RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 SH2D4AQ9H788 454 aa9.37□□□□□ -0.91
NANOG-201ENST00000229307 BCS1LQ9Y276 419 aa9.37□□□□□ -0.91
NANOG-201ENST00000229307 IFIT3O14879 490 aaKnown RBP9.37□□□□□ -0.91
NANOG-201ENST00000229307 STK3Q13188 491 aa9.37□□□□□ -0.91
NANOG-201ENST00000229307 PPP4R3AQ6IN85 833 aa9.37□□□□□ -0.91
NANOG-201ENST00000229307 WDR66Q8TBY9 1149 aa9.37□□□□□ -0.91
NANOG-201ENST00000229307 FAM13BQ9NYF5 915 aa9.37□□□□□ -0.91
NANOG-201ENST00000229307 TTC41PQ6P2S7 1318 aa9.37□□□□□ -0.91
NANOG-201ENST00000229307 MROH5Q6ZUA9 1318 aa9.37□□□□□ -0.91
NANOG-201ENST00000229307 GOLGA6L3A6NEY3 463 aa9.37□□□□□ -0.91
NANOG-201ENST00000229307 TBC1D22AQ8WUA7 517 aa9.37□□□□□ -0.91
NANOG-201ENST00000229307 CHD2O14647 1828 aaKnown RBP9.37□□□□□ -0.91
NANOG-201ENST00000229307 EYA2O00167 538 aa9.36□□□□□ -0.91
NANOG-201ENST00000229307 HDAC1Q13547 482 aaPredicted RBP9.36□□□□□ -0.91
NANOG-201ENST00000229307 PRPF40BQ6NWY9 871 aaKnown RBP9.36□□□□□ -0.91
NANOG-201ENST00000229307 TTC6Q86TZ1 520 aa9.36□□□□□ -0.91
NANOG-201ENST00000229307 PHAXQ9H814 394 aaKnown RBP9.36□□□□□ -0.91
NANOG-201ENST00000229307 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.36□□□□□ -0.91
NANOG-201ENST00000229307 HCLS1P14317 486 aaPredicted RBP9.36□□□□□ -0.91
NANOG-201ENST00000229307 CRKLP46109 303 aaKnown RBP9.36□□□□□ -0.91
NANOG-201ENST00000229307 TMTC2Q8N394 836 aa9.36□□□□□ -0.91
NANOG-201ENST00000229307 SLC4A4Q9Y6R1 1079 aa9.36□□□□□ -0.91
NANOG-201ENST00000229307 KIF1AQ12756 1690 aa9.36□□□□□ -0.91
NANOG-201ENST00000229307 H7C1D1 291 aa9.36□□□□□ -0.91
NANOG-201ENST00000229307 TSPY3P0CV98 308 aa9.36□□□□□ -0.91
NANOG-201ENST00000229307 TSPY8P0CW00 308 aa9.36□□□□□ -0.91
NANOG-201ENST00000229307 CASTP20810 708 aaKnown RBP9.36□□□□□ -0.91
NANOG-201ENST00000229307 SLC27A3Q5K4L6 730 aa9.36□□□□□ -0.91
NANOG-201ENST00000229307 NCOA7Q8NI08 942 aa9.36□□□□□ -0.91
NANOG-201ENST00000229307 SDF4Q9BRK5 362 aa9.36□□□□□ -0.91
NANOG-201ENST00000229307 BEGAINQ9BUH8 593 aa9.36□□□□□ -0.91
NANOG-201ENST00000229307 MSL1Q68DK7 614 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 ESR2Q92731 530 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 RAB34Q9BZG1 259 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 CDK12Q9NYV4 1490 aaPredicted RBP9.35□□□□□ -0.91
NANOG-201ENST00000229307 WDR33Q9C0J8 1336 aaKnown RBP9.35□□□□□ -0.91
NANOG-201ENST00000229307 GIGYF1O75420 1035 aaPredicted RBP9.35□□□□□ -0.91
NANOG-201ENST00000229307 PICALMQ13492 652 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 TSPYL6Q8N831 410 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 BICC1Q9H694 974 aaKnown RBP9.35□□□□□ -0.91
NANOG-201ENST00000229307 SH2B1Q9NRF2 756 aaPredicted RBP9.35□□□□□ -0.91
NANOG-201ENST00000229307 WWC3Q9ULE0 1092 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 NRXN1Q9ULB1 1477 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 PPIP5K2O43314 1243 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 KINO60870 393 aaKnown RBP9.35□□□□□ -0.91
NANOG-201ENST00000229307 ATP2B4P23634 1241 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 GNAQP50148 359 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 DNAI2Q9GZS0 605 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 CRB1P82279 1406 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 MAP3K15Q6ZN16 1313 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 STIM1Q13586 685 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 ARHGAP27Q6ZUM4 889 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 VSIG10Q8N0Z9 540 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 NOC3LQ8WTT2 800 aaKnown RBP9.35□□□□□ -0.91
NANOG-201ENST00000229307 PAG1Q9NWQ8 432 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 NCAPD2Q15021 1401 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 LETM1O95202 739 aaPredicted RBP9.35□□□□□ -0.91
NANOG-201ENST00000229307 SLC9C2Q5TAH2 1124 aa9.35□□□□□ -0.91
NANOG-201ENST00000229307 LARP1BQ659C4 914 aaKnown RBP9.35□□□□□ -0.91
NANOG-201ENST00000229307 UPF1Q92900 1129 aaKnown RBP eCLIP9.35□□□□□ -0.91
NANOG-201ENST00000229307 IQSEC3Q9UPP2 1182 aaPredicted RBP9.35□□□□□ -0.91
NANOG-201ENST00000229307 GOLGA8AA7E2F4 631 aa9.34□□□□□ -0.91
NANOG-201ENST00000229307 GOLGA8BA8MQT2 603 aa9.34□□□□□ -0.91
NANOG-201ENST00000229307 SSRP1Q08945 709 aaKnown RBP9.34□□□□□ -0.91
NANOG-201ENST00000229307 RPS8P62241 208 aaKnown RBP9.34□□□□□ -0.91
NANOG-201ENST00000229307 GRM1Q13255 1194 aa9.34□□□□□ -0.91
NANOG-201ENST00000229307 USPL1Q5W0Q7 1092 aa9.34□□□□□ -0.91
NANOG-201ENST00000229307 BAG4O95429 457 aaKnown RBP9.34□□□□□ -0.91
NANOG-201ENST00000229307 TMEM67Q5HYA8 995 aa9.34□□□□□ -0.91
NANOG-201ENST00000229307 CC2D2BQ6DHV5 1058 aa9.34□□□□□ -0.91
NANOG-201ENST00000229307 IL17REQ8NFR9 667 aa9.34□□□□□ -0.91
NANOG-201ENST00000229307 PICK1Q9NRD5 415 aa9.34□□□□□ -0.91
NANOG-201ENST00000229307 CFAP45Q9UL16 551 aa9.34□□□□□ -0.91
NANOG-201ENST00000229307 TRIM21P19474 475 aaKnown RBP9.34□□□□□ -0.92
NANOG-201ENST00000229307 HMGN5P82970 282 aaKnown RBP9.34□□□□□ -0.92
NANOG-201ENST00000229307 GCKRQ14397 625 aa9.34□□□□□ -0.92
NANOG-201ENST00000229307 LPIN2Q92539 896 aa9.34□□□□□ -0.92
NANOG-201ENST00000229307 PALLDQ8WX93 1383 aa9.33□□□□□ -0.92
NANOG-201ENST00000229307 ADRA2BP18089 450 aa9.33□□□□□ -0.92
NANOG-201ENST00000229307 TNFAIP1Q13829 316 aa9.33□□□□□ -0.92
NANOG-201ENST00000229307 KRT24Q2M2I5 525 aa9.33□□□□□ -0.92
NANOG-201ENST00000229307 MCMDC2Q4G0Z9 681 aa9.33□□□□□ -0.92
NANOG-201ENST00000229307 HELBQ8NG08 1087 aaPredicted RBP9.33□□□□□ -0.92
NANOG-201ENST00000229307 MAGEC2Q9UBF1 373 aaPredicted RBP9.33□□□□□ -0.92
NANOG-201ENST00000229307 DACH1Q9UI36 760 aa9.33□□□□□ -0.92
NANOG-201ENST00000229307 RNF113AO15541 343 aaKnown RBP9.33□□□□□ -0.92
NANOG-201ENST00000229307 TFCP2Q12800 502 aa9.33□□□□□ -0.92
NANOG-201ENST00000229307 TMEM266Q2M3C6 531 aa9.33□□□□□ -0.92
NANOG-201ENST00000229307 TRPM1Q7Z4N2 1603 aa9.33□□□□□ -0.92
NANOG-201ENST00000229307 K7ELQ4 463 aaPredicted RBP9.33□□□□□ -0.92
NANOG-201ENST00000229307 TRIM35Q9UPQ4 493 aa9.33□□□□□ -0.92
NANOG-201ENST00000229307 USP31Q70CQ4 1352 aa9.33□□□□□ -0.92
NANOG-201ENST00000229307 USP19O94966 1318 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 A0A0U1RQG5 324 aaPredicted RBP9.32□□□□□ -0.92
NANOG-201ENST00000229307 PCCAP05165 728 aaPredicted RBP9.32□□□□□ -0.92
NANOG-201ENST00000229307 CTSWP56202 376 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 TTC22Q5TAA0 569 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 ZBTB38Q8NAP3 1195 aaPredicted RBP9.32□□□□□ -0.92
NANOG-201ENST00000229307 ASAP1Q9ULH1 1129 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 KDRP35968 1356 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms