9 406 aaPredicted RBP17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 UTP14AQ9BVJ6 771 aaKnown RBP17.23■□□□□ 0.35
PRKAB1-201ENST00000229328 A0A0G2JLW4 131 aa17.22■□□□□ 0.35
PRKAB1-201ENST00000229328 HELBQ8NG08 1087 aaPredicted RBP17.22■□□□□ 0.35
PRKAB1-201ENST00000229328 OSBP2Q969R2 916 aa17.22■□□□□ 0.35
PRKAB1-201ENST00000229328 SH2B1Q9NRF2 756 aaPredicted RBP17.22■□□□□ 0.35
PRKAB1-201ENST00000229328 SMC3Q9UQE7 1217 aa17.22■□□□□ 0.35
PRKAB1-201ENST00000229328 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
PRKAB1-201ENST00000229328 SPEF2Q9C093 1822 aa17.22■□□□□ 0.35
PRKAB1-201ENST00000229328 SMIM5Q71RC9 77 aa17.22■□□□□ 0.35
PRKAB1-201ENST00000229328 FNBP4Q8N3X1 1017 aaPredicted RBP17.22■□□□□ 0.35
PRKAB1-201ENST00000229328 SEC31BQ9NQW1 1179 aa17.22■□□□□ 0.35
PRKAB1-201ENST00000229328 WDR33Q9C0J8 1336 aaKnown RBP17.21■□□□□ 0.35
PRKAB1-201ENST00000229328 PDE8BO95263 885 aa17.21■□□□□ 0.35
PRKAB1-201ENST00000229328 MCAMP43121 646 aa17.21■□□□□ 0.35
PRKAB1-201ENST00000229328 STOX1Q6ZVD7 989 aa17.21■□□□□ 0.35
PRKAB1-201ENST00000229328 NTSR2O95665 410 aa17.21■□□□□ 0.35
PRKAB1-201ENST00000229328 HSPD1P10809 573 aaKnown RBP17.21■□□□□ 0.35
PRKAB1-201ENST00000229328 SYT1P21579 422 aa17.21■□□□□ 0.35
PRKAB1-201ENST00000229328 GJB2P29033 226 aa17.21■□□□□ 0.35
PRKAB1-201ENST00000229328 GAS2L3Q86XJ1 694 aa17.21■□□□□ 0.35
PRKAB1-201ENST00000229328 NEK1Q96PY6 1258 aa17.21■□□□□ 0.35
PRKAB1-201ENST00000229328 XRCC6P12956 609 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRKAB1-201ENST00000229328 TICAM2Q86XR7 235 aa17.2■□□□□ 0.34
PRKAB1-201ENST00000229328 GPT2Q8TD30 523 aa17.2■□□□□ 0.34
PRKAB1-201ENST00000229328 DSCC1Q9BVC3 393 aa17.2■□□□□ 0.34
PRKAB1-201ENST00000229328 ALDH8A1Q9H2A2 487 aaPredicted RBP17.2■□□□□ 0.34
PRKAB1-201ENST00000229328 COL5A3P25940 1745 aaPredicted RBP17.2■□□□□ 0.34
PRKAB1-201ENST00000229328 NCLP19338 710 aaKnown RBP17.2■□□□□ 0.34
PRKAB1-201ENST00000229328 KRT32Q14532 448 aa17.2■□□□□ 0.34
PRKAB1-201ENST00000229328 PARP10Q53GL7 1025 aa17.2■□□□□ 0.34
PRKAB1-201ENST00000229328 FAM182BQ5T319 152 aa17.2■□□□□ 0.34
PRKAB1-201ENST00000229328 L1TD1Q5T7N2 865 aaKnown RBP17.2■□□□□ 0.34
PRKAB1-201ENST00000229328 AK7Q96M32 723 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms