RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 CNTROBQ8N137 903 aa18.1■□□□□ 0.49
GPN3-201ENST00000228827 ZC3H12CQ9C0D7 883 aaKnown RBP18.1■□□□□ 0.49
GPN3-201ENST00000228827 PASKQ96RG2 1323 aa18.1■□□□□ 0.49
GPN3-201ENST00000228827 CCER2I3L3R5 266 aa18.09■□□□□ 0.49
GPN3-201ENST00000228827 ITGBL1O95965 494 aaPredicted RBP18.09■□□□□ 0.49
GPN3-201ENST00000228827 SLC4A10Q6U841 1118 aa18.09■□□□□ 0.49
GPN3-201ENST00000228827 USP50Q70EL3 339 aaPredicted RBP18.09■□□□□ 0.49
GPN3-201ENST00000228827 KCNQ5Q9NR82 932 aa18.09■□□□□ 0.49
GPN3-201ENST00000228827 ADARB2Q9NS39 739 aaKnown RBP18.09■□□□□ 0.49
GPN3-201ENST00000228827 ZBTB12Q9Y330 459 aaPredicted RBP18.09■□□□□ 0.49
GPN3-201ENST00000228827 G3V3G9 751 aa18.08■□□□□ 0.49
GPN3-201ENST00000228827 PSMD14O00487 310 aa18.08■□□□□ 0.49
GPN3-201ENST00000228827 FAM161AQ3B820 660 aa18.08■□□□□ 0.49
GPN3-201ENST00000228827 DCAF8Q5TAQ9 597 aa18.08■□□□□ 0.49
GPN3-201ENST00000228827 CDCA7LQ96GN5 454 aa18.08■□□□□ 0.49
GPN3-201ENST00000228827 PLA2G12BQ9BX93 195 aa18.08■□□□□ 0.49
GPN3-201ENST00000228827 CREBZFQ9NS37 354 aa18.08■□□□□ 0.49
GPN3-201ENST00000228827 XDHP47989 1333 aa18.08■□□□□ 0.49
GPN3-201ENST00000228827 SHTN1A0MZ66 631 aa18.07■□□□□ 0.48
GPN3-201ENST00000228827 ITGA6P23229 1130 aa18.07■□□□□ 0.48
GPN3-201ENST00000228827 SLFN5Q08AF3 891 aa18.07■□□□□ 0.48
GPN3-201ENST00000228827 ADAMTSL1Q8N6G6 1762 aa18.07■□□□□ 0.48
GPN3-201ENST00000228827 BSDC1Q9NW68 430 aaPredicted RBP18.07■□□□□ 0.48
GPN3-201ENST00000228827 RTL9Q8NET4 1388 aa18.07■□□□□ 0.48
GPN3-201ENST00000228827 WTIPA6NIX2 430 aaPredicted RBP18.07■□□□□ 0.48
GPN3-201ENST00000228827 IGHMBP2P38935 993 aaKnown RBP18.07■□□□□ 0.48
GPN3-201ENST00000228827 MKRN1Q9UHC7 482 aaKnown RBP18.07■□□□□ 0.48
GPN3-201ENST00000228827 MINPP1Q9UNW1 487 aa18.07■□□□□ 0.48
GPN3-201ENST00000228827 CSF1RP07333 972 aa18.06■□□□□ 0.48
GPN3-201ENST00000228827 ATP2B4P23634 1241 aa18.06■□□□□ 0.48
GPN3-201ENST00000228827 MICALL2Q8IY33 904 aa18.06■□□□□ 0.48
GPN3-201ENST00000228827 MRPL50Q8N5N7 158 aaKnown RBP18.06■□□□□ 0.48
GPN3-201ENST00000228827 JMYQ8N9B5 988 aa18.06■□□□□ 0.48
GPN3-201ENST00000228827 CNOT7Q9UIV1 285 aaKnown RBP18.06■□□□□ 0.48
GPN3-201ENST00000228827 CHMP3Q9Y3E7 222 aa18.06■□□□□ 0.48
GPN3-201ENST00000228827 TMEM88BA6NKF7 163 aa18.05■□□□□ 0.48
GPN3-201ENST00000228827 FMR1Q06787 632 aaKnown RBP eCLIP18.05■□□□□ 0.48
GPN3-201ENST00000228827 TRPM4Q8TD43 1214 aa18.05■□□□□ 0.48
GPN3-201ENST00000228827 SRCIN1Q9C0H9 1055 aa18.05■□□□□ 0.48
GPN3-201ENST00000228827 FOXO4P98177 505 aa18.04■□□□□ 0.48
GPN3-201ENST00000228827 MPHOSPH8Q99549 860 aa18.04■□□□□ 0.48
GPN3-201ENST00000228827 C9orf78Q9NZ63 289 aaPredicted RBP18.04■□□□□ 0.48
GPN3-201ENST00000228827 H7C1D1 291 aa18.03■□□□□ 0.48
GPN3-201ENST00000228827 GRM8O00222 908 aa18.03■□□□□ 0.48
GPN3-201ENST00000228827 TRAF5O00463 557 aa18.03■□□□□ 0.48
GPN3-201ENST00000228827 CCT4P50991 539 aaKnown RBP18.03■□□□□ 0.48
GPN3-201ENST00000228827 HIRAP54198 1017 aaPredicted RBP18.03■□□□□ 0.48
GPN3-201ENST00000228827 SSH1Q8WYL5 1049 aa18.03■□□□□ 0.48
GPN3-201ENST00000228827 ANKRD18BA2A2Z9 1011 aa18.02■□□□□ 0.48
GPN3-201ENST00000228827 ALDH1L1O75891 902 aa18.02■□□□□ 0.48
GPN3-201ENST00000228827 EPHA10Q5JZY3 1008 aa18.02■□□□□ 0.48
GPN3-201ENST00000228827 DPF2Q92785 391 aa18.02■□□□□ 0.48
GPN3-201ENST00000228827 RBM26Q5T8P6 1007 aaKnown RBP18.01■□□□□ 0.47
GPN3-201ENST00000228827 LMBR1LQ6UX01 489 aa18.01■□□□□ 0.47
GPN3-201ENST00000228827 SAMD7Q7Z3H4 446 aa18.01■□□□□ 0.47
GPN3-201ENST00000228827 VIL1P09327 827 aaKnown RBP18.01■□□□□ 0.47
GPN3-201ENST00000228827 RPS12P25398 132 aaKnown RBP18.01■□□□□ 0.47
GPN3-201ENST00000228827 IFIT5Q13325 482 aaKnown RBP18.01■□□□□ 0.47
GPN3-201ENST00000228827 TBC1D10BQ4KMP7 808 aaPredicted RBP18.01■□□□□ 0.47
GPN3-201ENST00000228827 EGFRP00533 1210 aa18■□□□□ 0.47
GPN3-201ENST00000228827 SUCLG2Q96I99 432 aa18■□□□□ 0.47
GPN3-201ENST00000228827 GLIS2Q9BZE0 524 aaPredicted RBP18■□□□□ 0.47
GPN3-201ENST00000228827 ANKRD2Q9GZV1 360 aa18■□□□□ 0.47
GPN3-201ENST00000228827 ABT1Q9ULW3 272 aaKnown RBP18■□□□□ 0.47
GPN3-201ENST00000228827 CNTNAP1P78357 1384 aa17.99■□□□□ 0.47
GPN3-201ENST00000228827 MED23Q9ULK4 1368 aa17.99■□□□□ 0.47
GPN3-201ENST00000228827 KLRK1P26718 216 aa17.99■□□□□ 0.47
GPN3-201ENST00000228827 CHRNDQ07001 517 aa17.99■□□□□ 0.47
GPN3-201ENST00000228827 TXNRD3Q86VQ6 643 aa17.99■□□□□ 0.47
GPN3-201ENST00000228827 TRMT2AQ8IZ69 625 aaKnown RBP17.99■□□□□ 0.47
GPN3-201ENST00000228827 ZNF594Q96JF6 807 aaPredicted RBP17.99■□□□□ 0.47
GPN3-201ENST00000228827 SMC4Q9NTJ3 1288 aa17.99■□□□□ 0.47
GPN3-201ENST00000228827 LEMD3Q9Y2U8 911 aa17.99■□□□□ 0.47
GPN3-201ENST00000228827 ZNF804BA4D1E1 1349 aa17.98■□□□□ 0.47
GPN3-201ENST00000228827 PTPRCP08575 1304 aa17.98■□□□□ 0.47
GPN3-201ENST00000228827 KCNJ4P48050 445 aa17.98■□□□□ 0.47
GPN3-201ENST00000228827 CCDC57Q2TAC2 916 aa17.98■□□□□ 0.47
GPN3-201ENST00000228827 TAF7LQ5H9L4 462 aa17.98■□□□□ 0.47
GPN3-201ENST00000228827 DIEXFQ68CQ4 756 aaKnown RBP17.98■□□□□ 0.47
GPN3-201ENST00000228827 RSBN1LQ6PCB5 846 aaPredicted RBP17.98■□□□□ 0.47
GPN3-201ENST00000228827 PODNQ7Z5L7 613 aa17.98■□□□□ 0.47
GPN3-201ENST00000228827 MIER1Q8N108 512 aa17.98■□□□□ 0.47
GPN3-201ENST00000228827 HELBQ8NG08 1087 aaPredicted RBP17.98■□□□□ 0.47
GPN3-201ENST00000228827 FBXW7Q969H0 707 aa17.98■□□□□ 0.47
GPN3-201ENST00000228827 PGAP2Q9UHJ9 254 aa17.98■□□□□ 0.47
GPN3-201ENST00000228827 SPEF2Q9C093 1822 aa17.97■□□□□ 0.47
GPN3-201ENST00000228827 MYH3P11055 1940 aa17.97■□□□□ 0.47
GPN3-201ENST00000228827 SNAP23O00161 211 aa17.97■□□□□ 0.47
GPN3-201ENST00000228827 TAF5LO75529 589 aa17.97■□□□□ 0.47
GPN3-201ENST00000228827 NBPF7P0C2Y1 421 aaPredicted RBP17.97■□□□□ 0.47
GPN3-201ENST00000228827 VEGFBP49765 207 aa17.97■□□□□ 0.47
GPN3-201ENST00000228827 ALDH1L2Q3SY69 923 aa17.97■□□□□ 0.47
GPN3-201ENST00000228827 ZC3H15Q8WU90 426 aaKnown RBP17.97■□□□□ 0.47
GPN3-201ENST00000228827 CACNA1FO60840 1977 aa17.96■□□□□ 0.47
GPN3-201ENST00000228827 USP17L3A6NCW0 530 aa17.96■□□□□ 0.47
GPN3-201ENST00000228827 USP17L4A6NCW7 530 aa17.96■□□□□ 0.47
GPN3-201ENST00000228827 CST9Q5W186 159 aa17.96■□□□□ 0.47
GPN3-201ENST00000228827 USP17L1Q7RTZ2 530 aa17.96■□□□□ 0.47
GPN3-201ENST00000228827 USP48Q86UV5 1035 aa17.96■□□□□ 0.47
GPN3-201ENST00000228827 ZNF408Q9H9D4 720 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms