RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 RBM6P78332 1123 aaKnown RBP16.81■□□□□ 0.28
PRDM4-201ENST00000228437 PPP2R3AQ06190 1150 aa16.81■□□□□ 0.28
PRDM4-201ENST00000228437 TAF6LQ9Y6J9 622 aa16.81■□□□□ 0.28
PRDM4-201ENST00000228437 ERLIN1O75477 346 aa16.81■□□□□ 0.28
PRDM4-201ENST00000228437 ST5P78524 1137 aa16.81■□□□□ 0.28
PRDM4-201ENST00000228437 IQGAP3Q86VI3 1631 aa16.81■□□□□ 0.28
PRDM4-201ENST00000228437 SPECC1Q5M775 1068 aa16.81■□□□□ 0.28
PRDM4-201ENST00000228437 MRFAP1L1Q96HT8 127 aa16.81■□□□□ 0.28
PRDM4-201ENST00000228437 TLR7Q9NYK1 1049 aaKnown RBP16.81■□□□□ 0.28
PRDM4-201ENST00000228437 ETF1P62495 437 aaKnown RBP16.81■□□□□ 0.28
PRDM4-201ENST00000228437 CHMP4CQ96CF2 233 aa16.81■□□□□ 0.28
PRDM4-201ENST00000228437 PCMTD1Q96MG8 357 aaPredicted RBP16.81■□□□□ 0.28
PRDM4-201ENST00000228437 TTC21BQ7Z4L5 1316 aa16.8■□□□□ 0.28
PRDM4-201ENST00000228437 NOC3LQ8WTT2 800 aaKnown RBP16.8■□□□□ 0.28
PRDM4-201ENST00000228437 ZNF589Q86UQ0 364 aaPredicted RBP16.8■□□□□ 0.28
PRDM4-201ENST00000228437 CNNM3Q8NE01 707 aa16.8■□□□□ 0.28
PRDM4-201ENST00000228437 SMARCE1Q969G3 411 aa16.8■□□□□ 0.28
PRDM4-201ENST00000228437 HINFPQ9BQA5 517 aa16.8■□□□□ 0.28
PRDM4-201ENST00000228437 KIF24Q5T7B8 1368 aa16.8■□□□□ 0.28
PRDM4-201ENST00000228437 GOLGA8BA8MQT2 603 aa16.8■□□□□ 0.28
PRDM4-201ENST00000228437 RRP12Q5JTH9 1297 aaKnown RBP16.8■□□□□ 0.28
PRDM4-201ENST00000228437 RBM33Q96EV2 1170 aaKnown RBP16.8■□□□□ 0.28
PRDM4-201ENST00000228437 ATP5J2-PTCD1G3V325 749 aa16.79■□□□□ 0.28
PRDM4-201ENST00000228437 KCNQ3O43525 872 aa16.79■□□□□ 0.28
PRDM4-201ENST00000228437 PTCD1O75127 700 aaKnown RBP16.79■□□□□ 0.28
PRDM4-201ENST00000228437 SYKP43405 635 aa16.79■□□□□ 0.28
PRDM4-201ENST00000228437 ADKP55263 362 aaKnown RBP16.79■□□□□ 0.28
PRDM4-201ENST00000228437 EAF2Q96CJ1 260 aaPredicted RBP16.79■□□□□ 0.28
PRDM4-201ENST00000228437 ATP1A3P13637 1013 aa16.79■□□□□ 0.28
PRDM4-201ENST00000228437 MYD88Q99836 296 aa16.79■□□□□ 0.28
PRDM4-201ENST00000228437 NPATQ14207 1427 aa16.79■□□□□ 0.28
PRDM4-201ENST00000228437 SPTLC2O15270 562 aa16.79■□□□□ 0.28
PRDM4-201ENST00000228437 CSB-PGBD3P0DP91 1061 aa16.79■□□□□ 0.28
PRDM4-201ENST00000228437 ACBD3Q9H3P7 528 aa16.79■□□□□ 0.28
PRDM4-201ENST00000228437 SSH2Q76I76 1423 aa16.79■□□□□ 0.28
PRDM4-201ENST00000228437 LAMC1P11047 1609 aa16.79■□□□□ 0.28
PRDM4-201ENST00000228437 TTC41PQ6P2S7 1318 aa16.78■□□□□ 0.28
PRDM4-201ENST00000228437 LRRC7Q96NW7 1537 aa16.78■□□□□ 0.28
PRDM4-201ENST00000228437 PATL2C9JE40 543 aaKnown RBP16.78■□□□□ 0.28
PRDM4-201ENST00000228437 HOOK1Q9UJC3 728 aaKnown RBP16.78■□□□□ 0.28
PRDM4-201ENST00000228437 MED14O60244 1454 aa16.78■□□□□ 0.28
PRDM4-201ENST00000228437 CHGBP05060 677 aa16.78■□□□□ 0.28
PRDM4-201ENST00000228437 STX17P56962 302 aa16.78■□□□□ 0.28
PRDM4-201ENST00000228437 FKBP15Q5T1M5 1219 aa16.78■□□□□ 0.28
PRDM4-201ENST00000228437 KIF5CO60282 957 aa16.78■□□□□ 0.28
PRDM4-201ENST00000228437 MTX1Q13505 466 aa16.78■□□□□ 0.28
PRDM4-201ENST00000228437 SYCP1Q15431 976 aa16.78■□□□□ 0.28
PRDM4-201ENST00000228437 TSR1Q2NL82 804 aaKnown RBP16.78■□□□□ 0.28
PRDM4-201ENST00000228437 MICALL1Q8N3F8 863 aa16.78■□□□□ 0.28
PRDM4-201ENST00000228437 CENPHQ9H3R5 247 aa16.78■□□□□ 0.28
PRDM4-201ENST00000228437 NDUFA8P51970 172 aa16.77■□□□□ 0.28
PRDM4-201ENST00000228437 COL9A3Q14050 684 aaPredicted RBP16.77■□□□□ 0.28
PRDM4-201ENST00000228437 LONRF3Q496Y0 759 aa16.77■□□□□ 0.28
PRDM4-201ENST00000228437 EPB41L2O43491 1005 aaKnown RBP16.77■□□□□ 0.28
PRDM4-201ENST00000228437 DNAJC21Q5F1R6 531 aaKnown RBP16.77■□□□□ 0.28
PRDM4-201ENST00000228437 BICC1Q9H694 974 aaKnown RBP16.77■□□□□ 0.28
PRDM4-201ENST00000228437 GJB4Q9NTQ9 266 aa16.77■□□□□ 0.28
PRDM4-201ENST00000228437 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
PRDM4-201ENST00000228437 SLFNL1Q499Z3 407 aa16.77■□□□□ 0.27
PRDM4-201ENST00000228437 GOLPH3LQ9H4A5 285 aa16.76■□□□□ 0.27
PRDM4-201ENST00000228437 TRMT44Q8IYL2 757 aaKnown RBP16.76■□□□□ 0.27
PRDM4-201ENST00000228437 GOLGA1Q92805 767 aa16.76■□□□□ 0.27
PRDM4-201ENST00000228437 TM6SF1Q9BZW5 370 aa16.76■□□□□ 0.27
PRDM4-201ENST00000228437 LGR6Q9HBX8 967 aa16.76■□□□□ 0.27
PRDM4-201ENST00000228437 UNC13BO14795 1591 aa16.76■□□□□ 0.27
PRDM4-201ENST00000228437 KLF18A0A0U1RQI7 1052 aa16.76■□□□□ 0.27
PRDM4-201ENST00000228437 WWC2Q6AWC2 1192 aa16.76■□□□□ 0.27
PRDM4-201ENST00000228437 PCDHA7Q9UN72 937 aa16.76■□□□□ 0.27
PRDM4-201ENST00000228437 SETQ01105 290 aaPredicted RBP16.75■□□□□ 0.27
PRDM4-201ENST00000228437 ZNF569Q5MCW4 686 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 HMG20BQ9P0W2 317 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 SCRN1Q12765 414 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 TTC31Q49AM3 519 aaPredicted RBP16.75■□□□□ 0.27
PRDM4-201ENST00000228437 UBE3BQ7Z3V4 1068 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 BAG1Q99933 345 aaPredicted RBP16.75■□□□□ 0.27
PRDM4-201ENST00000228437 CEP152O94986 1710 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 ABCA6Q8N139 1617 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 ZNF202O95125 648 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 MNAT1P51948 309 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 NECTIN1Q15223 517 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 E2F4Q16254 413 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 PDE11AQ9HCR9 933 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 IQGAP1P46940 1657 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 DHX16O60231 1041 aaKnown RBP16.75■□□□□ 0.27
PRDM4-201ENST00000228437 WDHD1O75717 1129 aaPredicted RBP16.75■□□□□ 0.27
PRDM4-201ENST00000228437 CCZ1BP86790 482 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 CCZ1P86791 482 aaPredicted RBP16.75■□□□□ 0.27
PRDM4-201ENST00000228437 MICU3Q86XE3 530 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 JMYQ8N9B5 988 aa16.75■□□□□ 0.27
PRDM4-201ENST00000228437 ELP1O95163 1332 aa16.74■□□□□ 0.27
PRDM4-201ENST00000228437 MYO1CO00159 1063 aa16.74■□□□□ 0.27
PRDM4-201ENST00000228437 LRRFIP1Q32MZ4 808 aaKnown RBP16.74■□□□□ 0.27
PRDM4-201ENST00000228437 IL17REQ8NFR9 667 aa16.74■□□□□ 0.27
PRDM4-201ENST00000228437 KIAA1468Q9P260 1216 aa16.74■□□□□ 0.27
PRDM4-201ENST00000228437 DBF4Q9UBU7 674 aaPredicted RBP16.74■□□□□ 0.27
PRDM4-201ENST00000228437 MAP3K4Q9Y6R4 1608 aa16.74■□□□□ 0.27
PRDM4-201ENST00000228437 E4F1Q66K89 784 aaPredicted RBP16.74■□□□□ 0.27
PRDM4-201ENST00000228437 SMARCC1Q92922 1105 aaPredicted RBP16.74■□□□□ 0.27
PRDM4-201ENST00000228437 RUFY1Q96T51 708 aa16.74■□□□□ 0.27
PRDM4-201ENST00000228437 SAFBQ15424 915 aaKnown RBP eCLIP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms