RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 MTMR6Q9Y217 621 aa15.9■□□□□ 0.14
RAB3D-201ENST00000222120 PTPRUQ92729 1446 aa15.9■□□□□ 0.14
RAB3D-201ENST00000222120 CDC42BPGQ6DT37 1551 aa15.9■□□□□ 0.14
RAB3D-201ENST00000222120 IL2RBP14784 551 aa15.9■□□□□ 0.14
RAB3D-201ENST00000222120 RAI14Q9P0K7 980 aa15.9■□□□□ 0.14
RAB3D-201ENST00000222120 PTPDC1A2A3K4 754 aa15.89■□□□□ 0.13
RAB3D-201ENST00000222120 IGKV5-2P06315 115 aa15.89■□□□□ 0.13
RAB3D-201ENST00000222120 SLC9C2Q5TAH2 1124 aa15.89■□□□□ 0.13
RAB3D-201ENST00000222120 NAPBQ9H115 298 aa15.89■□□□□ 0.13
RAB3D-201ENST00000222120 CLIP2Q9UDT6 1046 aa15.89■□□□□ 0.13
RAB3D-201ENST00000222120 ERBB3P21860 1342 aa15.89■□□□□ 0.13
RAB3D-201ENST00000222120 LRRC24Q50LG9 513 aa15.89■□□□□ 0.13
RAB3D-201ENST00000222120 CCDC186Q7Z3E2 898 aa15.89■□□□□ 0.13
RAB3D-201ENST00000222120 TRMT1Q9NXH9 659 aaKnown RBP15.89■□□□□ 0.13
RAB3D-201ENST00000222120 TPM3P06753 285 aa15.89■□□□□ 0.13
RAB3D-201ENST00000222120 ZSCAN25Q6NSZ9 544 aa15.89■□□□□ 0.13
RAB3D-201ENST00000222120 DHX32Q7L7V1 743 aaKnown RBP15.89■□□□□ 0.13
RAB3D-201ENST00000222120 ERCC4Q92889 916 aaPredicted RBP15.89■□□□□ 0.13
RAB3D-201ENST00000222120 ACSBG1Q96GR2 724 aa15.89■□□□□ 0.13
RAB3D-201ENST00000222120 ZSWIM6Q9HCJ5 1215 aa15.88■□□□□ 0.13
RAB3D-201ENST00000222120 DLC1Q96QB1 1528 aa15.88■□□□□ 0.13
RAB3D-201ENST00000222120 RGS12O14924 1447 aa15.88■□□□□ 0.13
RAB3D-201ENST00000222120 FAM177A1Q8N128 213 aaPredicted RBP15.88■□□□□ 0.13
RAB3D-201ENST00000222120 SIGLEC1Q9BZZ2 1709 aa15.88■□□□□ 0.13
RAB3D-201ENST00000222120 EYA2O00167 538 aa15.88■□□□□ 0.13
RAB3D-201ENST00000222120 NOLC1Q14978 699 aaKnown RBP eCLIP15.88■□□□□ 0.13
RAB3D-201ENST00000222120 TTLL5Q6EMB2 1281 aa15.88■□□□□ 0.13
RAB3D-201ENST00000222120 SERPINC1P01008 464 aa15.88■□□□□ 0.13
RAB3D-201ENST00000222120 PDIA4P13667 645 aaKnown RBP15.88■□□□□ 0.13
RAB3D-201ENST00000222120 FAM200AQ8TCP9 573 aa15.88■□□□□ 0.13
RAB3D-201ENST00000222120 PRDM10Q9NQV6 1147 aa15.88■□□□□ 0.13
RAB3D-201ENST00000222120 NOL7Q9UMY1 257 aaKnown RBP15.88■□□□□ 0.13
RAB3D-201ENST00000222120 MYO5BQ9ULV0 1848 aa15.88■□□□□ 0.13
RAB3D-201ENST00000222120 LIG1P18858 919 aa15.87■□□□□ 0.13
RAB3D-201ENST00000222120 UVSSAQ2YD98 709 aa15.87■□□□□ 0.13
RAB3D-201ENST00000222120 OLFM4Q6UX06 510 aa15.87■□□□□ 0.13
RAB3D-201ENST00000222120 DNAJC10Q8IXB1 793 aa15.87■□□□□ 0.13
RAB3D-201ENST00000222120 ADGRB2O60241 1585 aa15.87■□□□□ 0.13
RAB3D-201ENST00000222120 EXOC5O00471 708 aa15.87■□□□□ 0.13
RAB3D-201ENST00000222120 RNF113AO15541 343 aaKnown RBP15.87■□□□□ 0.13
RAB3D-201ENST00000222120 OFD1O75665 1012 aa15.87■□□□□ 0.13
RAB3D-201ENST00000222120 CHGBP05060 677 aa15.87■□□□□ 0.13
RAB3D-201ENST00000222120 MARCKSP29966 332 aaPredicted RBP15.87■□□□□ 0.13
RAB3D-201ENST00000222120 KBTBD3Q8NAB2 608 aa15.87■□□□□ 0.13
RAB3D-201ENST00000222120 NACAP1Q9BZK3 213 aa15.87■□□□□ 0.13
RAB3D-201ENST00000222120 RAD21O60216 631 aa15.87■□□□□ 0.13
RAB3D-201ENST00000222120 PUS3Q9BZE2 481 aaKnown RBP15.87■□□□□ 0.13
RAB3D-201ENST00000222120 IFIT3O14879 490 aaKnown RBP15.86■□□□□ 0.13
RAB3D-201ENST00000222120 PRC1O43663 620 aa15.86■□□□□ 0.13
RAB3D-201ENST00000222120 MAP4K1Q92918 833 aa15.86■□□□□ 0.13
RAB3D-201ENST00000222120 PPP1R9BQ96SB3 815 aa15.86■□□□□ 0.13
RAB3D-201ENST00000222120 SSH2Q76I76 1423 aa15.86■□□□□ 0.13
RAB3D-201ENST00000222120 SLC4A8Q2Y0W8 1093 aa15.86■□□□□ 0.13
RAB3D-201ENST00000222120 TTC6Q86TZ1 520 aa15.86■□□□□ 0.13
RAB3D-201ENST00000222120 TRIM22Q8IYM9 498 aa15.86■□□□□ 0.13
RAB3D-201ENST00000222120 ATP5JP18859 108 aa15.86■□□□□ 0.13
RAB3D-201ENST00000222120 HSP90AA4PQ58FG1 418 aa15.86■□□□□ 0.13
RAB3D-201ENST00000222120 ADCY9O60503 1353 aa15.85■□□□□ 0.13
RAB3D-201ENST00000222120 PTGS1P23219 599 aa15.85■□□□□ 0.13
RAB3D-201ENST00000222120 MCM5P33992 734 aa15.85■□□□□ 0.13
RAB3D-201ENST00000222120 MTERF4Q7Z6M4 381 aaKnown RBP15.85■□□□□ 0.13
RAB3D-201ENST00000222120 NCOA7Q8NI08 942 aa15.85■□□□□ 0.13
RAB3D-201ENST00000222120 DDIT3P35638 169 aa15.85■□□□□ 0.13
RAB3D-201ENST00000222120 TM6SF1Q9BZW5 370 aa15.85■□□□□ 0.13
RAB3D-201ENST00000222120 ZSCAN16Q9H4T2 348 aaPredicted RBP15.85■□□□□ 0.13
RAB3D-201ENST00000222120 TAF5LO75529 589 aa15.85■□□□□ 0.13
RAB3D-201ENST00000222120 IGHMBP2P38935 993 aaKnown RBP15.85■□□□□ 0.13
RAB3D-201ENST00000222120 UBAC1Q9BSL1 405 aa15.85■□□□□ 0.13
RAB3D-201ENST00000222120 JMYQ8N9B5 988 aa15.85■□□□□ 0.13
RAB3D-201ENST00000222120 PIP4K2BP78356 416 aa15.84■□□□□ 0.13
RAB3D-201ENST00000222120 CEP170BQ9Y4F5 1589 aaPredicted RBP15.84■□□□□ 0.13
RAB3D-201ENST00000222120 CYP27B1O15528 508 aa15.84■□□□□ 0.13
RAB3D-201ENST00000222120 LEO1Q8WVC0 666 aaPredicted RBP15.84■□□□□ 0.13
RAB3D-201ENST00000222120 ANO10Q9NW15 660 aa15.84■□□□□ 0.13
RAB3D-201ENST00000222120 XAGE2Q96GT9 111 aa15.84■□□□□ 0.13
RAB3D-201ENST00000222120 GOLGA8AA7E2F4 631 aa15.83■□□□□ 0.13
RAB3D-201ENST00000222120 PTPN12Q05209 780 aaKnown RBP15.83■□□□□ 0.13
RAB3D-201ENST00000222120 MAP3K12Q12852 859 aa15.83■□□□□ 0.13
RAB3D-201ENST00000222120 TMEM67Q5HYA8 995 aa15.83■□□□□ 0.13
RAB3D-201ENST00000222120 HOOK1Q9UJC3 728 aaKnown RBP15.83■□□□□ 0.13
RAB3D-201ENST00000222120 A0A1B0GVL5 298 aa15.83■□□□□ 0.12
RAB3D-201ENST00000222120 METAP2P50579 478 aaKnown RBP eCLIP15.83■□□□□ 0.12
RAB3D-201ENST00000222120 CCDC112Q8NEF3 446 aa15.83■□□□□ 0.12
RAB3D-201ENST00000222120 TSC1Q92574 1164 aa15.83■□□□□ 0.12
RAB3D-201ENST00000222120 IRS4O14654 1257 aaPredicted RBP15.83■□□□□ 0.12
RAB3D-201ENST00000222120 CYP21A2P08686 494 aa15.83■□□□□ 0.12
RAB3D-201ENST00000222120 BTG4Q9NY30 223 aa15.83■□□□□ 0.12
RAB3D-201ENST00000222120 CDKL5O76039 1030 aa15.82■□□□□ 0.12
RAB3D-201ENST00000222120 CYP2E1P05181 493 aaPredicted RBP15.82■□□□□ 0.12
RAB3D-201ENST00000222120 ZAP70P43403 619 aa15.82■□□□□ 0.12
RAB3D-201ENST00000222120 NECTIN1Q15223 517 aa15.82■□□□□ 0.12
RAB3D-201ENST00000222120 SLC12A7Q9Y666 1083 aa15.82■□□□□ 0.12
RAB3D-201ENST00000222120 SLC26A6Q9BXS9 759 aa15.82■□□□□ 0.12
RAB3D-201ENST00000222120 COPRSQ9NQ92 184 aa15.82■□□□□ 0.12
RAB3D-201ENST00000222120 PCDH11XQ9BZA7 1347 aa15.82■□□□□ 0.12
RAB3D-201ENST00000222120 PCDH11YQ9BZA8 1340 aa15.82■□□□□ 0.12
RAB3D-201ENST00000222120 TMEM94Q12767 1356 aa15.82■□□□□ 0.12
RAB3D-201ENST00000222120 ZNF771Q7L3S4 317 aaPredicted RBP15.82■□□□□ 0.12
RAB3D-201ENST00000222120 USP32Q8NFA0 1604 aa15.82■□□□□ 0.12
RAB3D-201ENST00000222120 AK9Q5TCS8 1911 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms